ID   FJ009238; SV 1; circular; genomic DNA; STD; VRL; 1111 BP.
XX
AC   FJ009238;
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DT   24-SEP-2008 (Rel. 97, Created)
DT   24-SEP-2008 (Rel. 97, Last updated, Version 1)
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DE   Banana bunchy top virus isolate Kerala 1 segment DNA-1, complete sequence.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1111
RA   Martin K.P., Madassery J.;
RT   "Cloning and sequencing of Banana bunchy top virus genes infecting Quintal
RT   Nendran cultivar of Kerala, India";
RL   Unpublished.
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RN   [2]
RP   1-1111
RA   Martin K.P., Madassery J.;
RT   ;
RL   Submitted (11-AUG-2008) to the INSDC.
RL   Biotechnology, University of Calicut, Calicut University PO, Kerala 673635,
RL   India
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DR   MD5; 9cdd81ece375300eec6042436cf9d8cd.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1111
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA-1"
FT                   /host="Musa paradisiaca cv. Quintal Nendran"
FT                   /isolate="Kerala 1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Kerala, Maikad"
FT                   /collection_date="Sep-2006"
FT                   /PCR_primers="fwd_seq: caggcgcacaccttgagaaacgaaagggaa,
FT                   rev_seq: ggaagaagcctctcatctgcttcagagagc"
FT                   /db_xref="taxon:12585"
FT   gene            57..677
FT                   /gene="Rep"
FT   CDS             57..677
FT                   /codon_start=1
FT                   /gene="Rep"
FT                   /product="replication initiation protein"
FT                   /db_xref="GOA:B5TRK6"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="UniProtKB/TrEMBL:B5TRK6"
FT                   /protein_id="ACH99203.1"
FT                   /translation="MKEDTRIEGPFEFGAFKLSCNDNLFDVIQDMRETHKRPLEYLYDC
FT                   PNTFDRSKDTLYRVQAEMNKTKAMNSWRTSFSAWTSEVENIMAQPCHRRIIWVYGPNGG
FT                   EGKTTYAKHLMKTRNAFYSPGGKSLDICRLYNYEDIVIFDIPRCKEDYLNYGLLEEFKN
FT                   GIIQSGKYEPVLKIVEYVEVIVMANFLPKEGIFSEDRIKLVSC"
XX
SQ   Sequence 1111 BP; 363 A; 193 C; 277 G; 278 T; 0 other;
     caggcgcaca ccttgagaaa cgaaagggaa gccaagaaga agcgcggtca tactgtatga        60
     aggaagatac aagaatcgaa ggtcccttcg agtttggtgc atttaaattg tcatgtaatg       120
     ataatttatt tgatgtcata caggatatgc gtgaaacgca caaaaggcct ttggagtatt       180
     tatatgattg tcctaacacc ttcgatagaa gtaaggatac attatacaga gtacaagcag       240
     agatgaataa aacgaaggcg atgaatagct ggagaacttc tttcagtgca tggacatcag       300
     aggtggagaa tatcatggcg cagccatgtc atcggagaat aatttgggtc tatggcccaa       360
     atggaggaga aggaaagaca acgtatgcaa aacatctaat gaagacgaga aatgcgtttt       420
     attctccagg aggaaaatca ttggatatat gtagactgta taattacgag gatattgtta       480
     tatttgatat tccaagatgc aaagaggatt atttaaatta tgggttatta gaggaattta       540
     agaatggaat aattcaaagc gggaaatatg aacccgtttt gaagatagta gaatatgtcg       600
     aagtcattgt aatggctaac ttccttccga aggaaggaat cttttctgaa gatcgaataa       660
     agttggtttc ttgctgaaca agtaatgact ttacagcgca cgctccgaca aaagcacact       720
     atgacaaaag tacgggtatc tgattgggtt atcttaacga tctagggccg taggcccgtg       780
     agcaatgaac ggcgagatca gatgtcccga gttagtgcgc cacgtaagcg ctggggctta       840
     ttattacccc cagcgctcgg gacgggacat ttgcatctat aaatagacct cccccctctc       900
     cattacaaga tcatcatcga cgacagaatg gcgcgatatg tggtatgctg gatgttcacc       960
     atcaacaatc ccacaacact accagtgatg agggatgaga tcaaatatat ggtatatcaa      1020
     gtggagaggg gacaggaggg tactcgtcat gtgcaaggtt atgtcgagat gaagagacga      1080
     agctctctga agcagatgag aggcttcttc c                                     1111
//