Dbfetch

Dbfetch

ID   EU871550; SV 1; linear; genomic RNA; STD; VRL; 606 BP.
XX
AC   EU871550;
XX
DT   08-JUL-2009 (Rel. 101, Created)
DT   13-JUL-2009 (Rel. 101, Last updated, Version 2)
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DE   Cotton leafroll dwarf virus isolate CLRDV-CV2 coat protein (CP) and
DE   movement protein (MP) genes, complete cds.
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KW   .
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OS   Cotton leafroll dwarf virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-606
RX   PUBMED; 18937850.
RA   Silva T.F., Correa R.L., Castilho Y., Silvie P., Belot J.L., Vaslin M.F.;
RT   "Widespread distribution and a new recombinant species of Brazilian virus
RT   associated with cotton blue disease";
RL   Virol J 5:123-123(2008).
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RN   [2]
RP   1-606
RA   Silva T.F., Correa R.L., Castilho Y.G., Vaslin M.F.S.;
RT   ;
RL   Submitted (04-JUL-2008) to the INSDC.
RL   Departamento de Virologia, Instituto de Microbiologia, Universidade Federal
RL   do Rio de Janeiro (UFRJ), Avenida Pau Brasil s/n CCS I014, Rio de Janeiro,
RL   RJ 21941-971, Brazil
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DR   MD5; fecc8a022fed9b58fb84d7171d36d6a2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..606
FT                   /organism="Cotton leafroll dwarf virus"
FT                   /host="Gossypium hirsutum"
FT                   /isolate="CLRDV-CV2"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Campo Verde, MT"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:312295"
FT   gene            1..606
FT                   /gene="CP"
FT   CDS             1..606
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C6FDS4"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:C6FDS4"
FT                   /protein_id="ACN50333.1"
FT                   /translation="MNTVVGRRTINGRRRPRRRNRRRQNKPVVVVQTPRNTQRRRRRRR
FT                   GGRNRTGGRIPGGPGASSETFVFSKDNLSGSSSGSITFGPSLSDCPAFSNGMLKAYHEY
FT                   KISMVLLEFISEASSTSSGSISYEVDPHCKLSTLSSTINKFGITKNGRKQFAASFINGQ
FT                   EWHDTSEDQFRILYKGNGSSSIAGSFRVTIRCQFHNPK"
FT   gene            32..556
FT                   /gene="MP"
FT   CDS             32..556
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:C6FDS5"
FT                   /protein_id="ACN50334.1"
FT                   /translation="MEEDDHVDATGVGKISQWLWSKPLGTHNAEDDEDEEVVIGQEDAF
FT                   LEDQELRARHLFSQKTISREVPQDQSRSGRLYQIARHSAMECSRPTMNIRSQWSYWSSS
FT                   PRPLQHPPVPSLTKWIHTVNCLPSPPLLINSESPRTGGSNLRRLLSTDRNGMTPPRTSS
FT                   ESYTKAMVPRR"
XX
SQ   Sequence 606 BP; 177 A; 148 C; 144 G; 137 T; 0 other;
     atgaatacgg tcgtgggtag aagaacgatc aatggaagaa gacgaccacg tagacgcaac        60
     aggcgtcggc aaaataagcc agtggttgtg gtccaaaccc ctcggaacac acaacgcaga       120
     agacgacgaa gacgaggagg tcgtaatagg acaggaggac gcattcctgg aggaccagga       180
     gcttcgagcg agacatttgt tttctcaaaa gacaatctct cgggaagttc ctcaggatca       240
     atcacgttcg ggccgtcttt atcagattgc ccggcattca gcaatggaat gctcaaggcc       300
     taccatgaat ataagatctc aatggtctta ttggagttca tctccgaggc ctcttcaaca       360
     tcctccggtt ccatctctta cgaagtggat ccacactgta aattgtctac cctctcctcc       420
     actattaata aattcggaat caccaagaac gggaggaagc aatttgcggc gtcttttatc       480
     aacggacagg aatggcatga cacctccgag gaccagttca gaatcttata caaaggcaat       540
     ggttcctcgt cgatagctgg ctcttttagg gtcacaattc ggtgccaatt ccacaatcca       600
     aaatag                                                                  606
//