Dbfetch

Dbfetch

ID   EU915699; SV 1; linear; genomic RNA; STD; VRL; 714 BP.
XX
AC   EU915699;
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DT   25-AUG-2008 (Rel. 96, Created)
DT   25-AUG-2008 (Rel. 96, Last updated, Version 1)
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DE   Pepino mosaic virus isolate CQC1-3 coat protein (CP) gene, complete cds.
XX
KW   .
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OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
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RN   [1]
RP   1-714
RA   Janssen D.;
RT   "Molecular characterization of Pepino mosaic virus from Almeria, Spain";
RL   Unpublished.
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RN   [2]
RP   1-714
RA   Janssen D.;
RT   ;
RL   Submitted (22-JUL-2008) to the INSDC.
RL   Virology, IFAPA (CAP, Junta de Andalucia), Autovia del Mediterraneo km 420,
RL   La Mojonera, Almeria 04745, Spain
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DR   MD5; 8f13ddd62205d82ab8e619bba23b6609.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..714
FT                   /organism="Pepino mosaic virus"
FT                   /host="tomato"
FT                   /isolate="CQC1-3"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /collection_date="Mar-2007"
FT                   /db_xref="taxon:112229"
FT   gene            1..714
FT                   /gene="CP"
FT   CDS             1..714
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B5LW77"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:B5LW77"
FT                   /protein_id="ACH43121.1"
FT                   /translation="MENQPTASNPSDAPPTAAQAGAQSPADFSNPNTAPSLSDLKKIKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKIVWNILLDSNVPPANWAKLGYQDDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 714 BP; 193 A; 196 C; 146 G; 179 T; 0 other;
     atggaaaacc aacctacagc ttctaaccca tcagatgcac caccaactgc tgctcaagct        60
     ggcgcccaga gcccagccga cttctcaaat cctaatacag ctccttccct aagtgatttg       120
     aagaagatca aatacgtgtc aactgtcact tcagttgcca cgcctgctga aattgaggcc       180
     cttggcaaga tctttactgc catgggttta gcagccaatg agaccggacc tgccatgtgg       240
     gacctcgctc gtgcttatgc tgatgtgcaa agttcaaaat ctgcacaact tataggtgcc       300
     acaccatcca accctgcttt gtctagacgt gcacttgctg cacagtttga tcgtatcaat       360
     atcacaccca gacaattctg catgtatttt gcaaaaattg tttggaacat actgttagac       420
     agcaatgtgc cacctgccaa ctgggcaaaa ttgggctatc aggacgatac caagtttgct       480
     gcttttgact tctttgatgg agtcacaaat ccagctagtc tacagcctgc agatggccta       540
     atcaggcagc ccaatgaaaa agagcttgct gctcactcgg ttgctaaata tggtgccctt       600
     gcccgccaga aaatatccac tggtaactac atcaccaccc ttggtgaagt tacacgtggt       660
     cacatgggcg gcgccaacac tatgtacgca attgatgcac ctcctgaact ttaa             714
//