ID EU856364; SV 2; circular; genomic DNA; STD; VRL; 2829 BP. XX AC EU856364; XX DT 18-JUN-2009 (Rel. 101, Created) DT 18-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Sweet potato leaf curl virus-Spain isolate ES:CI:BG12:02, complete genome. XX KW . XX OS Sweet potato leaf curl virus-Spain OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2829 RX DOI; 10.1099/vir.0.012542-0. RX PUBMED; 19515824. RA Lozano G., Trenado H.P., Valverde R.A., Navas-Castillo J.; RT "Novel begomovirus species of recombinant nature in sweet potato (Ipomoea RT batatas) and Ipomoea indica: taxonomic and phylogenetic implications"; RL J. Gen. Virol. 90(Pt 10):2550-2562(2009). XX RN [2] RP 1-2829 RA Lozano G., Pinar-Trenado H., Navas-Castillo J.; RT ; RL Submitted (27-JUN-2008) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL Algarrobo-Costa, Malaga 29760, Spain XX RN [3] RC Sequence update by submitter RP 1-2829 RA Trenado H.P., Lozano G., Navas-Castillo J.; RT ; RL Submitted (16-JUN-2009) to the INSDC. RL Virology, CSIC, Estacion Experimental La Mayora, Algarrobo-Costa, Malaga RL 29760, Spain XX DR MD5; 8dc77bc91690161e561e0bed0452637c. XX CC On Jun 17, 2009 this sequence version replaced gi:223047830. XX FH Key Location/Qualifiers FH FT source 1..2829 FT /organism="Sweet potato leaf curl virus-Spain" FT /host="Ipomoea batatas" FT /isolate="ES:CI:BG12:02" FT /mol_type="genomic DNA" FT /country="Spain" FT /db_xref="taxon:652719" FT gene 99..470 FT /gene="V2" FT CDS 99..470 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:C5H6W0" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:C5H6W0" FT /protein_id="ACS44337.1" FT /translation="MLFQSWCPSMADLWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYE FT PGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT gene 295..1059 FT /gene="V1" FT CDS 295..1059 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:C5H6W1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C5H6W1" FT /protein_id="ACS44338.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKIDHTNIITYWLIRDRRPNKDPLNFVQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHAINPVYQTLRCRAYFYDSHNN" FT gene complement(1084..1509) FT /gene="C3" FT CDS complement(1084..1509) FT /codon_start=1 FT /gene="C3" FT /product="REn" FT /note="replication enhancer protein" FT /db_xref="GOA:C5H6V6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5H6V6" FT /protein_id="ACM79921.1" FT /translation="MDSRTGESLSRAQTMRALEFDTNPMSVGRTAPFYLRVIYVHQSAQ FT GRTIIKFQMRVNYRERIALGFHKIFLQFRIVTTRLTGAFHSWTGILERLKWRICNELAN FT IGFFSLINLVYVIRHLPESVRWIEEVDTIDCNDDVKA" FT gene complement(1226..1672) FT /gene="C2" FT CDS complement(1226..1672) FT /codon_start=1 FT /gene="C2" FT /product="TrAP" FT /note="transcriptional activator protein" FT /db_xref="GOA:C5H6V7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C5H6V7" FT /protein_id="ACM79922.1" FT /translation="MSNLPSGIKRKCPIQEPLHAEAKKAKRKAPETRTRIVWKGCGCSA FT FITQTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTILPESNLRPPECTGENNH FT QIPDEGQLQGENSSGIPQNIPAIQDSDDPANWCFSQLDWYFGTP" FT gene complement(1581..2675) FT /gene="C1" FT CDS complement(1581..2675) FT /codon_start=1 FT /gene="C1" FT /product="Rep" FT /note="replication-associated protein" FT /db_xref="GOA:C5H6V8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C5H6V8" FT /protein_id="ACM79923.1" FT /translation="MAPPKRFRISSKNYFITYPRCSLSKEDCLSQLLNIQTPTNKKYMH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYV FT DKDGDTITWGEFQVDGGSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVSHSGATARRGEEGQEESS" FT gene complement(2261..2518) FT /gene="C4" FT CDS