ID EU888298; SV 2; linear; genomic RNA; STD; VRL; 2912 BP. XX AC EU888298; XX DT 18-AUG-2008 (Rel. 96, Created) DT 23-OCT-2009 (Rel. 102, Last updated, Version 3) XX DE Indian Narcissus potyvirus isolate 2 Lucknow polyprotein gene, partial cds. XX KW . XX OS Indian Narcissus potyvirus OC Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus. XX RN [1] RP 1-2912 RA Yadav N., Khan J.A.; RT "Potyvirus isolates associated with severe mosaic disease of Narcissus sp. RT in India"; RL Unpublished. XX RN [2] RP 1-2912 RA Yadav N., Khan J.A.; RT ; RL Submitted (16-JUL-2008) to the INSDC. RL Plant Virus Lab, National Botanical Research Institute, Rana Pratap Marg, RL Lucknow, U.P. 226 001, India XX RN [3] RC Sequence update by submitter RP 1-2912 RA Yadav N., Khan J.A.; RT ; RL Submitted (21-OCT-2009) to the INSDC. RL Plant Virus Lab, National Botanical Research Institute, Rana Pratap Marg, RL Lucknow, U.P. 226 001, India XX DR MD5; 3e9fe2a18b960c7dbd63cb3b514d3611. XX CC On Oct 21, 2009 this sequence version replaced gi:196050515. XX FH Key Location/Qualifiers FH FT source 1..2912 FT /organism="Indian Narcissus potyvirus" FT /host="Narcissus sp." FT /isolate="2 Lucknow" FT /mol_type="genomic RNA" FT /country="India" FT /isolation_source="infected leaf tissue" FT /collection_date="Jan-2004" FT /clone="GU3" FT /db_xref="taxon:407055" FT CDS <1..2679 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:B5B300" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:B5B300" FT /protein_id="ACG68431.2" FT /translation="WISTKDGQCGTPIVSTRDGAILGLHSLSNFANSINYFSSFPGEFT FT ERYLDTHENHEWAKHWKYNTSSISWGSLNIKAAQPKGMFNTTKLVMDLDDTAVYSQMAR FT GGWMYNQLHGNLKAAASVPSQLVTKHTVKGKCQMFDLYLRLHDKERAFFEPLMGFYQKS FT RLNKEAYGKDLMKYASVIEVGLVDCEIFELALAAVIDDLEMLGFQECNYITDETCIFEA FT LNMKSAVGALYQGKKKDYFADYTQEMKEQILYESCERLYKGEMGVWNGSLKAELRPVEK FT VEANKTRTFTAAPIDTLLAGKVCVDDFNNQFYDHHLHGPWSVGMTKFYGGWNTLLNKLP FT DGWIHCDADGSQFDSSLSPYLINAVLRIRQSFMETWQVGEQMLSNPYTEIVYTPISTPD FT GTLVKKFKGNNSGQPSTVVDNTLMVVLAMRYSLLKAGLPFKQHKDMCKFVVNGDDLLLS FT LAPEYEHVLDTLTERFSELGLKYTFSSRTTNKQELWFMSHKGVLREGIWIPKLEQERIV FT SILEWDRSKEPEHRLEAICAAMIESWGYDTLTREIRKFYSWLLSQAPYSGLAQEGKAPY FT IAESALRKLYVDKDVEQSDISMYVEAIFEDYVEGEFSEVFHQSGKQALDAGLEEDRSPQ FT KDKGKQSMASEVRKDNAQIRDKDVNVGVQGSFPVPRLKTLTGKMNLPLHKRRVVLNLEH FT LLSYSPNQVDLSNTRATQNQFASWYEGVKSEYDVDDDKMAIILNGFMVWCMENGTSPNI FT NGVWVMMDGDEQVEFPLKPIIDHAKSTLRQIMAHFSNVAEAYIERRNYDRPYMPRYGLQ FT RNLTDMSLARFAFDFYEMTSKTPVRAREAHIQMKAAALRGAKNHLFGLDGNVGSADENT FT ERHTTDDVNRNMHNLLGVRGV" FT mat_peptide <1..303 FT /product="NIa" FT mat_peptide 304..1854 FT /product="NIb" FT /note="replicase" FT mat_peptide 1855..2676 FT /product="coat protein" FT /note="CP" FT 3'UTR 2680..2912 XX SQ Sequence 2912 BP; 934 A; 564 C; 696 G; 718 T; 0 other; tggataagca caaaggatgg gcagtgtggt acaccaatag tcagcactag agatggtgca 60 attttaggat tacacagtct gtccaatttc gcaaactcaa ttaactactt ctctagcttt 120 ccaggtgagt tcacagaacg ctacctagac acacatgaaa atcatgaatg ggcaaagcat 180 tggaaataca acacttcaag catcagctgg ggctcactga acatcaaggc agcgcagcct 240 aaagggatgt tcaacacaac taagcttgta atggacttgg atgacacagc agtgtactct 300 