Dbfetch

Dbfetch

ID   EU925642; SV 1; linear; genomic RNA; STD; VRL; 743 BP.
XX
AC   EU925642;
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DT   04-SEP-2008 (Rel. 97, Created)
DT   04-SEP-2008 (Rel. 97, Last updated, Version 1)
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DE   Alfalfa mosaic virus isolate 100-08 coat protein gene, complete cds.
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KW   .
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OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
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RN   [1]
RP   1-743
RA   Bulajic A., Jovic J., Krnjajic S., Djekic I., Obradovic A., Krstic B.;
RT   "First report of Alfalfa mosaic virus on lilac (Syringa vulgaris) in
RT   Serbia";
RL   Unpublished.
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RN   [2]
RP   1-743
RA   Bulajic A., Jovic J., Krnjajic S., Djekic I., Obradovic A., Krstic B.;
RT   ;
RL   Submitted (27-JUL-2008) to the INSDC.
RL   Plant Pathology, Faculty of Agriculture, University of Belgrade, Nemanjina
RL   6, Belgrade 11080, Serbia
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DR   MD5; cf6044dc9d068696dbf6f37d65ce0f62.
DR   RFAM; RF00252; Alfamo_CPB.
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FH   Key             Location/Qualifiers
FH
FT   source          1..743
FT                   /organism="Alfalfa mosaic virus"
FT                   /host="Syringa vulgaris (lilac)"
FT                   /isolate="100-08"
FT                   /mol_type="genomic RNA"
FT                   /country="Serbia"
FT                   /collection_date="May-2008"
FT                   /note="PCR_primers=fwd_name: CPAMV2, rev_name: CPAMV1"
FT                   /db_xref="taxon:12321"
FT   5'UTR           <1..6
FT   CDS             7..663
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B5LZ81"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:B5LZ81"
FT                   /protein_id="ACH67610.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVAKPMN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLKDFAGPRILEEDLIYRMVFSITPSH
FT                   AGSFCLTDDVTTEDGRAVAHGNPMQEFPQGVFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKNPSYRFNEVWVERKAFPRAGPLRSLITVGLLDEADDL"
FT   3'UTR           664..>743
XX
SQ   Sequence 743 BP; 177 A; 184 C; 190 G; 192 T; 0 other;
     tccatcatga gttcttcaca aaagaaagct ggtgggaaag ctggtaaacc tactaaacgt        60
     tctcagaact atgctgctct acgcaaagct caactgccga agcctccggc gttgaaagtc       120
     ccggttgcaa aaccgatgaa tactatactg ccacagacgg gctgcgtgtg gcaaagcctc       180
     gggacccctc tgagtctgag ctcttttaat gggctcggcg tgagattcct ttacagtttt       240
     ctgaaggatt tcgcgggacc tcggatcctc gaagaggatc tgatctacag gatggtgttt       300
     tctataacgc cgtcccatgc cggctccttt tgtctcactg atgacgtgac gactgaggat       360
     ggtagggccg ttgcgcatgg taaccccatg caagaatttc ctcaaggcgt gtttcacgct       420
     aatgagaagt tcgggtttga gctggtcttc acagctccta cccatgcggg aatgcaaaat       480
     caaaatttca agcattccta tgccgtagcc ctctgtttgg acttcgatgc gcagcctgag       540
     ggatctaaaa atccctcata ccgattcaac gaagtttggg tcgagagaaa ggcgttcccg       600
     cgagcagggc ccctccgcag tttgattact gtggggctgc tcgacgaagc tgacgatctt       660
     tgatcgtcat taatgtaccc cattaatttg ggatgctaaa gtcatttaat gctgacctcc       720
     actgggtgga ttaaggtcaa gga                                               743
//