ID   EU916828; SV 1; linear; genomic RNA; STD; VRL; 1331 BP.
XX
AC   EU916828;
XX
DT   03-MAR-2009 (Rel. 100, Created)
DT   03-MAR-2009 (Rel. 100, Last updated, Version 1)
XX
DE   Cassava brown streak virus isolate HMA9 coat protein gene, partial cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1331
RX   DOI; 10.1007/s00705-008-0301-9.
RX   PUBMED; 19184340.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Mukasa S.B., Tairo F.,
RA   Kyamanywa S., Kullaya A., Valkonen J.P.;
RT   "Genetically distinct strains of Cassava brown streak virus in the Lake
RT   Victoria basin and the Indian Ocean coastal area of East Africa";
RL   Arch. Virol. 154(2):353-359(2009).
XX
RN   [2]
RP   1-1331
RA   Mbanzibwa D.R., Tian Y., Tugume A.K., Mukasa S.B., Tairo F., Kyamanywa S.,
RA   Kullaya A., Valkonen J.P.T.;
RT   ;
RL   Submitted (22-JUL-2008) to the INSDC.
RL   Applied Biology, University of Helsinki, Latokartanonkaari 7, Helsinki
RL   00790, Finland
XX
DR   MD5; ba7b1d0f8fba0c4f95489b0047855ed7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1331
FT                   /organism="Cassava brown streak virus"
FT                   /host="cassava"
FT                   /lab_host="Nicotiana rustica"
FT                   /isolate="HMA9"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1104
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:C0J7I9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C0J7I9"
FT                   /protein_id="ACK58207.1"
FT                   /translation="ALNQEEIEAEITALKKLWRDNGPTRTRSPFEARRLRAPQVERVNE
FT                   LLQKLKDEGLQTKKRPCGEPDDGEVVDDDSDDGNNQRSGKEVIDESQNNQQVDPRKPKF
FT                   KIRGDGSAVRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPDVIQNFLA
FT                   YVPPSHAIDNQLASGIEVENWAIEVAKAYGVNIQEFYRTILPAWIVNCIVNGTSDERKN
FT                   EKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKVMRNFSSQAILMYQNSVAAGKAF
FT                   VIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILAANVGRTKTRLFALAAPGD
FT                   DNNVDRERHTTHDVSANRHSYSGAAIE"
FT   3'UTR           1105..1331
XX
SQ   Sequence 1331 BP; 443 A; 198 C; 321 G; 369 T; 0 other;
     gctttaaatc aggaggaaat agaagcagag atcactgctt taaagaagct gtggagagat        60
     aatgggccaa caaggacgcg tagtccattt gaggctagga gattgagagc cccacaagtt       120
     gagcgtgtga atgagttact tcagaaactg aaagatgaag gattgcaaac aaagaagagg       180
     ccatgtgggg aaccagatga tggggaagtg gtggatgatg atagtgatga tggtaataat       240
     cagagatctg gaaaggaagt tattgatgaa agccagaata atcagcaagt tgatccaaga       300
     aagccaaaat tcaaaattag aggagatgga agtgctgtta gacgggatga cattgataaa       360
     attccaacta atgctcttga gatcaagaag acgtttaagc ctccaaaggt ttcacaatca       420
     gcttacattt ggattccacg ctcccagagg gataatctaa ctcctgatgt aattcagaat       480
     ttcctggcat atgtacctcc atctcatgca atagataatc aacttgcttc aggaattgaa       540
     gttgagaact gggcaattga ggttgctaaa gcatatggag ttaatataca ggaattttat       600
     cgtacaattt tgccagcttg gattgtgaac tgtatagtga acggtactag cgacgaaagg       660
     aagaatgaga agtcatggcg agcagttgaa ttgaattctc agggggaaga tgttgatgat       720
     tttgagtatc caatggagcc aatgtacaaa tttgcattgc caactatgag gaaggttatg       780
     agaaacttct ctagccaagc tatcctcatg tatcagaata gtgttgctgc aggtaaggcg       840
     tttgtgataa aagctgctag aaatgctgga tacacaagca ttgaaaataa atggctaggt       900
     atagattttc ttgccgaggc tcaattgtct cagagtcaac ttgatatcaa gcatcagatt       960
     ctggcagcga atgttggtag aacaaagaca agactgtttg cattagcagc tcctggagat      1020
     gataataatg tagatagaga aaggcacacg acacacgatg tcagtgcaaa caggcacagc      1080
     tacagtggtg ccgcaattga ataaatgaaa tattaggttt tctaattggg tttgaatgag      1140
     attatagctt agttggaaag ctaagttata tttcaaattt aaattcaaat acttaaatat      1200
     tgtatttcgt tttcaagttt ggtggagttt tggatagcca attatatttt ggttagataa      1260
     gccagaatgt attttggaga tctttctcca tatccttttg tttgatgtag aaatacacct      1320
     tgcaaaagtc c                                                           1331
//