ID EU919666; SV 1; linear; genomic RNA; STD; VRL; 3431 BP. XX AC EU919666; XX DT 01-JAN-2009 (Rel. 98, Created) DT 09-APR-2009 (Rel. 100, Last updated, Version 2) XX DE Asparagus virus 2 segment RNA1, complete sequence. XX KW . XX OS Asparagus virus 2 OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-3431 RX DOI; 10.1007/s00705-009-0355-3. RX PUBMED; 19291361. RA Scott S.W., Zimmerman M.T.; RT "The nucleotide sequences of the RNA 1 and RNA 2 of asparagus virus 2 show RT a close relationship to citrus variegation virus"; RL Arch. Virol. 154(4):719-722(2009). XX RN [2] RP 1-3431 RA Scott S.W., Zimmerman M.T.; RT ; RL Submitted (23-JUL-2008) to the INSDC. RL Entomology, Soils & Plant Sciences, Clemson University, 120 Long Hall, RL Clemson, SC 29634-0315, USA XX DR MD5; 80a4135119771f8f86239ca4830fb1be. XX FH Key Location/Qualifiers FH FT source 1..3431 FT /organism="Asparagus virus 2" FT /segment="RNA1" FT /mol_type="genomic RNA" FT /country="USA" FT /identified_by="G.I. Mink" FT /db_xref="taxon:39681" FT CDS 73..3303 FT /codon_start=1 FT /product="replicase" FT /db_xref="GOA:B8RCA3" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B8RCA3" FT /protein_id="ACJ68508.1" FT /translation="MDTIVQHESTVLRVDDLINDTIRRNAARPETAVGRLVSDAAVQVV FT ARQCDLTPAKPLNVSFQLSPEDQNALRRDFPGRELQFRNSSYSSHSFAAAHRVCETDYI FT YGRFQTENTTIIDIGGNFCTHSKMGRDNVHSCCPILDVRDGARYTDRFMSVAGSLEKQP FT DRELRLNYCSNRFEECDVSAPWAMAIHSISDIPITTVVKHCFRRGVKKLIASIMMDPMM FT LIATTGFIPRLNVKWEIETESDGKSRRISFHFVDAPGLSYSHNYDVLMQYMTCNQVIIS FT GKAAYRVERVADLSGVFIVEITLAATAGIERLDLVPMRDVSCAWMTSLRRKTLVRVAVP FT QYRHAWEIKYIIADTDFVRRVAEVSFRQYKPDTKLEDLVKSIATMISSSSNHCIINGVT FT MQTGTPVAIEDYVPMAVTFVAFAISRHKSIAKGIKMVEQRGTNIMDPNDHYDYEMDGSD FT VKSFSNHIIPMKNTIKSLFFPSKAKIGDNSMLIYSQSLMSTVVDEIKTLFGWDVWDTDD FT AVIQSLPSFYKMEDVFQVTSDHYCLSHTLSVDYWLEGLYDSYDALRKAHKKKLEEEEAY FT KTKVENALLKIAEVLEKPDVDDGLKQLKTIPLINSLLEKKTEEIVTKPQCRDSEKPHIN FT PYADAIKEAIAYYHELEMVNTRNLRGVGDYLGWRTKTNYASVWAGEESRMVLEPMARKF FT HSKDRDVPIPEYERGMTVDGFISLSWKDGEITRETWKSLAKYNVVLFDQSCVFDAGSRL FT LPGLNKALVMDASFKVVIEDGVAGCGKTTSLLKQAKPDSDLLLAANRETAKDAKTSGVV FT PDALLYRVRTVDSYLMLKNWFTADRLLVDECFLVHAGLIYAAATLARVKEVIAFGDTKQ FT IPFVSRIPTVTLRHASVIGVLKPRTITYRCPRDVTAILSEKFYHTKVKTFNPVKISLDL FT ININSAVEIPVVKDALYITHTKADKFALKKLPGMGNVDVLTTHEAQGKTRDNVILARLS FT RTTHLLYSGKMPDAGSSHNLVGLSRHKKSLRYFSVFADDPDDQIASGIRWSKTLDEQEL FT SAYRAANSVSFMKPSEGSSGMCSAPSLS" XX SQ Sequence 3431 BP; 944 A; 663 C; 805 G; 1019 T; 0 other; gtattgtgca gtattatttt acgcacgacc cggattaatc agttttctga gtatataccc 60 gttagaaact caatggatac gatcgtgcag catgaatcta ctgtgttacg agtcgatgac 120 ctgattaatg atacgatcag gagaaatgct gctcgcccag aaacagctgt tggtaggctt 180 gtttctgatg ccgctgtgca ggtcgttgct aggcaatgtg accttacgcc agcgaagcct 240 cttaatgtgt cctttcaatt gtcaccggaa gaccagaatg cattaaggag agattttcct 300 ggaagagagc tccaatttag gaattcgtca tattcttctc actcttttgc ggctgcacac 360 cgcgtttgtg agacggatta catatatgga cgcttccaga ctgaaaatac cacgatcatc 420 gatataggag gaaatttttg cacccacagt aaaatgggta gagataatgt ccattcgtgt 480 tgccctatat tggatgttcg tgatggtgct aggtatacgg atagatttat gtcagttgct 540 ggatcattgg aaaaacaacc agatcgtgaa ttacggttga attattgttc caatagattc 600 gaagaatgtg atgtttccgc tccttgggcg atggcaatac attccatttc cgatattcct 660 atcactaccg tggttaaaca ttgttttaga agaggagtga