ID EU881936; SV 2; linear; genomic RNA; STD; VRL; 5870 BP. XX AC EU881936; FJ194941; XX DT 04-SEP-2011 (Rel. 110, Created) DT 16-MAR-2012 (Rel. 112, Last updated, Version 4) XX DE Cucurbit mild mosaic virus segment RNA1 205 kDa polyprotein gene, complete DE cds. XX KW . XX OS Cucurbit mild mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Fabavirus. XX RN [1] RP 1-5870 RX DOI; 10.1007/s00705-011-1202-x. RX PUBMED; 22187104. RA Dong S.W., Xiang H.Y., Shang Q.X., Li D.W., Yu J.L., Han C.G.; RT "Complete genomic sequence analysis reveals a novel fabavirus infecting RT cucurbits in China"; RL Arch. Virol. 157(3):597-600(2012). XX RN [2] RP 1-5870 RA Han C.; RT ; RL Submitted (10-JUL-2008) to the INSDC. RL Plant Pathology, China Agricultural University, Yuanmingyuan West Rd., RL Haidian District, Beijing 100193, China XX RN [3] RC Sequence update by submitter RP 1-5870 RA Han C.; RT ; RL Submitted (09-MAR-2009) to the INSDC. RL Plant Pathology, China Agricultural University, Yuanmingyuan West Rd., RL Haidian District, Beijing 100193, China XX RN [4] RC Sequence update by submitter RP 1-5870 RA Han C.; RT ; RL Submitted (06-JAN-2012) to the INSDC. RL Plant Pathology, China Agricultural University, Yuanmingyuan West Rd., RL Haidian District, Beijing 100193, China XX DR MD5; cbc28d364defdd7c066777d8d1c40c03. XX CC On Jan 6, 2012 this sequence version replaced gi:224708385. XX FH Key Location/Qualifiers FH FT source 1..5870 FT /organism="Cucurbit mild mosaic virus" FT /segment="RNA1" FT /host="cucurbit" FT /isolate="Beijing" FT /mol_type="genomic RNA" FT /country="China" FT /note="acronym: CuMMV" FT /db_xref="taxon:1131416" FT 5'UTR <1..305 FT CDS 306..5783 FT /codon_start=1 FT /product="205 kDa polyprotein" FT /db_xref="GOA:G2XKC3" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:G2XKC3" FT /protein_id="ACK76423.1" FT /translation="MDFETSQRLTGFLKTSFHLSSLQQLVEQEYKGPSATEVKIHLCIY FT HANLMADDMNSGLSDCQIHQAQYITRRFRTVRSFFREMIVTEKVSLAWMAEYNNTTFSN FT WFGYAIVPVEPQISADAKFGQGILEYAQALPKFLFSKAAGALTSTFKLILNCLKDALHQ FT CFGSWIPYLQQSFGWFANVFETLQGWAEAVHNKIGGILGGMEECLYIGMGLTASTCIVA FT LLERFLVATGLLKKPLGAPMLFVTVAVGAICAFSGGAKMMEGVIIDLLMFVKISCSQLL FT SVLFSFSAEEAAEGQFSSTTVLENLAALVSNWSSTSIQDIGRGFAAITQIKTGILSMRD FT MIVFIFEKLSGAAHKLLGIESQVLADLSLLLGENVVDWLAECDAMVQYMLEFKSSARDI FT FDRLSQLIEKGRMMRTGIIKMNHRGSSQVLNLISKALEKLVELHSSMVISGANTARKAP FT FMVFLTGSSGCGKTSVAQRIGANWLQAEGLGTAELYSRNGLDPFWSGYKRQAVVMYDDF FT GAIPGTVSNEAEIIHVVSRNPYATIMPGLAEKGMYFDSRLLLATSNFLAANSESGVHDS FT HAYERRRHVVVRVVLKEGVPYNADFPTENQKYQILESVEPFRFVREFEDYEDLWSYIYD FT RYKTHDEQEASFLNSLPVPDADETEALEALVSLSAMLGSFAPKNVIKYATENLPGYHYL FT VQDGNVVYFWHQNGDIEIVPISKMHLGASEVSQLKQDSLNSALRYQNLAKNFPSLNPLA FT VLYASNIVTKKWIGQDLKATSDCKDEFMVSQINELPTWQRAYLYVLSKHLANAKAGGWF