ID EU931512; SV 1; linear; genomic RNA; STD; VRL; 2479 BP. XX AC EU931512; XX DT 11-AUG-2008 (Rel. 96, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate SJN07 segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2479 RA Cheng w., Yang j., Wu z., Xie l.; RT "Molecular Variability of RNA3 of Rice Stripe Virus in China"; RL Unpublished. XX RN [2] RP 1-2479 RA Cheng W., Yang J., Wu Z., Xie L.; RT ; RL Submitted (29-JUL-2008) to the INSDC. RL Institute of Plant Virology, Fujian Agriculture and Forestry University, RL Jinshan, Fuzhou, Fujian 350002, China XX DR MD5; d53bc1bef90885197653bfd3a4673faa. XX CC GenBank Accession Numbers EU931510-EU931513 represent sequences CC from the 4 segments of Rice stripe virus isolate SJN07. XX FH Key Location/Qualifiers FH FT source 1..2479 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /host="Oryza sativa (rice)" FT /isolate="SJN07" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="infected leaves" FT /collection_date="Jul-2007" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="NS3 protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:B5B658" FT /protein_id="ACG58353.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPKPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1419..2387) FT /codon_start=1 FT /product="CP protein" FT /note="coat protein" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACG58354.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2479 BP; 766 A; 525 C; 426 G; 762 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaaaaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttaccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaaaaaaaga 720 aaaaagaaaa taaaacaaat aatcaaaaaa acacaaaaaa aatcttaaaa atgaaaaaca 780 caaaaaaacc aaaaaactaa aaaaactaaa aaacatcatg acctaaaaaa actgcacacc 840 actggttgtc tagtgggttc tagttggtag agaaagctat gcttttgcct aaagccatga 900 ttggccaatc cttaaaatgt gctaagcaca ttatccgaag atgtctcgga tgttttttta 960 cctaacctaa tttttttgta tttttatata attttttgat ttttttgtat tttatataca 1020 tatttttgtt ttttgatttt tttgtttttt aatatttttt cttctaattt ctacattaat 1080 atatttgatt attcatatac ttaaaatata tagtatgtat tataaaaata gagcaatata 1140 ataaagctag tataactaca ttacaaacat atatctaaat atttagatag acttatcaaa 1200 ctaaagactc tactagagag tgagtaataa taatggcaat acatcacaca caaagcccaa 1260 aaccacacag acaaaataac ttatggaata taattaaaaa ctaaaataca cacatataaa 1320 tatacatatt aacttacacc taaagaaaca acacactgtt tgaagacata catcttccag 1380 ggagatatga gatcccccac aactactgac ctgtcagttt agtcatctgc accttctgcc 1440 tcgtcctcga agaactcctt caccaacccg ctgacttcag atgctgtctt tgaagtgttc 1500 tcagcaagga tcttcatcag cttgctctgt tgagccaagt acagccttgt ctgattccca 1560 taagtgctga tcgtattgac agacatacca gccagcgcat cgaagattgt ggtcttcact 1620 ttcccattgg tgatgaattc atctaagacc ttctttctgc catcttcctt cttcttgtca 1680 gccaggttct ttgacttgca tgtgatgacc aggagaccag ttgtgtactt catcatgtct 1740 atgtcttttg tcagaccacg ctccttcttc ttaccctctg gcatggtctt tttggttatt 1800 tggaaggagt gaatgatgtg cacaacaaac aaaatgtgac ttagggagtg agttgtgcag 1860 taaggagctg tttcactctc cagtttgatg tattgtggaa catagtccca cagtaagttg 1920 tcacatcctg ttagtcccag gtcagaggag tccacagcca tcttaacacc agaaatttgt 1980 ctcacaactt catgtgagac attagggaat agctgagcca gccttccaag tgtgatagca 2040 ttggcatttg tccctaccga ggacactatc ccatacctcg acaccaaggt cgaagcctct 2100 gtgcttccag ccgccacttt cactttctta gtgacatctc ttacaaagcc agtgcctctc 2160 acatatctca tggtgatgca catagtcata tccttggcca gtgtgtcacc acctttgtcc 2220 ttcaatatgc caatcagagt tgcagcatca tagcctgcat actctatctg accagcaaag 2280 gtcacaacat cagctttatg agcagtcagg taagacaacg catctttgga gatgtcattg 2340 attgccttct gcaaatcagc tagagtggct ggcttgttgg tgcccattgt agcaagaggt 2400 actggaggaa tggttgcggc ttagatgaaa tttggaatgt aaaagcaaaa tcgaaaattt 2460 tattacccag actttgtgt 2479 //