ID EU919669; SV 1; linear; genomic RNA; STD; VRL; 2821 BP. XX AC EU919669; XX DT 16-DEC-2008 (Rel. 98, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE Lilac ring mottle virus polymerase and 2b protein genes, complete cds. XX KW . XX OS Lilac ring mottle virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2821 RX DOI; 10.1007/s00705-008-0233-4. RX PUBMED; 18972183. RA Scott S.W., Zimmerman M.T.; RT "Partial nucleotide sequences of the RNA 1 and RNA 2 of lilac ring mottle RT virus confirm that this virus should be considered a member of subgroup 2 RT of the genus Ilarvirus"; RL Arch. Virol. 153(11):2169-2172(2008). XX RN [2] RP 1-2821 RA Scott S.W., Zimmerman M.T.; RT ; RL Submitted (23-JUL-2008) to the INSDC. RL Entomology, Soils & Plant Sciences, Clemson University, 120 Long Hall, RL Clemson, SC 29634-0315, USA XX DR MD5; 213154e7706698330a8b800df667a942. XX FH Key Location/Qualifiers FH FT source 1..2821 FT /organism="Lilac ring mottle virus" FT /segment="RNA2" FT /mol_type="genomic RNA" FT /country="Netherlands" FT /identified_by="D.Z. Maat" FT /db_xref="taxon:37125" FT CDS 24..2399 FT /codon_start=1 FT /product="polymerase" FT /db_xref="GOA:B7T2J4" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B7T2J4" FT /protein_id="ACJ68815.1" FT /translation="MSLLIPDQEVRPEPIVCEPEPEPVIEIDGRVFLCKEVDQESLDFN FT LEVYVDYLSVKVAACNSWASCSDDTCSTTESFPGDIPNLEISNDSFIDDKKFLEISEEI FT CDPSFVEIDVPLQKIVSEFTVDDECVEHISDRFDTLIPEYEQVSRDNGVFSCWSLSFDN FT EEPYIPKFVPKDVVAHCDPSVIQDAVNDIFPYHHLVDDKYFQAWVEASDISLEVSKCWL FT DLSNFKDPLKGSQCYAEPLFQTGATSRRINTQRETLLAAKKRNMNIPELAQIFDMERER FT EVCFQRFLLNVVDKTRLGKLEPMMTTEVKFFNDYLVGKNPPLSEYQGPLNLCSLDKYMH FT MVKTTIKPVEDNSLIHERPLCATITYHKKGIVMQSSPIFLAAMSRLFFVLKSKILIPSG FT KFHQLFNLDPLSFESARWFKEVDFSKFDKSQGELHHLVQKDIFMALGLPPDFVDVWFSS FT HERSHIVDRDTGVGFSVNYQRRTGDAVTYLGNTIVTLICLARVYDLNSSDITFVVASGD FT DSLIGSLHELPRDSESLFVSLFNFEAKFPHNQPFICSKFLVAVDVEGGRREVISVPNPA FT KLLIRMGKKDCQYQDLGELFISWLDVVKYFRDSEVCRKVADLCAYRQKRGPSMYLEAAL FT LALPVCFSNRKKFLNICYSLTNDDCLKYSDLRIKKKKSDDYQTHLKQNDDYRSRKQDRR FT YRAMCAPWFGKIFQEGTVCDEKRTHTHSFHSQSDHYRSICGRSPTVVSSTDGNRECRGS FT REAGSYGRENSRLKYRPRDRGVHQSSRFDPNSVPPNSR" FT CDS 2071..2631 FT /codon_start=1 FT /product="2b protein" FT /db_xref="GOA:B7T2J5" FT /db_xref="UniProtKB/TrEMBL:B7T2J5" FT /protein_id="ACJ68816.1" FT /translation="MMITDLGNRIDATGRCVHPGSEKFFRKGLYVMKRERILIHFILSL FT IITGQFVAEARLLYPQQMAIVSVGAPEKPARMVVKIPDLNIDLEIAEFTNPAVLIQTVY FT RRILGELKDSWYVLSWSTVKYNSIRDRLKILKNAQVHFSIPDSDWAFTLSLSDVVSGLS FT LPKIPVPKVYLSMSADSADTHDL" XX SQ Sequence 2821 BP; 737 A; 551 C; 631 G; 902 T; 0 other; acgcggggga tgtcctttta aggatgtcgc ttctgattcc cgatcaagaa gtgagacctg 60 aaccgattgt ttgcgaaccc gaacctgaac cagtgattga aattgatggg agagttttcc 120 tctgcaaaga ggttgaccaa gaatcattag attttaatct tgaagtttat gttgattatc 180 tgtctgtgaa ggttgcggct tgcaattcgt gggcttcttg ttccgatgac acgtgttcga 240 cgaccgaaag ttttcctgga gatattccta atttggaaat ttccaatgat tccttcattg 300 atgacaagaa atttcttgag atctctgaag