FT SNLLDETKKAMRQLYAKEYKSWPMALKLAVGSMLAVVVCGSVYAVLSMLWSMGTGAAFF FT SGAAAVFTAQTVEGQSDIPNKNESEYLFRNKRVRVRNWDAQAACYGDSAQWMMDTCMAT FT LLVGDLETQVCLMPGRGFIGVNHFLRTLRAGIMVKLVGVSTSTWFSWNPAHLKTFEGNE FT LALYTSDLLPKSVESLRDRIVFDAELLPEKFKAIMFSYKRDPLTGGMLPEIGSLVCEKK FT NRSFVVQFGEYSRKVPTHIEYKSPTVKGDCGSLILTEIKGKFCLAGIHVAGNSVSGSSC FT FIPSDDSFFVKEGQSDFSLAYTEWAQPKILGPGCKAIGILNKEHQVSTGGSTSFVEVPV FT EWHLDTPFSKLPSVLKRGDPRLAGTENANYDPFSVSMSKYAQEAGPFDNICLQKVAYDI FT SEEWIDASAEFDFDEVSMDVALNGLENVEYFDSLVLSTSEGFPYRLDRKPGDKGKCRYV FT TGEPGNLRIEDERILKDIEWFEDVSAERVPDLYCIECVKDERLPIRKVLEKPKSRTFSV FT LPMSYNIVVRKKFLKFVKFIMDKRDIFPCQVGINPYSREWTRLATTLLEKGNSILCCDY FT SRFDGFLPKCVMEQIAEAINRLCGGSKRLQTQRKNLMLACCSRTALCEKLVYRVENGIP FT SGFPLTVIVNSILNEILIRSAYMECFKDNREIQMNFNTYVKMVTYGDDNLISVAASIKT FT KFCGEFLQRFMAARGITITDGVDKTSEFLNFRELTECDFLKRSFKENFDGTWRAPMDRT FT SLWPQLHFVKAKDIELVEAYISNLNNVLRELYLHSPEEAICLRRKALANLSWLKAKDLL FT TIGQIADFHMSQQNGEMNFIKASHAMENLDLIDPLIPGELPMKMREILPNIFVVAEHCI FT PGDLKDYFTVSLVTNRRFDNADEGVVIQYPMGFGRGGLPTQQFMRENIMRKGSHLNKLL FT KKQLDGGRKMLFVSQSSIVPAYVFCVLFLHSVKSIPLLSVNAALTCAISVCKRLNYLTR FT DFEDCFITSK" FT 3'UTR 5784..5870 XX SQ Sequence 5870 BP; 1638 A; 1013 C; 1414 G; 1805 T; 0 other; tttaagaaat taaacaacag ctttcgtacc gaatacagct ttcgtgtttt aaaagctttc 60 atttctggcg tttggcaaga atttgattgc tctcaaaaca gctttcgttc ccaaaacagc 120 tttcgttcaa acagctttcg ttcctaaaac agctttcgtt cctcaagctt tcttttctgg 180 cgtttggcaa gaatttgatt gcttacaaga cagctttctt tggatttcac acagctttcg 240 ccaagccctt agttcatcac tctgttgtgt cttttctccg ttcatttaaa tcacttttat 300 cgtaaatgga tttcgaaact tcacaacgtt tgacaggttt cttgaaaact tcttttcact 360 tgagctcttt gcagcaatta gtggaacagg agtacaaagg accttctgct actgaggtta 420 agatacatct gtgtatctat catgccaatc tgatggcgga tgatatgaat tctggcttat 480 ctgattgcca aattcatcaa gctcagtaca taacacgtcg ctttcgtact gtaagatctt 540 tctttcgaga aatgattgtc actgagaagg tttctctagc atggatggca gagtataata 600 acacgacctt ctctaattgg tttggttatg ctatagtgcc cgtggagcca caaatttcag 660 cagatgcaaa gtttggccaa ggtattcttg agtatgctca agctctcccg aagtttctgt 720 tttccaaggc agcaggagcg ctgacgagca cattcaagct tatcctaaat tgtctgaaag 780 atgcattgca tcaatgtttt ggcagttgga ttccgtattt gcaacagtcc tttggatggt 840 ttgcaaatgt atttgaaaca ttgcaaggat gggctgaagc agtgcataac aagataggtg 900 gcattcttgg tggaatggag gagtgcttgt acattggtat gggattgaca gcctctacgt 960 gcatagtggc tctcttggaa agatttctgg ttgcgacagg attactaaag aagcctttgg 1020 gagctccaat gctttttgtc actgtagctg ttggtgcaat atgcgccttt agcgggggag 1080 ctaaaatgat ggaaggagtt attatagatt tacttatgtt tgttaagatt tcttgttctc 1140 aattactttc agtacttttt agtttttcag cagaagaggc agctgagggc cagtttagta 1200 gcaccaccgt gttagaaaat ttggcagctt tggttagcaa ctggtcaagt acgagcattc 1260 aagacattgg acgtggtttt gcggccatca ctcagattaa