Dbfetch
ID EU931500; SV 1; linear; genomic RNA; STD; VRL; 2490 BP. XX AC EU931500; XX DT 11-AUG-2008 (Rel. 96, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate YBS07 segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2490 RA Cheng W., Xiao D., Wu Z., Xie L.; RT "Molecular Variability of RNA3 of Rice Stripe Virus in China"; RL Unpublished. XX RN [2] RP 1-2490 RA Cheng W., Xiao D., Wu Z., Xie L.; RT ; RL Submitted (28-JUL-2008) to the INSDC. RL Institute of Plant Virology, Fujian Agriculture and Forestry University, RL Jinshan, Fuzhou, Fujian 350002, China XX DR MD5; b374f95f09087f63ea947e6e853e04f4. XX CC GenBank Accession Numbers EU931498-EU931501 represent sequences CC from the 4 segments of Rice stripe virus isolate YBS07. XX FH Key Location/Qualifiers FH FT source 1..2490 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /host="Oryza sativa (rice)" FT /isolate="YBS07" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="infected leaves" FT /collection_date="Jul-2007" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="NS3 protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:B5B637" FT /protein_id="ACG58332.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCEDVHCSSRALCYIYD FT IHSSMHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPAIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKKHKYVISSDKPPLSARYVKYVDSSALGPSPGSSPAVL" FT CDS complement(1430..2398) FT /codon_start=1 FT /product="CP protein" FT /note="coat protein" FT /db_xref="GOA:B5B638" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:B5B638" FT /protein_id="ACG58333.1" FT /translation="MGTNKPTTLADLQKAINDISKDALNYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTATEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2490 BP; 752 A; 537 C; 428 G; 773 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagcatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctacttt 120 tggagaatga tctgaccagt ttgagcatca actgtgaaga tgtccactgc tcttcaagag 180 ctttatgtta tatatatgac atccattcat ctatgcaccc ctccattgat gagcatcagt 240 ttctgaggct tctccatggc ccagatgatg ctgtcactct aggctctttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaacc tcccagaaga gtacagactt cctgctataa 360 tgatgtcatc ctcttatgtg aagttcttca ctgaagtgaa gccacgaccc ccatcaacaa 420 attgctggac atgcaggatg tctaaggaca atttaccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgctgag ctttacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaaag cataagtatg 600 tcatttcttc agataaacca cctcttagtg cacgttatgt taagtacgta gattctagtg 660 cactaggacc atcaccaggc agctctccag ctgtgctgta gaaataaaga agagaagaga 720 aggaaaatta aaacaaaaaa acaaaaaaac aaaaaaacaa caaaaaaatc ttaaaaaata 780 aaaaactcaa aaaaattaaa aaactggaaa acaccataat ctaaaaacat acacaccact 840 ggctgtctgg tggactctag ttggtagaga aagctatgct tttgcctaaa gccatgattg 900 gccaatcctt aaaatgtgct aagcacatta tccgaggatg tctcggatgt ttttttacct 960 aacctaattt ttttgtattt ttttatgttt tttgattttt ttgtttttta tatacatatt 1020 tttgattttt ttgtcttttt gattttttca tttttattct taatatatat ccttctagtt 1080 actacattta catatttact tagtcatata cttacatata tagtatatat cataaaatag 1140 agcaatacaa taaacctaat atcactatat tacaagctta catcttaata tttagataga 1200 cttatcaaac taaagactct attagagagt gagcaataat aatagcacta catcatacac 1260 aaagcctaac accacacaga taaaataact tatagaatat aatcaaaaac taaaatatac 1320 atgttatata tacacatatt accttacact taaagaaaca acacactgtt tgaagacatg 1380 cgtcttctag ggagatatga gatccccaac aactgctgac ctgctctgtc tagtcatctg 1440 caccttctgc ctcatcctcg aagaattcct tcaccaaccc gctgacttct gttgctgtct 1500 ttgaagtgtt ctcagcaagg atcttcatca gcttgctctg ttgagccaaa tacagcctgg 1560 tctggttccc atatgtactg atcgtgttga cagacatacc agccagtgca tcgaagattg 1620 tggtcttcac ttttccattg gtgatgaatt catctaacac cttctttcta ccatcttcct 1680 tcttcttgtc aatcaagttc tttgacttgc atgtgatgac caggagacca gttgtgtact 1740 tcatcatgtc tatgtccttt gtcagaccac gctccttctt cttaccctct ggcatggtct 1800 ttttagttat ttggaaggag tgaatgatgt gcacaacaaa caagatgtga ctaagggagt 1860 gagttgtgca gtaaggagct gtttcactct ccagtttaat gtattgtgga acatagtccc 1920 acagtaggtt gtcacatcct gtcagcccca gatcagaaga gtcaacagcc atcttaacac 1980 cagaaatttg tcgcacaacc tcatgtgaga catttgggaa tagctgggcc aaccttccaa 2040 gtgtgatggc attggcattt gatcccaccg aagacactat cccatacctt gataccaagg 2100 ttgaagcctc tgtgcttcca gccgccactt tcactttctt tgtgacatct ctcacaaagc 2160 cagtgcctct cacatatctc atggtgatgc acatagtcat atccttggcc agtgtgtcac 2220 cacccttgtc cttcaatatg ccaatcagag ttgcagcatc atagccagca tactcgatct 2280 gaccagcaaa agtcacaaca tcagctttat gagcagtcag gtaattcaac gcatctttgg 2340 agatgtcatt gattgccttc tgcaaatcag ctagagtggt tggcttgttg gtgcccattg 2400 tagcaagagg tactggagga atggttgcgg cttagatgaa atttggaatg taaaagcaaa 2460 atcgaaaatt ttattaccca gactttgtgt 2490 //