Dbfetch

Dbfetch

ID   EU871545; SV 1; linear; genomic RNA; STD; VRL; 606 BP.
XX
AC   EU871545;
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DT   08-JUL-2009 (Rel. 101, Created)
DT   13-JUL-2009 (Rel. 101, Last updated, Version 2)
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DE   Cotton leafroll dwarf virus isolate CLRDV-PL3 coat protein (CP) and
DE   movement protein (MP) genes, complete cds.
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KW   .
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OS   Cotton leafroll dwarf virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-606
RX   PUBMED; 18937850.
RA   Silva T.F., Correa R.L., Castilho Y., Silvie P., Belot J.L., Vaslin M.F.;
RT   "Widespread distribution and a new recombinant species of Brazilian virus
RT   associated with cotton blue disease";
RL   Virol J 5:123-123(2008).
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RN   [2]
RP   1-606
RA   Silva T.F., Correa R.L., Castilho Y.G., Vaslin M.F.S.;
RT   ;
RL   Submitted (04-JUL-2008) to the INSDC.
RL   Departamento de Virologia, Instituto de Microbiologia, Universidade Federal
RL   do Rio de Janeiro (UFRJ), Avenida Pau Brasil s/n CCS I014, Rio de Janeiro,
RL   RJ 21941-971, Brazil
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DR   MD5; da90eb0baea71f28ef70edf802ce1177.
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FH   Key             Location/Qualifiers
FH
FT   source          1..606
FT                   /organism="Cotton leafroll dwarf virus"
FT                   /host="Gossypium hirsutum"
FT                   /isolate="CLRDV-PL3"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Primavera do Leste, MT"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:312295"
FT   gene            1..606
FT                   /gene="CP"
FT   CDS             1..606
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C6FDR4"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:C6FDR4"
FT                   /protein_id="ACN50323.1"
FT                   /translation="MNTVVGRRTINGRRRPRRRNRRRQNKPVVVVQAPRNTQRRRRRRR
FT                   GGRNRTGGRVPGGSGASSETFVFSKDSLAGSSSGSITFGPSLSDCPAFSNGMLKAYHEY
FT                   KISMVLLEFISEASSTSSGSISYEVDPHCKLSTLSSTINKFGITKNGRKQFAASFINGQ
FT                   EWHDTSEDQFRILYKGNGSSSIAGSFRVTIRCQFHNPK"
FT   gene            32..556
FT                   /gene="MP"
FT   CDS             32..556
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:C6FDR5"
FT                   /protein_id="ACN50324.1"
FT                   /translation="MEEDDHVDATGVGKISQWLWSKPLGTHNAEDDEDEEVVIGQEDAF
FT                   LEDQELRARHLFSQKTVSREVPQDQSRSGRLYQIARHSAMECSRPTMNIRSQWSYWSSS
FT                   PRPLQHPPVPSLTKWIHTVNCQPYPPRLTNSESPRMGGNSLQRLSLTDRNGMTPPRTSS
FT                   ESYTKAMVPRR"
XX
SQ   Sequence 606 BP; 177 A; 146 C; 148 G; 135 T; 0 other;
     atgaatacgg tcgtgggtag aagaacgatc aatggaagaa gacgaccacg tagacgcaac        60
     aggcgtcggc aaaataagcc agtggttgtg gtccaagccc ctcggaacac acaacgcaga       120
     agacgacgaa gacgaggagg tcgtaatagg acaggaggac gcgttcctgg aggatcagga       180
     gcttcgagcg agacatttgt tttctcaaaa gacagtctcg cgggaagttc ctcaggatca       240
     atcacgttcg ggccgtcttt atcagattgc ccggcattca gcaatggaat gctcaaggcc       300
     taccatgaat ataagatctc aatggtctta ttggagttca tctccgaggc ctcttcaaca       360
     tcctccggtt ccatctctta cgaagtggat ccacactgta aattgtcaac cctatcctcc       420
     acgattaaca aattcggaat caccaagaat gggaggaaac agtttgcagc gtctttcatt       480
     aacggacagg aatggcatga cacctccgag gaccagttca gaatcttata caaaggcaat       540
     ggttcctcgt cgatagctgg ctcttttagg gtcacaattc ggtgccaatt ccacaatcca       600
     aaatag                                                                  606
//