Dbfetch
ID EU910140; SV 1; linear; genomic DNA; STD; VRL; 2769 BP. XX AC EU910140; XX DT 10-AUG-2008 (Rel. 96, Created) DT 10-AUG-2008 (Rel. 96, Last updated, Version 1) XX DE Tomato leaf curl Kerala virus isolate ToLCV-K5 segment DNA A, complete DE sequence. XX KW . XX OS Tomato leaf curl Kerala virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2769 RA Mukhopadhyay S., Pandey P., Nazeem P.A., Mukherjee S.K.; RT ; RL Submitted (18-JUL-2008) to the INSDC. RL Plant Moleculer Biology, ICGEB, Aruna Asaf Ali Marg, New Delhi, Delhi RL 110067, India XX DR MD5; 642a4e63d0b64e51b2d54d80241d53a8. DR EuropePMC; PMC3002923; 21092241. XX FH Key Location/Qualifiers FH FT source 1..2769 FT /organism="Tomato leaf curl Kerala virus" FT /segment="DNA A" FT /host="Solanum lycopersicum (tomato)" FT /isolate="ToLCV-K5" FT /mol_type="genomic DNA" FT /country="India" FT /db_xref="taxon:551531" FT gene 145..501 FT /gene="AV2" FT CDS 145..501 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B5B3W2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B5B3W2" FT /protein_id="ACG49269.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHTRFEGTPPSQLRQPICQPCCCPHCPRHKVKSMGEQAHEQ FT KAQDVQDVQKPRCP" FT gene 305..1075 FT /gene="AV1" FT CDS 305..1075 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B5B3W3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B5B3W3" FT /protein_id="ACG49270.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKSRAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFEQRHDISHIGKVMCISDVTRGIGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVSNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1078..1482) FT /gene="AC3" FT CDS complement(1078..1482) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:B5B3W4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5B3W4" FT /protein_id="ACG49271.1" FT /translation="MDSRTGEPITAAQAENGVFIWEIQNPLFFKITEHHNRPFLMNQDI FT ITVQVQFNHNLRKVLGIHKCFLVFRIWMTSQPQTGRFLRVFKTQVYKYLNNLGVISINN FT VIRAVDHVLWNVLHHIVYVDQTYSIKYNLY" FT gene complement(1223..1627) FT /gene="AC2" FT CDS complement(1223..1627) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:B5B3W5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5B3W5" FT /protein_id="ACG49272.1" FT /translation="MRSSSPSKAHCTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPIFQDNRTPQPAIPDEPRHHHRPSTVQSQP FT EESVGDTQMFPSLPNLDDLTASDWSFLKGL" FT gene complement(1530..2612) FT /gene="AC1" FT CDS complement(1530..2612) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /note="replication initiator" FT /db_xref="GOA:B5B3W6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5B3W6" FT /protein_id="ACG49273.1" FT /translation="MPPKRFLINSKNYFLTYPKCSLTKEEALSQLQNLPTPTNKKYIKI FT CRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLE FT KDGDTLDWGEFQIDGRSARGGHQSAYDAYAAALNAGSKSEALRVIKELAPKDYVLQFHN FT LNANLDRIFTPPMEVYVSPFLSSSLNQVPEELEEWAADNVVSAAARPLRPVSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKNWALKNAIFVTLEGPLY FT SGTNQSAAQASQEGDQASTC" FT gene complement(2168..2464) FT /gene="AC4" FT CDS complement(2168..