Dbfetch
ID EU931517; SV 1; linear; genomic RNA; STD; VRL; 2160 BP. XX AC EU931517; XX DT 11-AUG-2008 (Rel. 96, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate JYC07 segment RNA4, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2160 RA Cheng W., Xiao D., Wu Z., Xie L.; RT "Molecular Variability of RNA4 of Rice Stripe Virus in China"; RL Unpublished. XX RN [2] RP 1-2160 RA Cheng W., Xiao D., Wu Z., Xie L.; RT ; RL Submitted (29-JUL-2008) to the INSDC. RL Institute of Plant Virology, Fujian Agriculture and Forestry University, RL Jinshan, Fuzhou, Fujian 350002, China XX DR MD5; 0c897340c91bc2a9f94378880b85699f. XX CC GenBank Accession Numbers EU931514-EU931517 represent sequences CC from the 4 segments of Rice stripe virus isolate JYC07. XX FH Key Location/Qualifiers FH FT source 1..2160 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA4" FT /host="Oryza sativa (rice)" FT /isolate="JYC07" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="infected leaves" FT /collection_date="Jul-2007" FT /db_xref="taxon:3052763" FT CDS 55..591 FT /codon_start=1 FT /product="SP protein" FT /db_xref="InterPro:IPR006960" FT /db_xref="UniProtKB/TrEMBL:B5B667" FT /protein_id="ACG58362.1" FT /translation="MQDVQRTVEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER FT VTEDTKKLILKGCVYIAYHHPLETDNLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI FT GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM FT PTYFESIIQPLLHKT" FT CDS complement(1249..2109) FT /codon_start=1 FT /product="NSvc4 protein" FT /db_xref="GOA:B5B668" FT /db_xref="InterPro:IPR004980" FT /db_xref="UniProtKB/TrEMBL:B5B668" FT /protein_id="ACG58363.1" FT /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG FT RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT FT HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL FT ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL FT EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE FT VSVIM" XX SQ Sequence 2160 BP; 701 A; 441 C; 400 G; 618 T; 0 other; acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa 60 gacgtacaaa ggacagtaga agtttctgtt ggtcctattg taggcctaga ttacactcta 120 ttgtatgaca ctctgcccga aactgttagc gataacataa ctctacctga tttgaaagat 180 ccagagagag tcacggaaga taccaagaag ctaatactca aaggctgtgt ttacatagca 240 tatcatcatc ccttggagac tgacaaccta ttcatcaaag ttcacaaaca tataccagag 300 ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctctcata 360 gacattggcc tgtttttcaa catgctgcaa ccctctttgg gcggttggat aaccaagaat 420 tttcttagac accctaatag gatgtctaag gaccaaatta aattgctcct agatcagatc 480 atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag 540 atgccaactt attttgaatc aattatccaa cctcttctac acaaaacata gtttactgca 600 tatcacattt tccacccacg agagcttgca ttctagaagt ggagccagtt tgggttgacc 660 ttctagtatg ataatacaag tatttatagt ctaaacaata tacatgatgt ttgttcactt 720 aagcttgaca gtttgtaaat aatagtgtgt gattgagcgt gtgtgtatat atgtattaat 780 atataactgt acacaggtgt gtagatgtga acacttgaaa tgaataaata aacatattcc 840 tatcaaatca tatacatgct tgtgagtctt ggctcttcta tacacacaca tgaaaaaaca 900 tgagagtatc atacaagacc cattgctaaa atactaataa ctttgctttt acaatgttag 960 aaccaaaaac tgaaatacca aaaacatgag aaaatagaaa atcaaaaaca atgaatggtg 1020 ctaagcacca catccggatg tggtgcgtag caccattttc ataacattag tctataacct 1080 acttgtggca aaaacaccca tatgcatgaa gtgcatagca ctcctttatg gattaaccac 1140 tatgattacg tgaacgcata gcattctctt gaaaaaaagc agagtaaaac agaccacatc 1200 aagtgcgtag cactagatgt tagaatactc tggaactggt catctcacct acatgatgac 1260 agaaacttca gattttgatt tctttgtgat gggtatcttc tttggctgct tcaccacacc 1320 gaactccttc tcagtgtcta gctcggggaa gctcttgctg gtgaaagcac ctccaacagc 1380 tttctgaaca acattagtag taaaattact aaagctggac aaatggttta ttgctttatc 1440 ttctagtggt tcaaattcaa acatcacagt gtcattagtc ttcatggaca ctggcagatc 1500 agtcctttca atcccccaga accaaagagt tctagagatg acacagttct gcactgagct 1560 gtcatcaaca gatacggaca cttgaagatt atgcttatcc tccaaagcca gaaaattcgc 1620 tagagaaccc aagacagcaa aattcttgct aattgggtag cgaacctcta cctcaacttg 1680 atctgaggag ttcacatagg acttgtctat tatgcggagg gtagttattc cactagctct 1740 acccttaatt ccaatccaga ccatagcaaa agttgccact ctaaagaatg gataatgggt 1800 gagaggttga tgaaaccaat atggatcaac aagtatgttg aaagttgctt tcctatgggc 1860 cttcacagaa tagtcctgtt tggctatgaa catatcatac ttgttcacct tgacatctga 1920 gaagctgaag ggttccaatc caagcattgt ggcagcttgg tcaatcgtaa ctctaccctg 1980 gttcagaggc cttttggaga gagctaaaga tttcctattc ttattatcaa ctctcttttg 2040 ggactcctca ctaaggtcat catagagtac cttacttttt gaagtggaca aaagtcgaga 2100 caaagccata attaaagtat atattagctt aatctcaaaa gatatgccct gactttgtgt 2160 //