ID   EU852919; SV 1; linear; genomic RNA; STD; VRL; 1817 BP.
XX
AC   EU852919;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   28-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Pelargonium line pattern virus isolate SPA7 clone 1 putative movement
DE   protein (p7), putative movement protein (p9), and coat protein (CP) genes,
DE   complete cds.
XX
KW   .
XX
OS   Pelargonium line pattern virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Pelarspovirus.
XX
RN   [1]
RP   1-1817
RX   DOI; 10.1016/j.virusres.2010.10.022.
RX   PUBMED; 20979982.
RA   Castano A., Ruiz L., Elena S.F., Hernandez C.;
RT   "Population differentiation and selective constraints in Pelargonium line
RT   pattern virus";
RL   Virus Res. 155(1):274-282(2011).
XX
RN   [2]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   "Sequence variability of distinct isolates of Pelargonium line pattern
RT   virus";
RL   Unpublished.
XX
RN   [3]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   ;
RL   Submitted (26-JUN-2008) to the INSDC.
RL   Instituto de Biologia Molecular y Celular de Plantas, Ingeniero Fausto Elio
RL   s/n, Valencia, Valencia 46022, Spain
XX
DR   MD5; 7000dff238cbaea919d8bd28b5a717ce.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1817
FT                   /organism="Pelargonium line pattern virus"
FT                   /host="Pelargonium zonale"
FT                   /lab_host="Chenopodium quinoa"
FT                   /isolate="SPA7"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /clone="1"
FT                   /db_xref="taxon:167019"
FT   gene            208..399
FT                   /gene="p7"
FT   CDS             208..399
FT                   /codon_start=1
FT                   /gene="p7"
FT                   /product="putative movement protein"
FT                   /db_xref="GOA:C6F3J9"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3J9"
FT                   /protein_id="ACJ38457.1"
FT                   /translation="MDIQPKDTNLSVKEAGKSAKRGSTKNKLDIAHSGVSKGTSRDLVG
FT                   ANFVTVADKVEFVVHLHF"
FT   gene            305..571
FT                   /gene="p9"
FT   CDS             305..571
FT                   /codon_start=1
FT                   /transl_except=(pos:305..307,aa:Met)
FT                   /gene="p9"
FT                   /product="putative movement protein"
FT                   /note="non-canonical start codon"
FT                   /db_xref="GOA:C6F3L5"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3L5"
FT                   /protein_id="ACJ38458.1"
FT                   /translation="MEYPRVHLAILSVLILSQLLIKWNLWSISIFSCLPQPHLLHPNLL
FT                   VCIVLCIFFSSVLSQGQSYSYSYFSTSTSDKFISVAVGNGGQG"
FT   gene            555..1571
FT                   /gene="CP"
FT   CDS             555..1571
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C6F3L6"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3L6"
FT                   /protein_id="ACJ38459.1"
FT                   /translation="MAAKDNPAVLAAVARREQWAIKLQSKGWGSLSKAQKATARSYGIG
FT                   NPPTVVVPRTTRLVAGNPMNARRARGEPGNAKMGTTITKQEYMGELHSSSKIETYLLDP
FT                   KNVRSFPQLSGLAIGYNKYKITDFKVRYSPKCSDSECGLTIAYSSDSSDPPPKNKFNLF
FT                   SMNNKYETAAHKPLLVTLPVSKETRFLRDKCTDDSKLVDSGAVHVLVDGNHEGRLGELF
FT                   FELTIVFSEPTFCNHHSQVIKGLKESEGPEYVKIEPDKGTVKLVFQAAGAYLISIVASK
FT                   LERIGQLGASEGDKLVVESADKSACLCRIEAEQPGSAIVLVYASREAITLRAYINKL"
XX
SQ   Sequence 1817 BP; 483 A; 447 C; 470 G; 417 T; 0 other;
     gaaaatggcc ttctacgggg actactattg gaagtgggtc aaccagcata acggcaagta        60
     tgaaccggtg actgaggaag ctcggcactc attccacttg gcgtttgggg tcagccctga       120
     ccaacagttg gccttagagg ctatatactc tcgcaagtcg ctactttggg agtcctcccc       180
     ctttacattt gaagttggcg ctatcgaatg gatattcaac caaaagatac caatctaagt       240
     gtaaaggagg cagggaaatc agcaaagcgc ggaagcacaa agaacaagct agacatagct       300
     cacagtggag tatccaaggg tacatctcgc gatcttgtcg gtgctaattt tgtcacagtt       360
     gctgataaag tggaatttgt ggtccatctc catttttagt tgtttaccac agccacactt       420
     gttgcaccct aatctacttg tctgcatcgt gttgtgcatc ttctttagtt cagttcttag       480
     ccagggtcag agttatagtt atagttactt ttcaactagc accagtgata aattcatctc       540
     agtagctgta ggaaatggcg gccaaggata atccggcagt cctcgcagcc gtggcgaggc       600
     gggaacaatg ggcaatcaag cttcaatcca agggttgggg ctccctgtcc aaggcccaaa       660
     aagccaccgc acgctcgtac gggataggga accccccgac agtcgtggtg cctcgcacta       720
     ctcggctggt ggcggggaac cccatgaacg cgcggcgggc gcggggagag cctgggaatg       780
     ccaaaatggg caccaccata accaagcaag aatacatggg cgagcttcat tcttcttcaa       840
     agattgaaac ttacttgctc gaccccaaga atgtgaggag cttccctcag ttaagcgggc       900
     ttgcaatcgg ctacaacaag tacaagatca ctgacttcaa agtgcggtac agtcccaagt       960
     gtagcgacag cgagtgtggg ttaaccatag cctactctag cgactcttca gacccaccgc      1020
     caaagaacaa atttaacttg tttagcatga acaacaagta cgaaacagcc gcgcacaagc      1080
     cactcctagt aacacttccc gtgtctaaag agaccagatt cttgcgggat aagtgtactg      1140
     atgattccaa gctcgtagac agtggggcgg tgcatgtcct ggtggacggg aatcacgaag      1200
     gcaggctcgg agaactcttc ttcgagttga ccatcgtgtt ttctgaacca accttttgca      1260
     atcaccactc ccaagtcatc aaaggactca aagagagtga agggcccgaa tatgtcaaaa      1320
     ttgagcctga caaggggacc gtgaaactgg ttttccaggc agcgggggcg tacttaattt      1380
     ctatagtggc ctccaaatta gagcgaatcg ggcagcttgg tgcttctgaa ggtgacaagc      1440
     tggtagttga aagtgctgat aagagtgcct gcctctgtag aatagaggcg gagcaacccg      1500
     gtagtgctat agtattagtt tatgccagca gggaggccat taccctgcga gcttacatca      1560
     acaagctatg aggaaagcca ctgcggtggg gtcagtctcc tggtgcgcca acacccagaa      1620
     ggggagacaa cttcagtggt tcttaaccca atgcttagag taagcctaga aaaacccaaa      1680
     aacagagtgc tactgctttc agtgtgcgag ctttatttgc tcacttcctc cgtcgataaa      1740
     atcccgactt gtcgggtggg cttcggcgga catccttaat gaagaacggg ggggtaaccc      1800
     acccccctga tctgccc                                                     1817
//