aaaaactcat tgcttcgata 720 atgatggatc ccatgatgct catcgccact acgggtttta tccctcgact taacgtcaaa 780 tgggaaattg aaaccgaaag cgatggaaag tcccgacgta tttcttttca tttcgtcgat 840 gctcccggat tgtcatattc tcataactat gatgtgctaa tgcagtacat gacttgtaat 900 caagtcataa tatcagggaa agccgcgtac agagttgaac gcgttgcaga tctatcgggt 960 gttttcattg tcgagatcac ccttgcagcc actgctggca ttgagcgttt ggatctagtt 1020 cccatgcgcg atgtttcatg cgcttggatg acgtctttaa gacggaagac cttggtgagg 1080 gtggccgttc cccagtatag gcatgcgtgg gagataaagt atatcattgc tgacacagat 1140 tttgtcagaa gagtggctga agtttcattc cgtcaatata agcctgacac caaattggaa 1200 gatttggtga aatccattgc gacgatgatt tcctcttctt cgaaccattg tatcattaat 1260 ggcgttacca tgcagactgg cacaccagta gccattgagg attatgttcc aatggcagtt 1320 acttttgttg cctttgctat atcacgtcat aagtccattg ctaaaggaat taaaatggtg 1380 gagcagagag gtactaacat aatggaccca aatgatcatt atgattatga aatggatggt 1440 tccgatgtta agagtttttc caaccacatt attcccatga agaataccat caagtcctta 1500 tttttcccct cgaaagcgaa aattggcgat aattcaatgt tgatttacag tcaaagtctc 1560 atgtctactg ttgttgatga gattaaaacg ctttttggat gggatgtttg ggataccgat 1620 gatgcagtca tacaatcatt gccctccttt tataaaatgg aggatgtgtt ccaagttacc 1680 tccgaccatt attgtttgtc acacacattg tctgttgatt attggttgga gggtttgtat 1740 gatagctatg atgcccttcg taaggcgcat aagaaaaagc ttgaagagga ggaggcttat 1800 aaaacaaagg ttgaaaatgc cctcctaaaa attgctgagg tcttggagaa acccgatgtt 1860 gatgacgggt tgaaacagtt gaaaacaata cctctgataa attcattatt ggagaagaaa 1920 acggaagaaa ttgttacaaa gcctcaatgc agggattctg agaaacccca cattaatccc 1980 tatgctgatg caatcaagga agctattgct tattaccatg agcttgagat ggtaaatacg 2040 cgtaatctga gaggtgttgg tgattacctc ggatggcgca cgaaaacgaa ctatgccagt 2100 gtgtgggctg gtgaagagtc cagaatggtg ctagaaccaa tggccagaaa gttccattct 2160 aaggaccgtg atgttcccat acccgagtat gagcgaggta tgacggttga tggtttcatt 2220 tcccttagtt ggaaggatgg tgaaatcaca agggagacgt ggaaatccct tgccaaatac 2280 aacgttgttt tgttcgatca atcgtgtgta tttgatgccg gttcgcgact tttaccaggg 2340 ttaaataaag ccctcgtaat ggatgcttct tttaaagtcg ttatcgagga tggtgtggct 2400 ggatgtggaa aaacaacatc tctactcaag caagcgaaac ctgattcaga tttgttgtta 2460 gcggccaacc gtgagactgc aaaagatgca aaaaccagcg gagttgttcc ggatgctcta 2520 ttgtaccgag ttagaactgt cgattcttac ttgatgctca agaactggtt tactgccgac 2580 cgtttattgg ttgatgagtg tttcctagtt catgctggtt tgatctatgc agctgccacc 2640 ttggcacgag tgaaggaggt tattgctttt ggtgatacta agcaaatacc attcgtgtct 2700 cgtattccaa cggtcacttt gcgtcacgct tcagtgatcg gtgttttgaa gcccaggaca 2760 ataacctata gatgtcctag ggatgttacc gccattttga gcgagaagtt ttatcatacc 2820 aaggtgaaaa cttttaaccc agtgaaaatt tcattggatt tgattaatat caattcagca 2880 gtggaaattc ctgtggtgaa ggatgcttta tatataactc acactaaagc tgataagttt 2940 gccttgaaga aattgccagg aatggggaac gttgatgtgc tcaccactca tgaagcgcaa 3000 gggaaaacgc gtgacaatgt tatccttgct agactaagta ggactactca tttactatat 3060 tccgggaaga tgcccgatgc tggtagttca cataacttag taggtttgtc ccggcataag 3120 aagagtttga gatacttttc tgtttttgcc gatgatccag atgatcagat tgcttctgga 3180 attcgttggt ctaaaacttt agacgaacaa gagctgtccg catatagggc agctaatagt 3240 gtttctttca tgaaacctag tgaagggtcc tccgggatgt gctcagcacc tagcctaagc 3300 taagtccata tgcccatctt tgctgctccg gatggatgtt tatacccgct gtggatgcct 3360 attactgaaa tgtaatagat gcctaatact ctctctcatg gagagagttt agatgcctcc 3420 aaaggagatg c 3431 //