ID   EU852913; SV 1; linear; genomic RNA; STD; VRL; 1817 BP.
XX
AC   EU852913;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   28-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Pelargonium line pattern virus isolate SPA0 clone 2 putative movement
DE   protein (p7), putative movement protein (p9), and coat protein (CP) genes,
DE   complete cds.
XX
KW   .
XX
OS   Pelargonium line pattern virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Pelarspovirus.
XX
RN   [1]
RP   1-1817
RX   DOI; 10.1016/j.virusres.2010.10.022.
RX   PUBMED; 20979982.
RA   Castano A., Ruiz L., Elena S.F., Hernandez C.;
RT   "Population differentiation and selective constraints in Pelargonium line
RT   pattern virus";
RL   Virus Res. 155(1):274-282(2011).
XX
RN   [2]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   "Sequence variability of distinct isolates of Pelargonium line pattern
RT   virus";
RL   Unpublished.
XX
RN   [3]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   ;
RL   Submitted (26-JUN-2008) to the INSDC.
RL   Instituto de Biologia Molecular y Celular de Plantas, Ingeniero Fausto Elio
RL   s/n, Valencia, Valencia 46022, Spain
XX
DR   MD5; d3bd5d86c6964fcbd85cc1b0552d9389.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1817
FT                   /organism="Pelargonium line pattern virus"
FT                   /host="Pelargonium zonale"
FT                   /lab_host="Chenopodium quinoa"
FT                   /isolate="SPA0"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /clone="2"
FT                   /db_xref="taxon:167019"
FT   gene            208..399
FT                   /gene="p7"
FT   CDS             208..399
FT                   /codon_start=1
FT                   /gene="p7"
FT                   /product="putative movement protein"
FT                   /db_xref="GOA:C6F3J3"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3J3"
FT                   /protein_id="ACJ38439.1"
FT                   /translation="MDIQSKDTNLSVKEAGKSAKRGSTKNKLDIAHSGVSKGTSRDLVG
FT                   ANFVTVADKVEFVVHLNF"
FT   gene            305..571
FT                   /gene="p9"
FT   CDS             305..571
FT                   /codon_start=1
FT                   /transl_except=(pos:305..307,aa:Met)
FT                   /gene="p9"
FT                   /product="putative movement protein"
FT                   /note="non-canonical start codon"
FT                   /db_xref="GOA:C6F3J4"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3J4"
FT                   /protein_id="ACJ38440.1"
FT                   /translation="MEYPRVHLAILSVLILSQLLIKWNLWSISISSCLPQPHLLHPNLL
FT                   VCIVLCIFFSSVLSQGQSYSYSYFSTSTSDKFISVAVGNGGQG"
FT   gene            555..1571
FT                   /gene="CP"
FT   CDS             555..1571
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C6F3J8"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3J8"
FT                   /protein_id="ACJ38441.1"
FT                   /translation="MAAKDNPAVLAAVARREQWAIKLQSKGWGSLSKAQKATARSYGIG
FT                   NPPAVVVPRTTRLVAGNPMNVRRARGEPGNAKMGTTITKQEYMGELHSSSKIETYLLDP
FT                   KNVRSFPQLSGLAIGYNKYKITDFKVRYSPKCSDSECGLTIAYSSDSSDPPPKNKFNLF
FT                   SMNNKYETAAHKPLLVTLPVSKETRFLRDKCTDDSKLVDSGAVHVLVDGNHEGRLGELF
FT                   FELTIVFSEPTFCNHHSQVIKGLKESEGPEYVKLEPDKETVKLVFQAAGAYLISIVASK
FT                   LERIGQLGASEGDKLVVESTDKSACLCRIEAEQPGSAVVLVYASREAITLRAYIDKL"
XX
SQ   Sequence 1817 BP; 482 A; 440 C; 472 G; 423 T; 0 other;
     gaaaatggcc ttctacgggg actactattg gaagtgggtc aaccagcata acggcaagta        60
     tgaaccggtg actgaggaag ctcggcactc gttccacttg gcgtttgggg tcagccctga       120
     ccaacagttg gccttggagg ctatatactc ccgcaagtcg ctactttggg agtcctcccc       180
     ctttacattt gaagttggcg ctatcgaatg gatattcaat caaaagatac caatctaagt       240
     gtaaaggagg cagggaaatc agcaaagcgc ggaagtacaa agaacaagct agacatagct       300
     cacagtggag tatccaaggg tacatctcgc gatcttgtcg gtgctaattt tgtcacagtt       360
     gctgataaag tggaatttgt ggtccatctc aatttctagt tgcttaccac agccacattt       420
     gttgcaccct aatctacttg tctgcatcgt gttgtgcatc ttctttagtt cagttcttag       480
     ccagggacag agttatagtt atagttactt ttcaactagc accagtgata aattcatctc       540
     agtagctgta ggaaatggcg gccaaggata atccggcggt cctcgcagct gtggcaaggc       600
     gggagcaatg ggcgatcaag ctccaatcca agggttgggg ctctctgtcc aaggcccaaa       660
     aagccactgc acgctcgtac gggataggga accctccggc agtcgtggtg cctcgcacta       720
     ctcggctggt ggctggaaac cccatgaacg tacggcgggc gcggggagag cctggcaatg       780
     ccaaaatggg caccaccatt accaagcaag aatacatggg cgagcttcat tcttcttcaa       840
     agattgaaac ttacttgctc gaccccaaga atgtgaggag cttccctcag ctaagcgggc       900
     ttgcaatcgg ctataacaag tacaagatca ctgacttcaa ggtgcggtac agtcccaaat       960
     gtagcgacag tgagtgtggg ttaaccatag cttactccag cgactcttca gacccaccgc      1020
     cgaagaacaa attcaacttg tttagcatga acaacaagta cgaaacagcc gcgcacaagc      1080
     cactcctagt aacacttccc gtgtctaaag agaccagatt cttgcgggat aagtgtactg      1140
     atgattccaa gctcgtagat agtggggcgg tgcatgtctt ggtggacggg aatcacgaag      1200
     gcaggctagg agaactcttc ttcgagttaa ccatcgtgtt ttccgaacca accttttgca      1260
     accaccactc ccaagtcatc aaaggactca aagagagtga agggcccgaa tatgttaaac      1320
     ttgagcctga caaggagacc gtgaaactgg ttttccaggc agcgggggcg tacttaattt      1380
     ctatagtagc ctccaagcta gagcgaatcg ggcagcttgg tgcttctgaa ggtgacaagc      1440
     tggtagttga aagtactgat aagagtgcct gcctctgtag aatagaggcg gagcaacccg      1500
     gtagtgctgt agtattagtt tatgccagca gggaggctat taccctgcga gcttacatcg      1560
     ataagctatg aggaaagcca ctgcggtggg gtcagtctcc tggtgcgcca acacccagaa      1620
     ggggagacaa cttcagtggt tgataacccg acgcttagtg taagcctaga aaaaaccaaa      1680
     aacagagtgc tactgctttc agtgtgcgag ctttaatcgc tcacttcctc cgtcgataaa      1740
     atcccgattt ttcgggtggg cttcggcgga catccttaat gaagaacggg ggggtaaccc      1800
     acccccctga tctgccc                                                     1817
//