complement(2261..2518) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5H6V9" FT /protein_id="ACM79924.1" FT /translation="MGNLTSMCLCSSKVNSSAQIADSSTLCHPQGRLTFTPTSRELNHR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLMTQPQRP" XX SQ Sequence 2829 BP; 732 A; 603 C; 674 G; 820 T; 0 other; accggtgccc gccgcgccct tttaaagtgg gccccacatt ggggaccacg cgtcttttct 60 gttcttactt taatgatgac attgctttat aaggaccaat gctgttccag tcttggtgcc 120 caagtatggc tgatttgtgg gacccacttc agaacccgct cccagatact ttatacggtt 180 ttaggtgtat gctttctgta aaatacctgc aaggtatttt gaagaaatac gagccaggaa 240 ccttagggtt tgagctctgt tcggaattaa tccgtatatt cagggtcagg cagtatgaca 300 gggcgaattc ccgtttcgcg gagatttcat ccctatgggg ggagaccggt aagacggagg 360 ctgaacttcg agacagctat cgtgccttac actgggaatg ctgtcccaat tgctgcccga 420 agctatgtcc cggtttcaag aggcgtccgg atgaagagaa agaggggtga ccgcatcccg 480 aagggttgtg tgggtccctg taaggtccag gactatgagt tcaagatgga cgttccccac 540 acgggaacgt ttgtctgtgt ctcggatttt acaaggggga ctgggcttac ccatcgcctg 600 ggtaagcgtg tttgtgttaa gtcaatgggt atagatggga aggtctggat ggatgacaat 660 gtggccaaga tagatcacac caatatcatc acgtattggt tgatccgtga cagaaggccc 720 aataaggatc cgcttaattt tgttcaggtt ttcaccatgt acgacaacga gccaactact 780 gctaagatcc gaatggatct gagggataga atgcaggtct tgaagaagtt ctctgttaca 840 gtttcaggag gcccctacag ccacaaggaa caggctttgg ttagaaagtt ttttaagggt 900 ttgtataatc atgtaactta caatcacaag gaagaagcta aatacgagaa tcacttagag 960 aatgccctta tgctgtatag tgctagtagt catgctatta atcctgtgta tcagaccctg 1020 cgttgcaggg cttatttcta tgattcacac aataattaat aaaattttat tttattaata 1080 cagttatgct tttacatcat cattacaatc tatagtatct acttcttcta tccatctaac 1140 tgattcaggc agatgcctga ttacataaac taaattaata agagaaaaaa aacctatatt 1200 agctaattca ttacagatac gccatttaag gcgttccaaa ataccagtcc aactgtgaaa 1260 agcaccagtt agccgggtcg tcactatcct gaattgcagg aatattttgt ggaatcccag 1320 agctattctc tccctgtagt tgaccctcat ctggaatttg atgattgttc tcccctgtgc 1380 actctggtgg acgtagatta ctctcaggta gaatggtgca gtccgaccca cagacatggg 1440 gttggtgtcg aattctagtg ctctcatagt ctgagcacga cttagtgatt cccctgtgcg 1500 tgaatccatg ctggtacttg caggtttggg tgatgaaggc tgagcagccg cagcccttcc 1560 acactatcct tgtccttgtt tcaggagctt tcctcttggc cttcttcgcc tctgcgtgca 1620 gtggctcctg aatgggacac ttcctcttga ttccagaagg gagattggac atcgcagaat 1680 atagcgtttg ctgttgccca attcttgagt gctccttgct ctggtttgtc caaccagagt 1740 ttaaatgaag agccctctcc tggattgcag aggaagatag tgggaattcc gcctttaatt 1800 tgaactggct tcccgtactt acagttggat tgccagtcct tctgggcccc catgaattcc 1860 ttaaagtgct ttaggtattg ggggttgacg tcatcaatga cgttatacca agcactgttg 1920 ctataaactt tagggcttag atctaaatgc ccacacaaat aattgtgagg gcccaaagat 1980 ctggcccata ctgttttgcc tattctgctt gggccttcaa taacaatgga tatgggtcta 2040 tccggccgcg cagcggaatc catgacattt tcagcggccc agtcgctgat aatgtcagga 2100 acggcattga aagaagaaga agaaaaaggt gaagaatata cagaaggtgg aggagaaaaa 2160 atcctatcta aattagaaac taaattatga aactgaaata aatatttttc agggagtttc 2220 tccctaatta tttgcaacgc agcttcttta gaacctgcgt ttagggcctc tgcggctgcg 2280 tcattagcag tctgctgacc tcctctagca gatccgccgt cgacctggaa ttcaccccag 2340 gtgatggtat ccccgtcctt atcaacgtag gacttgacat cggacgatga tttagctccc 2400 tggatgttgg ggtgaaagtg agccgacctt gtgggtgaca caaggtcgaa gaatctgcta 2460 tttgtgcaga cgaatttacc ttcgaactgc acaagcacat ggaggtgagg ttccccatcc 2520 tcgtgcagtt ctttggctat gtgcatgtat tttttatttg tgggggtttg gatgttaagt 2580 agttgggaga ggcagtcctc tttagagagc gaacatcgtg gataagtaat aaaatagttt 2640 tttgaagaaa ttctaaaacg tttgggcgga gccatttggt gacactcaga ctttcaaatg 2700 aattggtgac tggtgacaat ttatactatg tcaccaaatg gcatttctgt aatttagaag 2760 atccttttag ctttaattca aattccgaca actctggctc caccaaaagg cgggcaccgt 2820 attaatatt 2829 //