gaccggaatt ttatctatga 1320 gagatatgat agtgtttatt tttgagaaat tgagcggtgc ggcacacaaa ttgcttggaa 1380 tcgaatcaca agtcttggca gacttatcct tgctacttgg ggaaaacgtg gtagactggc 1440 tcgccgagtg tgatgctatg gttcaatata tgttggaatt caagagcagt gccagagata 1500 tttttgatag gctatcccag ttgatagaaa aagggcgcat gatgcgcaca ggaattatca 1560 aaatgaacca tagaggttct tcccaggtgc ttaatctgat ttcaaaagcc ctggaaaagc 1620 ttgttgagct tcattcctcg atggttatct caggtgccaa cactgcccga aaggcacctt 1680 ttatggtttt cttgactgga agttcaggat gcgggaaaac ttctgttgcc cagcgcattg 1740 gcgctaattg gttgcaggct gaaggattag gcactgcgga gctttattcc agaaatggtc 1800 ttgacccttt ttggtctggt tataagaggc aggcagtggt gatgtatgat gactttggtg 1860 caattcctgg aactgtatca aatgaagcag agatcataca tgtggtttca aggaatcctt 1920 atgcaaccat tatgccaggt ctggctgaga aaggtatgta ttttgattca agattgttgc 1980 tagctactag caattttttg gcggccaaca gcgagtctgg tgtgcatgat tcacatgcat 2040 acgaaagaag gcgtcacgtg gttgtgagag tggttttgaa agagggggtt ccatataatg 2100 cagactttcc aacagaaaat caaaaatacc aaatcttgga atcagtggaa ccgtttaggt 2160 ttgtgcgaga atttgaagat tacgaagatt tgtggtccta catttatgac agatataaga 2220 cccatgatga acaggaagca tcattcttaa attctttgcc agttcctgat gcagatgaaa 2280 ctgaagcact tgaagcttta gtttctcttt ccgcaatgct gggcagtttt gctcctaaaa 2340 atgtcattaa atatgctaca gagaatctcc cgggttatca ctatcttgtg caagacggga 2400 atgtggtgta tttttggcat caaaatggtg acattgaaat agttccaata agcaaaatgc 2460 atttaggggc aagtgaagtg tcacaattga agcaggacag cttgaatagc gcacttagat 2520 accaaaattt ggcgaagaat tttccttctt tgaatcctct tgcagttttg tatgcgtcaa 2580 acatcgtcac aaagaaatgg attgggcaag acttgaaagc aacgagcgac tgcaaagatg 2640 aatttatggt gtcgcaaatt aatgagttgc ccacgtggca gagagcttac ttgtatgttt 2700 taagtaagca tttggctaat gcaaaggcag gcggatggtt ttctaattta cttgatgaaa 2760 cgaagaaagc tatgcgacaa ctttacgcca aagaatataa aagttggcct atggctttaa 2820 aacttgctgt gggaagcatg ctggcagtag ttgtttgtgg aagtgtctat gcggttttga 2880 gcatgctgtg gagtatggga actggtgcag ctttcttttc aggtgcggct gcagttttta 2940 ctgcgcagac agttgaaggg caaagtgaca ttccaaacaa aaatgagagt gagtacttgt 3000 ttcgaaataa acgagtgcga gttagaaatt gggatgccca agcagcatgt tacggtgatt 3060 ctgcacaatg gatgatggac acatgcatgg caactctttt ggtcggagat ttggaaacgc 3120 aggtgtgtct gatgccaggg aggggtttca taggagtaaa tcacttcttg agaacgttgc 3180 gtgctggcat tatggtaaaa cttgttggag ttagcacaag cacatggttc tcctggaatc 3240 ctgcacactt gaaaactttt gaaggaaatg aattggctct ttatacttct gatttgttac 3300 ccaagagcgt agagtctctt cgagatcgca ttgtctttga tgcagagcta ttgccggaaa 3360 aatttaaggc catcatgttt tcttacaagc gtgatccgct cactggggga atgcttccag 3420 aaattggctc attggtgtgt gagaagaaaa acaggagctt tgtggtacaa tttggtgaat 3480 attccagaaa agtcccaaca cacattgaat ataagagccc gacggtaaaa ggagattgtg 3540 gatccctgat tctcactgaa attaaaggaa aattttgttt ggctggtata