agatttgtga tccttctttc gtggagattg 360 atgttcctct acagaagatc gtttcagagt ttactgtcga tgatgaatgt gttgaacata 420 tttcagaccg tttcgacacg ctgattcctg aatacgagca agtatccaga gataatggag 480 tgttttcttg ttggtcttta tcatttgaca atgaagaacc ctacatccca aagtttgttc 540 ctaaagatgt ggttgctcac tgtgatccta gtgttattca ggacgcagtg aatgatattt 600 ttccctacca tcatttggtg gatgacaaat atttccaggc ttgggtcgaa gccagtgaca 660 tttcacttga agtttcaaaa tgctggttag acctttcaaa tttcaaggat ccgttgaaag 720 gcagccaatg ttatgccgaa cccttgtttc aaactggtgc cacttcgaga aggataaaca 780 cgcagcgtga aaccttactc gctgcgaaga aacgtaacat gaatatacct gaattggcac 840 agatcttcga tatggaacgt gagagggaag tttgtttcca gaggttcctc ttgaatgttg 900 ttgacaaaac ccgattggga aagttggaac cgatgatgac cactgaagta aagtttttta 960 acgattactt agtgggcaag aatccccctc tctctgagta tcagggccct ttgaatctgt 1020 gttctctaga caagtatatg catatggtca aaacgaccat aaaacctgtt gaggacaatt 1080 cacttattca tgaacgtcca ctttgtgcca ctattaccta tcacaagaag ggaatagtga 1140 tgcagtcgtc tccgatcttt ttggcggcta tgtcaaggtt gtttttcgtc ttgaaatcga 1200 agattctcat accgtctggt aaattccacc agttgttcaa tttggatcct ctaagtttcg 1260 aaagtgctcg ttggttcaaa gaagtcgact tttccaagtt cgacaaatca caaggtgaac 1320 tccatcacct cgttcagaag gacattttca tggctttggg gttacctcca gatttcgttg 1380 atgtttggtt ttcaagtcac gagagatccc acattgtcga tagagacaca ggtgtgggtt 1440 tctccgtgaa ttatcaaaga cgtactggag atgcagtcac ttatttagga aacacaattg 1500 tcactctgat ttgtttggca cgtgtgtatg acctgaattc tagtgacatc acatttgttg 1560 ttgcttctgg tgatgattcg ctcataggtt ctttacatga gttaccgcga gattcagaga 1620 gtctttttgt ttcattattt aatttcgaag caaagtttcc tcacaatcaa cccttcattt 1680 gttccaagtt tcttgtggct gttgatgttg aaggtggtcg tcgagaggtg atttctgttc 1740 ccaaccctgc caagcttttg attcgtatgg gaaaaaaaga ttgtcaatat caagacttgg 1800 gtgaattgtt tatttcttgg ttggatgttg tgaaatattt ccgagattcc gaagtgtgtc 1860 gcaaagttgc agatctctgc gcgtacagac agaaacgtgg tccatcgatg tatctcgaag 1920 ctgctttatt agcgttgccg gtttgttttt ctaatagaaa gaaatttcta aacatttgtt 1980 attctttaac aaatgacgat tgtctgaagt attctgatct cagaataaag aaaaagaaat 2040 ccgacgatta ccaaacacat ttgaagcaaa atgatgatta ccgatctagg aaacaggatc 2100 gacgctacag ggcgatgtgt gcaccctggt tcggaaaaat ttttcaggaa gggactgtat 2160 gtgatgaaaa gagaacgcat actcattcat ttcattctca gtctgatcat taccggtcaa 2220 tttgtggccg aagcccgact gttgtatcct caacagatgg caatcgtgag tgtaggggct 2280 cccgagaagc cggctcgtat ggtcgtgaaa attccagact taaatatcga cctagagatc 2340 gcggagttca ccaatccagc cgttttgatc caaacagtgt accgccgaat tctcggtgaa 2400 ttgaaggatt cttggtatgt tcttagttgg tcaactgtca agtataattc gatacgcgac 2460 cgcttgaaga ttttgaagaa tgctcaggtg catttttcta taccggatag tgattgggct 2520 tttaccttat ctctatctga cgtggtgtct ggactctcct taccgaagat accagttccg 2580 aaagtttatc tttcgatgtc tgctgattca gcagatacac atgatttgta atcatattgt 2640 gtttattcca ttcaaagacc ctcttgggcg cactcagtgc ttaactttgg atgagtttgt 2700 attccgactg tttgtttctc ccagtcgatg cctgtaggcg tttacagacg agtacggttt 2760 ttaccgtatg ttcctattct ctctctcagg agaggagaat agatgcctcc aaaggagtcg 2820 c 2821 //