Dbfetch
ID EU914817; SV 1; circular; genomic DNA; STD; VRL; 2660 BP. XX AC EU914817; XX DT 26-AUG-2008 (Rel. 96, Created) DT 11-APR-2025 (Rel. 144, Last updated, Version 4) XX DE Okra mottle virus isolate 6319 segment DNA-A, complete genome. XX KW . XX OS Okra mottle virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2660 RX PUBMED; 22941555. RA Albuquerque L.C., Aranha S.A., Fernandes F.R., Inoue-Nagata A.K.; RT "Further evidence reveals that okra mottle virus arose from a double RT recombination event"; RL Arch. Virol. 158(1):181-186(2013). XX RN [2] RP 1-2660 RA Aranha S.A., Inoue-Nagata A.K.; RT "Complete genome sequence of a new begomovirus species infecting okra"; RL Unpublished. XX RN [3] RP 1-2660 RA Aranha S.A., Inoue-Nagata A.K.; RT ; RL Submitted (19-JUL-2008) to the INSDC. RL Virology, Embrapa Vegetables, Km 9 BR 60, Brasilia, DF 70359970, Brazil XX DR MD5; 26fd415e1de7158811bfaeaca636f969. XX FH Key Location/Qualifiers FH FT source 1..2660 FT /organism="Okra mottle virus" FT /segment="DNA-A" FT /host="okra" FT /isolate="6319" FT /mol_type="genomic DNA" FT /geo_loc_name="Brazil" FT /isolation_source="leaf" FT /collected_by="Alice K Inoue-Nagata" FT /collection_date="Feb-2008" FT /clone="13" FT /db_xref="taxon:619599" FT gene 259..1014 FT /gene="AV1" FT CDS 259..1014 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="CP" FT /protein_id="ACH48034.1" FT /translation="MPKRDPSWRQMAGTSKVSRTTNFSPRGGGGPKYNKASEWVHRPMY FT RKPRIYRMIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMEFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(1011..1409) FT /gene="AC3" FT CDS complement(1011..1409) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="REn" FT /protein_id="ACH48036.1" FT /translation="MDSRTGEFITAPQTENGVYIWEVPNPLYFKIYNLEDLPYTRTRIY FT HIQIRFNHNLRRALGLHKAYLNFQVWTTSLTASGTTYLARFKMLVMMYLDQLGVIAINN FT VIRAVRFATDRPYVSYVLENHSIKFKLY" FT gene complement(1156..1545) FT /gene="AC2" FT CDS complement(1156..1545) FT /codon_start=1 FT /gene="AC2" FT /product="transactivation protein" FT /note="Trap" FT /protein_id="ACH48037.1" FT /translation="MLNSSSSTPPSIKPRHRIAKKRAIRRRRVDLECGCSIYVHFNCNG FT HGFTHRGIHNCTSDREWRLYLGGSKSPLFQDIQPRGSTVHENQNIPHTDKVQPQPQESI FT GSPQGLPQLPSLDDFSDSFWDDIFS" FT gene complement(1466..2545) FT /gene="AC1" FT CDS complement(1466..2545) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /note="Rep" FT /protein_id="ACH48035.1" FT /translation="MPSKPRRFRLQAKNIFLTYPQCSLTKEEALSQLQAIQLPSNKKFI FT KICRELHENGEPHLHVLLQLEGKVQITNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKSY FT IDKDGDTVEWGDFQVDGRSSRGGQQTANDAAAEALNAPDKQTALQLIREKLPEKYLFQF FT HNLNSNLDRIFSKAPEPWVPPFNLSSFTNVPDEMQEWADEYFGRGSAARPFRPMSLIVE FT GDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNEVEYNVIDDVTPQYLKLKHWKELIGA FT QKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENAALKSWTLHNAKFIFL FT DAPLYQTETQDCQEESHQA" XX SQ Sequence 2660 BP; 669 A; 592 C; 637 G; 762 T; 0 other; accggatggc cgcgcgattt ttcccccctt tcttgacgtg gcgctctggt ggccgcccga 60 tcctcctctc cctctccgct ctcgtggagt acaccttgcc