ID   EU852916; SV 1; linear; genomic RNA; STD; VRL; 1817 BP.
XX
AC   EU852916;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   28-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Pelargonium line pattern virus isolate SPA3 clone 1 putative movement
DE   protein (p7), putative movement protein (p9), and coat protein (CP) genes,
DE   complete cds.
XX
KW   .
XX
OS   Pelargonium line pattern virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Pelarspovirus.
XX
RN   [1]
RP   1-1817
RX   DOI; 10.1016/j.virusres.2010.10.022.
RX   PUBMED; 20979982.
RA   Castano A., Ruiz L., Elena S.F., Hernandez C.;
RT   "Population differentiation and selective constraints in Pelargonium line
RT   pattern virus";
RL   Virus Res. 155(1):274-282(2011).
XX
RN   [2]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   "Sequence variability of distinct isolates of Pelargonium line pattern
RT   virus";
RL   Unpublished.
XX
RN   [3]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   ;
RL   Submitted (26-JUN-2008) to the INSDC.
RL   Instituto de Biologia Molecular y Celular de Plantas, Ingeniero Fausto Elio
RL   s/n, Valencia, Valencia 46022, Spain
XX
DR   MD5; a63d1754622c61da36d880fa411e61df.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1817
FT                   /organism="Pelargonium line pattern virus"
FT                   /host="Pelargonium zonale"
FT                   /lab_host="Chenopodium quinoa"
FT                   /isolate="SPA3"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /clone="1"
FT                   /db_xref="taxon:167019"
FT   gene            208..399
FT                   /gene="p7"
FT   CDS             208..399
FT                   /codon_start=1
FT                   /gene="p7"
FT                   /product="putative movement protein"
FT                   /db_xref="GOA:C6F3K5"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3K5"
FT                   /protein_id="ACJ38448.1"
FT                   /translation="MDIQPKDTNLSVKEIGKSAKRGSTKNKLDIAHSGVSKGTSRDLVG
FT                   ANFVTVADKVEFVVHLNF"
FT   gene            305..571
FT                   /gene="p9"
FT   CDS             305..571
FT                   /codon_start=1
FT                   /transl_except=(pos:305..307,aa:Met)
FT                   /gene="p9"
FT                   /product="putative movement protein"
FT                   /note="non-canonical start codon"
FT                   /db_xref="GOA:C6F3K6"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3K6"
FT                   /protein_id="ACJ38449.1"
FT                   /translation="MEYPRVHLVILSVLILSQLLIKWNLWSISISSYLPQPHLLHPNLL
FT                   VCVVLCIFFSSVLSQGQSYSYSYFSTSTSDKFISVAVGNGGQG"
FT   gene            555..1571
FT                   /gene="CP"
FT   CDS             555..1571
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C6F3K7"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3K7"
FT                   /protein_id="ACJ38450.1"
FT                   /translation="MAAKDNPAVLAAVARREQWAIKLQSKGWGSLSKAQKATARSYGIG
FT                   NPPTVVVPRTTRLVAGNPMNARRARGEPGNAKMGTTITKQEYMGELHSSSKIKTYLLDP
FT                   KNVRSFPQLSGLAIGYNKYKITDFKVRYSPKCSDSECGLTIAYSSDSSDPPPKNKFNLF
FT                   SMNHKYETAAHKPLLVTLPVSKETRFLRDKCTDDSKLVDSGAVHVMVDGNHEGRLGELF
FT                   FELTIVLSEPTFCNHHSQVIKGLKESEGPEYVKVEPDKETVKLVFQAAGAYLVSIVASK
FT                   LERIGQLGASEGDKLVVDGADKSACLCRIEAEQPGSAVVLVYASREAITLRAHINKL"
XX
SQ   Sequence 1817 BP; 481 A; 448 C; 472 G; 416 T; 0 other;
     gaaaatggcc ttctacgggg actactattg gaagtgggtg aaccagcata acggcaagta        60
     tgaaccggtg actgaggaag ctcggcactc attccacttg gcgtttgggg tcagccctga       120
     ccaacagttg gccctagagg ccatatactc tcgcaagtcg ctactttggg agtcctcccc       180
     ctttacattt gaagttggcg ctatcgaatg gatattcaac caaaagatac caatctaagt       240
     gtaaaggaga tagggaaatc agcaaagcgc ggaagcacaa agaacaagct agatatagct       300
     cacagtggag tatccaaggg tacatctcgt gatcttgtcg gtgctaattt tgtcacagtt       360
     gctgataaag tggaatttgt ggtccatctc aatttctagt tacttgccac agccacactt       420
     gttgcacccg aacctacttg tctgcgtcgt gttgtgcatt ttcttcagtt cagttcttag       480
     ccagggacag agttatagtt atagttactt ttcaaccagc actagtgata aattcatctc       540
     agtagctgta ggtaatggcg gccaaggata atccggcagt tctcgcagcc gtggcgcggc       600
     gggaacaatg ggcaatcaag ctccaatcca agggttgggg ctccctgtcc aaggcccaga       660
     aagccactgc acgctcgtac ggaataggga accctccaac agtcgtggtg ccacgcacta       720
     cccggctggt ggcagggaac cccatgaacg cgcggcgggc gcggggagag cccggcaatg       780
     ccaagatggg caccaccata accaagcaag aatacatggg cgagcttcat tcttcttcaa       840
     agattaaaac ttacttgctc gaccccaaga atgtaaggag cttccctcag ttaagcgggc       900
     ttgcaatcgg ctataacaag tacaagatca ctgacttcaa ggtgcggtac agtcccaaat       960
     gcagcgacag tgagtgtggg ttaaccatag cttactccag cgactcttca gacccacctc      1020
     cgaagaacaa attcaacttg tttagcatga accacaagta cgaaacggcc gcgcacaagc      1080
     cactcctagt aacacttccc gtgtctaaag agaccagatt cttgcgggat aagtgtactg      1140
     atgattccaa actcgtagac agtggggcgg tgcacgtaat ggtagacggg aatcacgaag      1200
     gtcggcttgg agaactcttc ttcgagttaa ccatcgtgct ttctgaacct accttttgca      1260
     atcaccactc ccaagtcatt aaaggactca aggagagtga agggcccgaa tatgtcaaag      1320
     ttgagcctga caaggagacc gtgaaacttg ttttccaggc agcgggggcg tacttagttt      1380
     ctatagtggc ctccaaacta gagcgaatcg ggcagcttgg tgcttctgaa ggtgacaagc      1440
     tggtagtgga tggtgctgat aagagcgcct gcctctgtag aatagaggcg gagcaacctg      1500
     gtagtgctgt agtattagtg tatgccagca gggaggccat taccctgcga gctcatatca      1560
     acaagctatg aggaaagcca ctgcggtggg gtcagtctcc tggtgcgcca acacccagaa      1620
     ggggagacaa cttcagtggt tgataacccg atgcttagta tgagcctaga aaaacctaaa      1680
     aacagagtgc tactgctttc agcgtgcgag ctttatttgc tcacttcctc cgtcgataaa      1740
     atcccgattt ctcgggtggg cttcggcgga catccttaat gaagaacggg ggggtaaccc      1800
     acccccctga tctgccc                                                     1817
//