Dbfetch
ID EU931511; SV 1; linear; genomic RNA; STD; VRL; 3514 BP. XX AC EU931511; XX DT 11-AUG-2008 (Rel. 96, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate SJN07 segment RNA2, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-3514 RA Cheng W., Yang J., Wu Z., Xie L.; RT "Molecular Variability of RNA2 of Rice Stripe Virus in China"; RL Unpublished. XX RN [2] RP 1-3514 RA Cheng W., Yang J., Wu Z., Xie L.; RT ; RL Submitted (29-JUL-2008) to the INSDC. RL Institute of Plant Virology, Fujian Agriculture and Forestry University, RL Jinshan, Fuzhou, Fujian 350002, China XX DR MD5; fb58932f020c533af4275218664ab0d7. XX CC GenBank Accession Numbers EU931510-EU931513 represent sequences CC from the 4 segments of Rice stripe virus isolate SJN07. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA2" FT /host="Oryza sativa (rice)" FT /isolate="SJN07" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="infected leaves" FT /collection_date="Jul-2007" FT /db_xref="taxon:3052763" FT CDS 81..680 FT /codon_start=1 FT /product="NS2 protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:Q7T3Z3" FT /protein_id="ACG58351.1" FT /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDHYLNSLDAI FT WLMGCCEEFTDPALRAHALAIATESNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL FT ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV FT TNGIPISKNFNEIALPDPSPSEDYVLVGAHECPILM" FT CDS complement(980..3484) FT /codon_start=1 FT /product="NSvc2 protein" FT /db_xref="GOA:B5B657" FT /db_xref="InterPro:IPR009547" FT /db_xref="UniProtKB/TrEMBL:B5B657" FT /protein_id="ACG58352.1" FT /translation="MHFKSYFIYTTIFNMAWGAPIPFPDTHSWMRNREREPSEIVKVPC FT SARAPPCKLTYELNGYFIENGLICYNRASANYFETCYTGSYDYKLPLHPSFSKFGGHVY FT LSCDDAILQNVSLVGIQQTEYTSSPLLITNSNSEKISYSNLKTGFLGIVYAVETRACIQ FT PDQAKKPEEIINHGVAIKPSCTDGVLYYINSACEVNVSDQTFSIPSCESVKLPTYDDTI FT EVCDKGGCQNVTCHPGEICDKYERMDMIMRIKNYQCSHIYRYSLYSIILFLVIVIVFAL FT ITIMNILFFLRPAFWLLKKVLYSMVGLCHRRPVVDEVSVDMSTVRVVDEAEEGLLVVED FT SIAPNTNVSDKVKRKGRKVENGLIFIPYVLMILLLVCSAESCQDLVSSISNIERCTNNS FT CDFISKMKLTLLNTPQDFCFKTSTDVYKIRFNSVRVMCLSVPLYYTNSFRRVISREEWK FT CFEGEGCRTDGTHSIWGESTSLSFDYCVTDFHILSYCPAYHYNWKRIEYEPTSSRACTI FT MKCMDTKFEIVGYIQKNGHVLKELGGITSKYDSPLVSISLSNYNSARMPREYAECDGKA FT YLRTANDLGSFDKELLGNIQCPTKEDAVVLSSKCKTKILSNEDLPVIRYVERDGVDMLE FT HVKSEPLKDVLVSSSGISLGTLDLFPVELNLQFKEAITSIITSKISLNGTSCKITGIER FT KFKKTTVSIESSNKVYLSDILACEGLAVCPMILNNIKKGTCITTTYYSVTVGSMIKCKF FT IYSGDTLMCKYDVSPLEITVISPSLDVSSFEAVKTSTTNWMELLAGIVKDNPKLSLVAS FT IIPIGLILKTIRSFLDDIRQVD" XX SQ Sequence 3514 BP; 1067 A; 747 C; 634 G; 1066 T; 0 other; acacaaagtc ctgggtatat aagccacata tatcatataa atctaacaga aatcgtccac 60 ggagaatctc gtcttcagca atggcattac tcctcttcaa tgatcactac tatggttttc 120 tccataagta taaaagacat actggatcat atgataatct cttcaatttg aggtgctcta 180 aagaagacca ctatttgaac tctcttgatg ctatctggct catgggatgc tgtgaggagt 240 tcacagatcc agctcttaga gcacatgctc tcgccatagc aactgaatct aatataggtt 300 tggttaacaa taatgccgtg atatctgatg agaggctgaa atgctggctc tgtaaaaaac 360 catctcatca acagactgag catctgaaac tgatcctgtt acccaacttg gtcaacgggt 420 ttcagtttgc tacagagtca tatcacatat gcctgaagga tcactctgga gatgacccta 480 cacaatatct tagtgagttc tcctttccca caggattaag agcctactac aagccacatc 540 aaaagatgga gcataaacat atagttgtaa ccaatggaat acccatctca aagaatttca 600 acgaaattgc tctccctgac ccatctccta gtgaagacta tgtcttagtt ggagcacatg 660 agtgccctat tctaatgtga