cgcgcgctgt tctcctttaa 120 ttcaaattaa aggatttaac ttttgtccga ccaattatag tgcgcctgag gagcctagat 180 atttgcgaaa gacttgggcc ctaagttgtt ggacgactat ataattaagt catgtatgac 240 gtcagtaatt atttcaaaat gcccaagcgg gatccctcat ggcgccagat ggcgggaacc 300 tcaaaggtta gccgcactac caacttttcc cctcgtggag gtggaggccc aaagtacaac 360 aaggcctcgg agtgggttca caggcctatg tataggaagc ccaggatata caggatgata 420 aggactcctg atgttccaag aggctgtgaa gggccctgca aggttcaatc ctacgagcag 480 cgtcacgaca tctcacatgt cgggaaggtc atgtgcatat ctgatgtcac acgtggcaat 540 ggtataaccc accgtgtcgg taagcgtttc tgcgttaagt ctgtgtacat tttagggaag 600 atatggatgg acgagaacat caagctcaag aaccacacga acagtgtcat attctggttg 660 gtcagagacc gtagaccgta tggtacccct atggagtttg gccaggtgtt taacatgttt 720 gacaacgagc ccagcactgc tacggtgaag aacgatctcc gtgatcgtta tcaagtcatg 780 cacaagttct atgccaaggt cactggtggt caatatgcca gcaacgaaca ggctctggtc 840 aagaggttct ggaaggtcaa caatcatgtg gtgtacaatc accaggaggc tgggaagtat 900 gagaatcaca cggagaatgc tctgttactg tatatggcat gtactcatgc ctctaaccct 960 gtgtatgcaa cgcttaagat tcggatctat ttctacgatt cgatcacgaa ttaataaagt 1020 ttgaatttta ttgaatgatt ttcgagtaca taactgacat atggcctgtc tgttgcgaaa 1080 cgaacagctc taattacatt attaatggca attacaccta attggtctaa gtacatcatg 1140 actagcatct taaacctagc taaatatgtc gtcccagaag ctgtcagaga agtcgtccag 1200 acttggaagt tgaggtaggc cttgtggaga cccaatgctc tcctgaggtt gtggttgaac 1260 cttatctgta tgtggtatat tctggttctc gtgtacggta gatcctctag gttgtatatc 1320 ttgaaataga ggggatttgg aacctcccag atatagacgc cattctctgt ctgaggtgca 1380 gttatgaatt ccccggtgcg tgaatccatg gccgttgcag ttgaagtgga cgtatatcga 1440 gcagccgcac tctaggtcca ctcgtctacg cctgatggct ctcttcttgg caatcctgtg 1500 tctcggtttg atagaggggg gcgtcgagga agatgaattt agcattgtgg agtgtccacg 1560 atttcagagc tgcattttcc tccttgtcta ggaagtcttt atagctagcc ccctctccag 1620 gattgcacag cacgattgat gggatgccac ctttaatttg aactggcttt ccgtatttgc 1680 aatttgactg ccagtctttt tgagcaccaa tcaattcctt ccagtgcttt aactttagat 1740 attgcggtgt gacatcgtca atgacgttgt attccacttc gttcgagtaa accttagaat 1800 tgaagtccag atgaccactc aagtaattat gtgggcctaa cgcacgagcc cacatcgtct 1860 tccctgtcct tgaatcacct tcgactatca aactcatagg tctgaatggc cgcgcagcgg 1920 aacctctccc aaaatattca tcggcccact cttgcatctc gtcgggaacg ttagtgaagg 1980 aggagaggtt aaacggagga acccacggct ccggagcctt tgagaaaatt ctatctaaat 2040 tagaatttaa attatgaaac tgaaaaagat atttctctgg caatttttcc cgaattaact 2100 gaagagccgt ctgtttatca ggagcgttta acgcctcagc tgcagcgtca ttagctgtct 2160 gttggcctcc cctagaactc cttccgtcga cctggaagtc accccattct actgtatctc 2220 catctttgtc gatgtaagac ttgacgtcgg agctggattt agctccctga atgttcggat 2280 ggaaatgtgc tgaccttgtt ggggaaacca ggtcgaacaa tctgttattt gtgatttgga 2340 cctttccttc caattgcaac aggacgtgga ggtgaggttc cccattttcg tgaagctctc 2400 tgcaaatctt gatgaatttc ttattagagg gtaattgaat agcttgcaat tgggaaagtg 2460 cctcctcttt tgtaagagag cactgtggat aagtaaggaa aatgttttta gcttggagtc 2520 taaaacgacg tggtttggat ggcatttttg taaataaggg agtgtactcc gcttgagagc 2580 tcgctcataa gtctatatga attggagtat ggagtacaat atatagtaat aggagttcct 2640 aaggccatcc gtataatatt 2660 //