cacgtggcag 3600 gaaattctgt tagtgggtcc tcatgcttta ttccttcaga tgattctttt tttgtgaaag 3660 agggccaatc tgatttttcc ttggcttaca ctgagtgggc acaacccaag atcttgggtc 3720 ctgggtgcaa agcgataggt attttgaaca aggagcacca ggtaagcacg gggggctcta 3780 caagttttgt ggaagttcca gtagagtggc atctcgacac tcctttttca aagttgccaa 3840 gtgtcctgaa acgaggtgat ccacggctgg ctggcacaga aaatgcgaat tatgatccat 3900 tttctgtgag catgagcaag tatgcccaag aggcagggcc ttttgataac atatgtctcc 3960 aaaaagtagc atatgacatt tcagaggagt ggatagatgc aagtgcagaa tttgattttg 4020 acgaagtgtc catggatgtg gctctgaatg gccttgagaa tgttgaatat ttcgattctt 4080 tggtgctcag cacatccgaa ggttttccct acaggttaga caggaaacca ggagataaag 4140 gaaaatgtcg ttatgtgact ggtgagcctg gtaacttgcg cattgaagat gagcgcatct 4200 tgaaagatat tgaatggttt gaggatgtct cagcggaaag ggttcctgac ttgtattgca 4260 tagaatgtgt taaggatgag aggttgccaa tacggaaagt gcttgaaaaa cccaaaagtc 4320 gcacattttc tgtactaccg atgtcctata acattgtggt cagaaaaaag tttttgaagt 4380 ttgtgaagtt tatcatggat aaacgtgaca ttttcccttg tcaggttggc ataaatccat 4440 attcccgaga atggactcgt cttgcaacga cattgcttga gaaaggaaat tcaattttat 4500 gttgtgatta cagtcgattt gatggatttt tgcctaagtg tgtcatggaa caaattgcag 4560 aggccatcaa cagattgtgt ggaggaagca agcggttaca aactcaaagg aaaaacttga 4620 tgttggcatg ttgtagccgt acggctcttt gtgagaagtt ggtttatcgc gttgaaaatg 4680 gaataccatc tgggtttcca ttgactgtca ttgtgaactc catactaaat gaaattttga 4740 ttcgtagcgc ttacatggag tgcttcaagg ataatcgtga aatacagatg aattttaaca 4800 cttatgttaa aatggtcact tatggagatg ataatctgat atctgttgct gccagcataa 4860 agacaaagtt ctgtggggag tttttgcaga ggtttatggc tgcacgagga attaccataa 4920 cagatggcgt tgacaaaact agtgagttcc ttaactttag ggaattaact gagtgtgatt 4980 ttctcaaacg ttctttcaaa gaaaattttg atggaacatg gagagcgcca atggacagga 5040 caagtttgtg gccacaattg cattttgtga aggctaaaga catagaattg gtggaagctt 5100 atataagcaa cttgaacaat gtgttaaggg agttgtattt acattctccg gaagaggcta 5160 tttgccttag aaggaaagcc cttgctaatc tgagttggct taaagcaaaa gatttgctga 5220 ctattgggca gattgcagat ttccatatga gtcagcaaaa tggggaaatg aactttatta 5280 aagcttcgca tgctatggaa aatctggatt taattgatcc tttgatacca ggtgaattgc 5340 caatgaagat gcgtgaaatt cttccaaata tttttgttgt agctgaacat tgcatacctg 5400 gtgacttgaa ggactacttc actgtctctt tggtcacaaa tcgcagattt gataatgcag 5460 atgaaggagt cgtcatccaa tatccaatgg ggtttggtag aggtggactt ccgacacaac 5520 aatttatgcg agaaaatata atgcgcaaag gaagtcattt aaataagctt ctcaagaagc 5580 aactggatgg tggcaggaag atgctgtttg tgtctcagag tagtatagtg ccagcttacg 5640 tgttttgtgt gctttttctg cattctgtta aaagcattcc cctgctttct gtgaatgctg 5700 ctctgacgtg tgctatttct gtttgcaagc gcttaaatta cctcacaaga gattttgagg 5760 attgttttat cacctcaaag tgaattatgt tttagcaact attgtgtgat tttattttaa 5820 aaatcaagat tgaatctatc tacttttcca gtttaagatt ctagttgtgc 5870 //