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5B3W7" FT /protein_id="ACG49274.1" FT /translation="MKMGNLIFTCSSSSKENTSAKITDSSTWYPQPDQHISIRTFRELN FT QAQTSSPIWRRTETPSTGESFRSMEDLQEGDTSQRMMLTPQRLTQAVSQRLLE" XX SQ Sequence 2769 BP; 742 A; 540 C; 628 G; 859 T; 0 other; accggatggc cgcgattttt ttttgtgggc cccataaagc actaactgac aacgactagt 60 ggaccaatca catgacgcgc tcaaagctta attgttttgt ggtcccctat ttatactttg 120 gcactaagta ttgtacattg caaaatgtgg gatccattgt taaacgagtt tcccgatact 180 gttcacggtt ttagatgtat gttagcaatt aaatatctac agttagtaga aaacacctat 240 tctcctgaca cattaggtta cgatttaatt agggatttaa tttcagttat tagggctaga 300 aattatgtcg aagcgaccag cagatataat catttccaca cccgcttcga aggtacgccg 360 ccgtctcaac ttcgacagcc catatgtcag ccgtgctgct gcccccattg tccgcgtcac 420 aaagtcaaga gcatgggcga acaggcccat gaacagaaag cccaggatgt acaggatgta 480 cagaagccca gatgtcccta gaggatgtga aggcccatgt aaggtacaat catttgagca 540 aaggcatgat atttctcata ttgggaaggt catgtgtatt agtgatgtta ctcgtgggat 600 tgggctaact catagggttg gtaagcgttt ctgtgttaaa tccgtttacg ttttgggtaa 660 gatatggatg gatgagaata tcaagaccaa gaatcacacg aatagtgtta tgttttttct 720 tgttcgtgat cgtcgtcctg ttgacaagcc acaagacttt ggagaggtgt tcaatatgtt 780 tgacaatgag cctagcactg ctactgtgaa gaatgtgcat cgagatcgtt atcaggtgtt 840 gaggaagtgg catgcaactg tcactggtgg tcagtacgct tcaaaggaac aggcattagt 900 gaagaagttt gttagggtta ataattatgt tgtctctaac cagcaagagg ctggcaaata 960 tgagaatcat tctgagaatg ctttgatgtt gtatatggca tgtactcatg cctctaatcc 1020 tgtgtacgct acgcttaaga ttcgtattta cttctatgat tctgtaacaa actgatatta 1080 ataaagattg tattttattg aatatgtttg gtctacatat acaatgtggt gtaatacatt 1140 ccataataca tgatcaactg ctctaattac attgttaata ctgatgactc ctaaattatt 1200 taaatattta tacacttggg tcttaaagac ccttaagaaa cgaccagtct gaggctgtga 1260 ggtcatccag attcggaaga ctaggaaaca tttgtgtatc cccaacactt tcctcaggtt 1320 gtgattgaac tgtacttgga cggtgatgat gtcttggttc atcaggaatg gccggttgtg 1380 gtgttctgtt atcttgaaaa ataggggatt ttgaatctcc cagataaaca cgccattctc 1440 tgcttgagct gcagtgatgg gttcccctgt gcgtgaatcc atggttgtgg caggctaatg 1500 caatgaagta tgaacagccg cacggtagat caacacgtcg acgcctggtc cccttcttgg 1560 ctagcctgtg ctgcactttg attggtacct gagtacaatg ggccttcgag ggtgacgaag 1620 atcgcatttt ttaatgccca gttttttagt gcagaattct tatcttcatc caagaactct 1680 ttatagctgg aatttggtcc tggattgcag aggaagatag tgggaattcc gcctttaatt 1740 tgaactggtt tcccgtactt tgtatttgat tgccagtccc tttgggcccc catgaattct 1800 ttaaagtgct ttagatagtg ggggtctacg tcatcaatga cgttatacca ggcatcatta 1860 ttgtagacct ttggactaag gtctaaatga ccacacagat aattatgtgg tcccagtgat 1920 ctggcccaca tagtctttcc tgtcctactg tcaccctcaa tgactatact tacaggtctc 1980 aaaggccgcg cagcggcact gacgacgttg tcggcagccc actcttcaag ttcttctgga 2040 acttgattca aggaagaaga taaaaaaggg gaaacataaa cctccatagg aggtgtaaaa 2100 atcctatcta aattagcatt taaattatga aactgtagta cataatcttt tggtgctaat 2160 tctttaatta ctctaagagc ctctgactta ctgcctgcgt taagcgctgc ggcgtaagca 2220 tcatacgctg actggtgtcc ccctcttgca gatcttccat cgatctgaaa ctctccccag 2280 tcgagggtgt ctccgtcctt ctccagatag gacttgacgt ctgagcttga tttagctccc 2340 tgaatgttcg gatggaaatg tgctgatctg gttggggata ccaggtcgaa gaatctgtta 2400 ttttggcact tgtattttcc ttcgaactgg atgagcacgt gaagatgagg ttccccattt 2460 tcatgaagct ctctgcagat ttttatgtat tttttgttgg ttggtgttgg taggttttgt 2520 aattgggaaa gtgcttcctc tttggtgaga gagcatttgg gatatgttag gaaataattt 2580 ttggagttaa taaggaaacg ctttggaggc atgttgacta agatagagga cccgattgac 2640 tgctcttgca actctcccct gtatatcagg tctcaatata tagtgagacc caaatggcat 2700 aatggtaatt aaaaaaacat taatttgaaa ttcaaaacaa aaggctaaag cggccatccg 2760 tataatatt 2769 //