ID EU908733; SV 1; circular; genomic DNA; STD; VRL; 2684 BP. XX AC EU908733; XX DT 17-SEP-2008 (Rel. 97, Created) DT 17-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Sida micrantha mosaic virus - [Brazil:okra] isolate 5157 segment DNA-A, DE complete sequence. XX KW . XX OS Sida micrantha mosaic virus - [Brazil:okra] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2684 RA Aranha S.A., Albuquerque L.C., Inoue-Nagata A.K.; RT "Molecular and biological characterization of an okra begomovirus in RT Brazil"; RL Unpublished. XX RN [2] RP 1-2684 RA Aranha S.A., Albuquerque L.C., Boiteux L.S., Inoue-Nagata A.K.; RT "First confirmed report of an okra begomovirus in Brazil"; RL Unpublished. XX RN [3] RP 1-2684 RA Aranha S.A., Albuquerque L.C., Inoue-Nagata A.K.; RT ; RL Submitted (17-JUL-2008) to the INSDC. RL Virology, Embrapa Vegetables, Km 9 BR 60, Brasilia, DF 70359970, Brazil XX DR MD5; 16b0861abdfd00aca6420bcd62f690a6. XX FH Key Location/Qualifiers FH FT source 1..2684 FT /organism="Sida micrantha mosaic virus - [Brazil:okra]" FT /segment="DNA-A" FT /host="okra" FT /lab_host="Nicotiana benthamiana" FT /isolate="5157" FT /mol_type="genomic DNA" FT /country="Brazil" FT /isolation_source="leaf" FT /collected_by="Alice K Inoue-Nagata" FT /collection_date="Apr-2007" FT /clone="15" FT /db_xref="taxon:555980" FT gene 277..1032 FT /gene="AV1" FT CDS 277..1032 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:B5TEV9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B5TEV9" FT /protein_id="ACH48027.1" FT /translation="MPKRDPSWRQMAGTSKVSRSTNFSPRGGGGPKYNKASEWVHRPMY FT RKPRIYRMIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(1029..1427) FT /gene="AC3" FT CDS complement(1029..1427) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="REn" FT /db_xref="GOA:B5TEW0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5TEW0" FT /protein_id="ACH48030.1" FT /translation="MDSRTGEFITAPQAENGVYIWEITNPLYFKTYNVEDPLYTRTRVY FT HIQIRFNHNLRRALGLHKAYLNFQVWTTSLTASGTTYLIRLRRLVMMYLDQLGVISLNN FT VIRAVRFATDKAYVNYVLEDHDIKFKFY" FT gene complement(1174..1563) FT /gene="AC2" FT CDS complement(1174..1563) FT /codon_start=1 FT /gene="AC2" FT /product="transactivation protein" FT /note="Trap" FT /db_xref="GOA:B5TEW1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5TEW1" FT /protein_id="ACH48029.1" FT /translation="MLNSSSSTPPSIKPRHRIAKKRAIRRRRVDLECGCTIYQHLNCTG FT HGFTHRGIHNCTSGREWRLYLGDNKSPVFQDVQRRGSAVHEDKSVSHTDKVQPQPQESI FT GSPQGLPELPSLDDFSDSFWNDLFD" FT gene complement(1484..2560) FT /gene="AC1" FT CDS complement(1484..2560) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /note="Rep" FT /db_xref="GOA:B5TEW2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5TEW2" FT /protein_id="ACH48028.1" FT /translation="MPPPKRFKISAKNYFLTYPQCSLTKEETLSQLQSLATPVNKKFIK FT ICRELHENGEPHLHVLIQFQGKFQCTNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLDWGEFQVDGRSARGGCQTANDAVAEALNAPSKEAALQIIREKLPEKFLFQFH FT NLNSNLDKLFAKAPEPWAPPFRLSSFTNVPDEMQEWADDYFGRGSAARPLRPISLIVEG FT GSRTGKTMWARALGPHNYFSGHLDFNSKVYSDQVEYNVIDDVAPHYLKLKHWKELIGAQ FT QKWQTNCKYGKPRLIEGGVPSIVLCNPGEGASYKDFLDKEENAALRGWTLHNAKFIFLD FT APLYQTETQDCQEESNQA" FT gene complement(2146..2409) FT /gene="AC4" FT CDS complement(2146..2409) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5TEW3" FT /protein_id="ACH48031.1" FT /translation="MKMGSLISTSLSSSRGNSNARITDSSTWYPQPGQHISILTYRELN FT HRPTSSPTSTRTEILSIGENSRSTEEVLEAVAKQLTTLWQKP" XX SQ Sequence 2684 BP; 653 A; 626 C; 651 G; 754 T; 0 other; accggatggc cgcgcgattt ttcccccccc cacgtggcgc gctggtggtc gtgcgatctc 60 tccccccctc tctcgcgcga cgtggagctc tggtgtccgc gcgttccccc ccgcgcgctc 120 cgcctttaac cctttaattt aaattaaagg aaataacttt catcaggacc aatgaaattg 180 cgtctttaaa gcctagatat ttgcgaaaga cttgggccct aagttgtttg acgagtatat 240 aattaagtca ctcatgacgt caggaattat ttcgaaatgc ccaagcggga tccctcatgg 300 cgccagatgg cgggaacctc aaaggttagc cgctctacta acttttcccc tcgtggagga 360 ggaggcccaa agtacaacaa ggcctcggaa tgggttcaca ggcccatgta taggaagccc 420 aggatataca ggatgataag gactcctgat gttccaagag gctgtgaagg gccctgtaag 480 gtccagtcct acgagcagcg tcacgacatc tcacatgtcg gcaaggtcat gtgcatatct 540 gatgtcacac gtggcaacgg tataacccac cgtgtcggta agcgtttctg cgttaagtct 600 gtgtacattt tagggaagat atggatggac gagaacatca agctcaagaa ccacacgaac 660 agtgtcatgt tctggttggt cagagaccgt agaccgtatg gtactcctat ggactttggc 720 caggtgttca acatgtttga caacgagccc agcactgcta cggtgaagaa cgatcttcgt 780 gatcgttatc aagttatgca caagttctac gccaaggtca ctggtggtca atatgccagc 840 aatgaacagg ctctggtcaa gaggttctgg aaggtcaaca atcatgtggt gtacaaccac 900 caggaagctg gcaagtatga gaatcacacg gagaatgctt tgttactgta tatggcatgt 960 actcatgcct ctaaccctgt gtatgcaacg cttaagattc ggatctactt ctacgattcg 1020 ataaccaatt aataaaattt gaattttata tcatgatctt caagtacata gtttacatag 1080 gctttgtcag tggcaaagcg aacagctcta attacattgt taagggaaat tacacctaat 1140 tgatctaaat acatcattac aaggcgtcta agcctaatca aataagtcgt tccagaagct 1200 gtcagagaag tcgtccagac ttggaagttc aggtaggcct tgtggagacc caatgctctc 1260 ctgaggttgt ggttgaacct tatctgtatg tgatacactc ttgtcctcgt gtacagcgga 1320 tcctctacgt tgtacgtctt gaaatacagg ggatttgtta tctcccagat atagacgcca 1380 ttctctgcct gaggtgcagt tatgaattcc ccggtgcgtg aatccatggc cggtgcagtt 1440 gagatgttgg tatatggtgc agccgcactc taggtccact cgtctacgcc tgattgctct 1500 cttcttggca atcctgtgtc tcggtttgat agaggggggc gtcgaggaag atgaatttag 1560 cattgtgtag tgtccaccct ctcaatgctg cattttcctc tttgtctagg aagtctttat 1620 agctggcccc ctccccagga ttgcacaaca cgattgaagg gaccccacct tcaatcaaac 1680 gaggctttcc gtatttgcag tttgtctgcc atttctgttg ggcccctatt agctctttcc 1740 agtgtttcaa ctttaggtaa tgcggagcga cgtcatcgat gacgttatac tccacttgat 1800 ctgaatatac ctttgagttg aaatccagat ggccactgaa gtaattatgt gggcctaatg 1860 ctctagccca catcgtttta cccgttctgc tacctccttc aacaattaaa cttatgggcc 1920 ttaatggccg cgcagcggaa cctctcccaa aataatcatc ggcccactct tgcatctcgt 1980 ctggcacgtt agtgaatgag gagagtcgaa acggaggggc ccatggctcc ggagccttgg 2040 caaagagctt atctaaatta ctatttagat tgtggaactg gaataagaac ttttccggta 2100 acttctcccg gattatctgc aaggctgcct cttttgaagg ggcgttcaag gcttctgcca 2160 cagcgtcgtt agctgtttgg caaccgcctc tagcacttct tccgtcgacc tggaattctc 2220 cccaatcgag agtatctccg tccttgtcga tgtaggactt gacgtcggac gatgatttag 2280 ctccctgtat gttaggatgg aaatgtgctg acctggttgg ggataccagg tcgaagagtc 2340 tgttattcgt gcattggaat ttcccctgga actggataag gacgtggaga tgaggctccc 2400 cattttcatg gagctctctg cagattttga tgaacttctt gtttactggt gttgctaagc 2460 tctgtaattg ggaaagtgtc tcctctttgg ttaaggagca ctggggatat gtcaagaaat 2520 aattcttggc acttatttta aaacgctttg gcggtggcat ttttgtaaat aaggggtgta 2580 ccccgattga gagctcgctc tataagtcat atgtattggg gtaaagggga caatatatag 2640 tagaagatcc taagggcctt taagcggcca tccgcactaa tatt 2684 //