ID   EU916831; SV 1; linear; genomic RNA; STD; VRL; 1330 BP.
XX
AC   EU916831;
XX
DT   03-MAR-2009 (Rel. 100, Created)
DT   03-MAR-2009 (Rel. 100, Last updated, Version 1)
XX
DE   Cassava brown streak virus isolate BSA2 coat protein gene, partial cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1330
RX   DOI; 10.1007/s00705-008-0301-9.
RX   PUBMED; 19184340.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Mukasa S.B., Tairo F.,
RA   Kyamanywa S., Kullaya A., Valkonen J.P.;
RT   "Genetically distinct strains of Cassava brown streak virus in the Lake
RT   Victoria basin and the Indian Ocean coastal area of East Africa";
RL   Arch. Virol. 154(2):353-359(2009).
XX
RN   [2]
RP   1-1330
RA   Mbanzibwa D.R., Tian Y., Tugume A.K., Mukasa S.B., Tairo F., Kyamanywa S.,
RA   Kullaya A., Valkonen J.P.T.;
RT   ;
RL   Submitted (22-JUL-2008) to the INSDC.
RL   Applied Biology, University of Helsinki, Latokartanonkaari 7, Helsinki
RL   00790, Finland
XX
DR   MD5; 7a3ba687e6966073f09aa17cd5563228.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1330
FT                   /organism="Cassava brown streak virus"
FT                   /host="cassava"
FT                   /isolate="BSA2"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1104
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:C0J7J2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C0J7J2"
FT                   /protein_id="ACK58210.1"
FT                   /translation="ALNQEEIEAEITALKKIWKDNGPTRTRSPFEARRLRVPQVERVNE
FT                   LLQKLKDEGLQTKKRPCGEPDDGEVVDDDSDDGNKQRSGKEVVDESQNNQQVDPRKPKF
FT                   KIRGDGNAIRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPDVIQNFLA
FT                   YIPPSHAIDNQLASGIEVENWAIEVAKAYGVNIQEFYRTILPAWIVNCIVNGTSDERKN
FT                   EKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKVMRNFSSQAILMYQNSVAAGKAF
FT                   VIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILAANVGRTKTRLFALAAPGD
FT                   DNNVDRERHTTHDVSANRHSYSGAAIE"
FT   3'UTR           1105..1130
XX
SQ   Sequence 1330 BP; 445 A; 203 C; 317 G; 365 T; 0 other;
     gccttaaatc aggaggagat tgaagcggag atcactgctc taaagaagat atggaaggat        60
     aatggaccaa caagaacacg tagtccattt gaggctagga gattgagagt cccacaagtt       120
     gagcgtgtaa atgagttact tcagaaactg aaggatgaag gactgcaaac aaagaagagg       180
     ccatgtggag aaccagatga cggagaagtg gtcgatgatg atagtgatga tggtaataag       240
     cagagatctg gaaaggaagt tgttgatgaa agccagaata atcagcaagt tgatccaaga       300
     aagccgaaat tcaaaattag aggagatgga aacgccatta gacgggatga cattgataaa       360
     attccaacta atgctcttga gatcaagaag actttcaagc ctccaaaggt gtcacagtcg       420
     gcttacattt ggattccacg ctctcaaagg gataatctaa cccctgatgt aattcagaat       480
     ttcctggcat atatacctcc atctcatgct atagataatc aacttgcttc aggaattgaa       540
     gttgagaact gggcaattga ggttgctaaa gcatatggag ttaatataca ggaattttat       600
     cgcacaattt taccagcttg gatagtgaac tgtatagtga atggtactag cgatgaaagg       660
     aaaaatgaga agtcgtggcg agcagtcgag ttgaattctc agggggaaga tgttgatgat       720
     tttgagtatc caatggaacc aatgtacaaa tttgcattgc caactatgag gaaggttatg       780
     agaaacttct ctagccaagc tatcctcatg tatcagaata gtgttgctgc aggtaaggcg       840
     tttgtgataa aagctgctag aaatgctgga tacacaagta ttgaaaataa atggctaggt       900
     atagattttc ttgccgaagc ccaattgtcc cagagccaac ttgatatcaa gcaccagatt       960
     ctggcagcga atgttggtag aacaaagaca agactgtttg cattagcagc tcctggggac      1020
     gataacaatg tagatagaga aaggcacacg acacacgatg tcagtgcgaa caggcacagt      1080
     tatagtggtg ccgcaattga ataaataaaa tattagtgtt tctatttgag tttgaatgaa      1140
     attatagctt ggttggaaag ctaagttgta tttcaaattt gaattcaagt acttaaatat      1200
     tgtattttgt tttaagtttg gtggagtttt ggattgccaa ttatattttg gttagataag      1260
     ccaaaatgta ttttggagat ctttctccat atccttttgt ttggtgtaga aatatacctt      1320
     ataaaagtcc                                                             1330
//