ID   EU916832; SV 1; linear; genomic RNA; STD; VRL; 1329 BP.
XX
AC   EU916832;
XX
DT   03-MAR-2009 (Rel. 100, Created)
DT   03-MAR-2009 (Rel. 100, Last updated, Version 1)
XX
DE   Cassava brown streak virus isolate BSA4 coat protein gene, partial cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1329
RX   DOI; 10.1007/s00705-008-0301-9.
RX   PUBMED; 19184340.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Mukasa S.B., Tairo F.,
RA   Kyamanywa S., Kullaya A., Valkonen J.P.;
RT   "Genetically distinct strains of Cassava brown streak virus in the Lake
RT   Victoria basin and the Indian Ocean coastal area of East Africa";
RL   Arch. Virol. 154(2):353-359(2009).
XX
RN   [2]
RP   1-1329
RA   Mbanzibwa D.R., Tian Y., Tugume A.K., Mukasa S.B., Tairo F., Kyamanywa S.,
RA   Kullaya A., Valkonen J.P.T.;
RT   ;
RL   Submitted (22-JUL-2008) to the INSDC.
RL   Applied Biology, University of Helsinki, Latokartanonkaari 7, Helsinki
RL   00790, Finland
XX
DR   MD5; cdb7e4f9041a51d92985b50bd1de598b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1329
FT                   /organism="Cassava brown streak virus"
FT                   /host="cassava"
FT                   /isolate="BSA4"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1104
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:C0J7J3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C0J7J3"
FT                   /protein_id="ACK58211.1"
FT                   /translation="ALNQEEIEAEITALKKIWKDNGPTKTRSPFEARRLRAPQVERVNE
FT                   LLQKLKDEGLQTKKRPCGEPDDGEVVDDDSDDGNNQRSGKEVVDESQNNQQVDPRKPKF
FT                   KIRGDGSTIRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPDVIQNFLA
FT                   YIPPSHAIDNQLASGIEVENWAIEVAKAYGVNIQEFYRTILPAWIVNCIVNGTSDERKN
FT                   EKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKVMRNFSSQAILMYQNSVAAGKAF
FT                   VIKAARNAGYTSIENKWLGIDFLAEAQLSQNQLDIKHQILAANVGRTKTRLFALAAPGD
FT                   DNNVDRERHTTHDVSANRHSYSGAAIE"
FT   3'UTR           1105..1329
XX
SQ   Sequence 1329 BP; 447 A; 200 C; 314 G; 368 T; 0 other;
     gccttgaatc aggaggagat tgaagcggag atcacagctc taaagaagat atggaaggat        60
     aatggaccaa caaaaacacg tagtccattt gaggctagga gattaagagc cccacaagtt       120
     gagcgtgtaa atgagttact tcagaaactg aaggatgaag gattgcaaac aaagaagagg       180
     ccatgtggag aaccagatga cggagaagtg gtcgatgatg atagtgatga tggtaataat       240
     cagagatctg gaaaagaagt tgttgatgaa agccagaata atcagcaagt tgatccaaga       300
     aagccgaaat tcaaaattag aggagatgga agcaccatta gacgggatga cattgataaa       360
     attccaacta atgctcttga gatcaagaag actttcaagc ctccaaaggt gtcacagtca       420
     gcttacattt ggattccacg ctctcaaagg gataatctaa ctcctgatgt aattcagaat       480
     ttcctggcat atatacctcc atctcatgct atagataatc aacttgcttc aggaattgaa       540
     gttgagaatt gggcaattga ggttgctaaa gcatatggag ttaatataca ggaattttat       600
     cgcacaattt tgccagcttg gattgtgaac tgtatagtga acggtactag cgatgaaagg       660
     aagaatgaga agtcatggcg agcagttgaa ttgaattctc agggggaaga tgttgatgat       720
     tttgagtatc caatggagcc aatgtacaaa tttgcattgc caactatgag gaaggttatg       780
     aggaacttct ctagccaagc tatcctcatg tatcagaata gtgttgctgc aggtaaggcg       840
     tttgtgataa aagctgctag aaatgctgga tacacaagca ttgaaaataa atggctaggt       900
     atagattttc ttgccgaggc tcaattgtct cagaatcaac ttgatatcaa gcatcagatt       960
     ctggcagcga atgttggtag aacaaagaca agactgtttg cattagcagc tcctggagat      1020
     gataataatg tagatagaga aaggcacacg acacacgatg tcagtgcaaa caggcacagc      1080
     tacagtggtg ccgcaattga ataaataaaa tattagtgtt tctaattgag tttgatgaga      1140
     ttatagcttg gttggaaagc taagttgtat tcaaattcga attcaagtac ttaaatattg      1200
     tattttgttt tcaagtttgg tggagttttg gattgccaat tatattttgg ttagataagc      1260
     caaaatgtat tttggagatc tttctccata tccttttgtt tggtgtagaa atatacctta      1320
     taaaagtcc                                                              1329
//