caaatggcaa gagggggctg gatgtacaat caacttcatg ggaatctcaa agcagcagca 360 tcagtcccca gtcagctagt cacaaagcat acagtgaagg ggaaatgtca aatgttcgat 420 ctttacttga gacttcatga taaagaacga gcattcttcg aaccattgat gggattttat 480 cagaaaagtc gattgaacaa agaggcatac ggtaaagact taatgaaata cgcatcagtc 540 attgaagttg gactggttga ttgcgaaata tttgagctag ccctggcagc tgtgatagac 600 gacttagaga tgttgggctt tcaagagtgt aattacatta cagacgagac ctgtatattt 660 gaagccttaa acatgaagtc agccgttggt gcgctgtacc aaggcaagaa gaaggattac 720 tttgccgact acactcagga aatgaaggaa cagattttat atgaaagctg tgaacggctt 780 tacaaaggtg aaatgggtgt atggaatggt tctctcaagg ctgagttgag accagtggaa 840 aaggttgaag caaataagac acgaaccttc acagcagcgc caattgacac actccttgcg 900 ggtaaggtgt gtgttgatga ttttaataat caattctatg accatcatct acatggaccg 960 tggagtgtcg ggatgacaaa attttatggg ggttggaaca cactacttaa taaattacca 1020 gacggttgga ttcattgtga tgcggacggt tcgcagtttg atagctcttt gtccccgtat 1080 ttaatcaacg ctgtgttacg aattagacag agcttcatgg aaacatggca agttggggaa 1140 cagatgcttt cgaatccgta cacagagatt gtatacactc caatttcaac accagacggt 1200 actctagtta agaagttcaa aggaaacaac agtgggcagc cttcaactgt agttgacaac 1260 acactcatgg ttgtcttggc gatgagatat tcacttctaa aagcagggtt acccttcaaa 1320 cagcacaagg atatgtgcaa gtttgttgtt aacggggatg acttgctact aagcctagcg 1380 ccagagtacg aacatgtttt ggacaccctg actgagaggt tctctgaatt aggtctcaag 1440 tacacattca gctcacggac gacaaacaag caggaacttt ggttcatgtc acacaaggga 1500 gttcttaggg aagggatctg gataccaaaa cttgagcaag aacgaattgt atctattttg 1560 gagtgggata gatccaagga acccgagcat agactggaag ccatctgtgc ggccatgatt 1620 gaatcatggg gttatgacac actcacacgc gagataagaa agttctactc atggctacta 1680 tctcaggcgc catatagcgg actggcacaa gaaggaaaag caccatatat tgctgaatca 1740 gctctcagaa agttgtatgt agacaaggac gtggagcaaa gcgatatatc gatgtacgtc 1800 gaagccatct ttgaggatta cgtcgaaggt gaattctctg aagtgttcca tcaatccggc 1860 aaacaagcac ttgatgctgg tttagaggag gatagaagtc cacagaaaga caaaggaaag 1920 caaagcatgg ccagtgaagt gcggaaagac aatgcacaaa ttcgcgataa ggacgtgaat 1980 gttggtgtgc aaggttcatt tccagtacct cgcctgaaaa cactgactgg gaaaatgaac 2040 ctaccactcc acaagaggcg ggttgtgttg aatctagagc atttgttatc ttattcacca 2100 aatcaggttg atctctcaaa caccagagcc actcagaatc aatttgcatc atggtatgag 2160 ggagtgaagt cagaatatga tgtggatgac gataaaatgg ctataatctt aaacggcttc 2220 atggtatggt gtatggagaa cggaacttca ccaaacataa acggagtgtg ggtaatgatg 2280 gacggagatg aacaagttga gtttccactc aaacccatca ttgatcacgc caaatccaca 2340 ctcaggcaaa taatggccca tttcagtaac gttgctgaag cgtatattga aagaaggaac 2400 tatgacagac catacatgcc acgttatggt cttcagcgta atttaaccga catgagcttg 2460 gcacgctttg cctttgactt ctatgaaatg acgtcaaaga cgccagtccg agcgcgagaa 2520 gcgcacatcc aaatgaaagc ggctgcacta cgtggagcta agaatcactt atttgggctg 2580 gatggaaatg tcggatcagc agacgagaac acggaaagac acaccaccga cgatgtaaat 2640 aggaacatgc acaaccttct aggcgtgagg ggtgtgtaat tgttgtgtcg atatttataa 2700 tgagatatat ccatatagat atccgttagt attctcatcg tagagaagta ttttatatag 2760 tgtttaagcc agttgggttg gacccagagt gcaccacttt atctatatac tttgttcgaa 2820 tacattgtac ctactaaggg aacagtgaga gcctctctcg aactccttta ctaagtatag 2880 tgtgctagag aaaaaaaaaa aaaaaaaaaa aa 2912 //