acttggaaga tgatattgac tgtggcctac aggcacatac 720 acacactggc cacaaacact acaatggtgc tatgcatcaa tttataatct tatatcctcg 780 aaatggtgct acgcaccaca tccggatggt gagcctagct cactttgatt attgagtaaa 840 ttaatgaaac caaacaagta tatttgtaac tataatagct ttcttattat tatgtgatca 900 agacacttaa aactacacac ttaagcttaa gggaagatta ttaatagaaa tatgggcata 960 catgagtgaa cctattggct taatcaacct gtctgatgtc atctagaaaa ctcctaatgg 1020 tcttcaaaat gagtcctatt ggtattattg aagctactag agataacttt gggttgtcct 1080 tgactatccc ggctagcaat tccatccaat tagtggtgct ggtcttcaca gcttcaaaag 1140 agctcacatc aaggctcggc gatatcacgg tgatttccaa tggtgaaaca tcatacttgc 1200 acatgagagt atcaccggag tatatgaatt tgcatttgat catggaacca actgtgaccg 1260 aatagtaagt tgttgttatg catgttcctt ttttaatgtt gttcagtatc atagggcaaa 1320 ctgccaatcc ttcgcaggcc aagatatcac tgagatagac tttgtttgaa gattcaatgc 1380 ttacagttgt cttcttaaat ttcctctcta ttccagtgat cttgcatgag gtcccattga 1440 gagatatctt actagttatt atactggtga tcgcttcctt gaattgcaag tttagctcta 1500 ctgggaatag atccaaagtg cccagagata taccagagct agagaccaac acatccttta 1560 agggttcact tttcacatgc tctagcatat ccactccatc cctctctaca tacctaataa 1620 ctggcaaatc ttcatttgaa agtatcttag ttttacactt actgctaaga acaacagcat 1680 cttctttagt tggacactgt atgttgccta gtaactcctt gtcaaaagac cctaaatcat 1740 ttgcggtcct taaataagct ttcccatcgc actctgcata ttctctaggc attctggcac 1800 tattatagtt tgacaatgat atggaaacta aagggctatc atacttacta gtaatgcctc 1860 ctagttcttt taacacatgc ccattttttt gaatataccc aactatttca aacttagtat 1920 ccatgcactt cataatggtg catgctcttg aagatgttgg ttcatattct attctcttcc 1980 aattgtagtg gtatgctggg caataggaaa ggatgtggaa atcagtgaca caataatcaa 2040 agctcagact agtggattcc ccccatatcg agtgtgttcc atcagttctg caaccttccc 2100 cttcaaagca tttccattcc tctctagaga tcacccttct gaaactgttg gtataataca 2160 gaggcactga taagcacata acccgaacac tattaaatcg tatcttgtag acatcagtcg 2220 atgtcttgaa gcagaaatcc tgaggagtgt ttagtagggt caatttcatt ttagagatga 2280 agtcacaact attatttgtg cacctctcta tattggagat gcttgaaaca aggtcttgac 2340 aggattctgc agaacaaact aatagcaaga tcatcaatac atatggtatg aatatcagcc 2400 cattctctac ttttctaccc ttcctcttta ctttatcgga aacattagtg ttaggtgcaa 2460 tggagtcttc tacaactaac aggccctcct ctgcttcatc tactactcta actgttgaca 2520 tatctacaga cacttcatct acaacaggtc ttctatgaca tagtccaacc attgaatata 2580 gtaccttttt tagcagccaa aatgcaggtc ttaggaaaaa taagatattc attatggtga 2640 tgagagcgaa tactatcact ataacaagga acaagattat agagtacaat gaatatctat 2700 agatgtgaga gcattgataa ttctttatcc tcattatcat gtccattctc tcatacttat 2760 cacaaatctc tcctgggtga caagtaacat tttgacaacc acccttatca caaacctcaa 2820 tagtatcatc ataagttgga agtttgaccg attcacaaga agggatagaa aatgtttggt 2880 cactaacatt gacctcacat gcagaattga tataatacag cacaccatct gtgcaagagg 2940 gcttgattgc aacaccatga tttatgattt cttctggttt cttagcttgg tcaggctgaa 3000 tgcatgccct agtctcaaca gcatacacta ttcccaagaa accagttttg agatttgagt 3060 atgaaatctt ttcagaattg gaattagtta tcaatagagg gcttgaagtg tattctgttt 3120 gctgtatgcc aaccagagat acattctgca gaatagcatc atcacaactg agatagacgt 3180 gaccaccgaa cttagagaaa gaaggatgga gtggcagctt gtaatcgtag cttccagtgt 3240 agcatgtctc aaagtaattc gcactagccc tgttgtaaca aatcagacca ttttcaatga 3300 aatatccatt cagctcataa gtcaatttgc agggaggggc tctggcactg caagggacct 3360 tgacaatctc agatggctcc ctctccctgt tcctcatcca ggaatgggtg tcagggaaag 3420 gtattggtgc accccacgcc atattaaaga ttgtggtgta gatgaaatat gatttaaaat 3480 gcatcttcga agaagttata cccagacttt gtgt 3514 //