ID EU847740; SV 1; circular; genomic DNA; STD; VRL; 2792 BP. XX AC EU847740; XX DT 29-JUL-2008 (Rel. 96, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Tomato yellow leaf curl Mali virus clone GHK2 segment A, complete sequence. XX KW . XX OS Tomato yellow leaf curl Mali virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2792 RX DOI; 10.1094/PDIS-92-11-1585B. RX AGRICOLA; IND44148991. RA Osei M.K., Akromah R., Shih S.L., Lee L.M., Green S.K.; RT "First Report and Molecular Characterization of DNA A of Three Distinct RT Begomoviruses Associated with Tomato Leaf Curl Disease in Ghana"; RL Plant Dis. 92(11):1585-1585(2008). XX RN [2] RP 1-2792 RA Shih S.L., Osei M.K., Akromah R., Lee L.M., Green S.K.; RT ; RL Submitted (23-JUN-2008) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, RL Taiwan, Republic of China XX DR MD5; fe78fbcfa97b8f31ad3abcf08ab20d2d. XX FH Key Location/Qualifiers FH FT source 1..2792 FT /organism="Tomato yellow leaf curl Mali virus" FT /segment="A" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="Ghana:Kumasi" FT /clone="GHK2" FT /db_xref="taxon:260377" FT gene 145..495 FT /gene="V2" FT CDS 145..495 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B5AG39" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B5AG39" FT /protein_id="ACF70663.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEANRRYNHFHTRLEGSPKAELRQPIQQPCCCPHCPRHKQATVMDVQAHV FT SKAQNIQNVSKP" FT gene 305..1081 FT /gene="V1" FT CDS 305..1081 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B5AG40" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B5AG40" FT /protein_id="ACF70660.1" FT /translation="MLKRTGDIIISTPASKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQIMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRVNSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1078..1482) FT /gene="C3" FT CDS complement(1078..1482) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancement protein" FT /db_xref="GOA:B5AG41" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5AG41" FT /protein_id="ACF70662.1" FT /translation="MDLRTGELITAPQAENGVFIWEINNPLYFKITDHNQRPFNMDHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLRPQTGRFLRIFRYQVLKYLNNLGVISINN FT VIRAVDHVLYDVLEKTIDVTETHDIKYNFY" FT gene complement(1223..1630) FT /gene="C2" FT CDS complement(1223..1630) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activation protein" FT /db_xref="GOA:B5AG42" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5AG42" FT /protein_id="ACF70661.1" FT /translation="MQHSSPSTSHCSQVPIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCINHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRPQPEAIQHGSRHHFNTDPIQSQ FT HQEGTGDSQMFSQLQNLDDLTASDWSFLKNI" FT gene complement(1539..2618) FT /gene="C1" FT CDS complement(1539..2618) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B5AG43" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5AG43" FT /protein_id="ACF70659.1" FT /translation="MAPPKRFKINAKNYFLTYPQCSLSLSEALSQLQTLETPVNKLYIK FT ICRELHENGEPHLHTLIQFEGKYQCTNNRFFDLVSPSRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTIDWGEFQIDGRSARGGQQSANDAYAAAINSGSKSEALRVIRELAPKDYVLQFH FT NLNNNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMSSAARPWRPDSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIFSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNLSLKNWALKNATFITIYKPL FT FSSANQGPTQDSQEETNQA" FT gene complement(2159..2461) FT /gene="C4" FT CDS complement(2159..2461) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5AG44" FT /protein_id="ACF70664.1" FT /translation="MGNLICIPLFSSKESTSAQITDSSTWYPQVDQHISIQTFRELNHH FT LMSSPTSIRMETPSIGESFRSMEGLQGGDNNLQTMLTQQLLTQEVSRKLLESLGN" XX SQ Sequence 2792 BP; 780 A; 527 C; 600 G; 885 T; 0 other; accggatggc cgcgcccttc cttttgttgt ccctacttgg ttcctataga cgtcactatc 60 atccaatcaa attgcatcct caaacgttag ataagtgttt atttgtcttt atatacttgg 120 tctccaagtt ttttgtcatg taatatgtgg gatccactct taaatgaatt tcctgaatct 180 gttcacggat ttcgttgtat gttagctatt aaatatttgc aggccgttga ggaaacatat 240 gagcccaata ctttgggcca cgatctaatt agggatctta tatctgttgt aagggcccgt 300 gactatgttg aagcgaaccg gcgatataat catttccaca cccgcctcga aggttcgccg 360 aaggctgaac ttcgacagcc catacagcag ccgtgctgct gcccccattg tccaaggcat 420 aaacaagcga cggtcatgga cgtacaggcc catgtatcga aagcccagaa tatacagaat 480 gtatcgaagc cctgatgttc cccgtggatg tgaaggccca tgtaaggtcc aatcttatga 540 gcaacgggat gacattaagc atactggtat tgttcgttgt gttagtgatg ttactcgtgg 600 ttctggtatt acccacagag tgggtaagag gttctgtgtt aagtccatat attttttagg 660 taaggtctgg atggacgaaa atatcaagaa gcagaaccat actaatcaaa tcatgttctt 720 cttggtccgt gatagaaggc cctatggaaa cagcccaatg gattttggac aggtttttaa 780 tatgttcgat aatgagccga gtaccgcaac agtgaagaat gatctccggg ataggtttca 840 agtgatgagg aaatttcatg ctaccgttat tggtgggcct tctggaatga aggaacaggc 900 tttagttaag agattcttta gagttaacag tcatgtaact tataatcatc aggaggcagc 960 caagtatgag aatcatactg aaaacgcctt gttattgtat atggcatgta cgcatgcctc 1020 taatccagtg tatgcaacta tgaaaatacg catctacttc tatgattcaa tatcaaatta 1080 ataaaaatta tactttatat catgggtttc tgttacatct attgtctttt caagtacatc 1140 atataataca tgatcaactg ctctaattac attgttaatg gaaattacac ctaaattatt 1200 taaatattta agaacttgat atctaaatat tcttaagaaa cgaccagtct gaggccgtaa 1260 ggtcgtccag attctgaagt tgagaaaaca tttgtgaatc cccagtacct tcctgatgtt 1320 gtgattgaat cggatctgta ttgaaatgat gtcgtgatcc atgttgaatg gcctctggtt 1380 gtggtctgtt atcttgaaat aaaggggatt gtttatctcc cagataaaaa cgccattctc 1440 tgcttgagga gcagtgatga gttcccctgt gcgtaaatcc atggttgatg cagttgatgt 1500 ggagatagta tgagcagcca cagtctaggt ctacacgctt acgcctgatt ggtttcttct 1560 tggctatctt gtgttggacc ttgattggca cttgagaaca gtggcttgta gatggtgatg 1620 aatgttgcat tcttgagagc ccagtttttt aacgacaggt ttttttcttc atctagatat 1680 tctttatacg atgaagtagg tcctggattg cagaggaaaa tagtgggaat tccaccttta 1740 atttgaatgg gtttcccgta ttttgtgttg ctttgccagt ccctttgggc ccccatgaat 1800 tctttaaagt gctttaaata atgcgggtct acgtcatcaa tgacgttgta ccacgcatca 1860 tttgaaaata tcttagggct gagatcgaga tgtccacaca aataattgtg tggacctaac 1920 gatcgtgccc acattgtttt tccggtacga ctatcaccct cgattacaat actatcaggt 1980 ctccatggcc gcgcagcgga agacatgacg ttctcggaca cccatacttc aagttcctct 2040 ggaacttgat taaaagaaga agataaaaaa ggtgaaatat aaggagctgg aggctcctga 2100 aaaattctat ctaaattatt atttaaatta tgaaattgta aaacgtaatc tttgggggct 2160 agttccctaa tgactctaag agcttccgac ttacttcctg agttaatagc tgctgcgtaa 2220 gcatcgtttg cagattgttg tccccccctt gcagaccttc catcgatctg aaactctccc 2280 caatcgatgg tgtctccatc cttatcgatg taggacttga catcagatga tgatttagct 2340 ccctgaatgt ttggatggaa atgtgttgat ctacttgggg ataccaggtc gaagaatctg 2400 ttatttgtgc actggtactt tccttcgaac tgaataaggg tatgcaaatg aggttcccca 2460 ttttcgtgaa gctctctgca aattttaatg tataatttat ttacaggagt ttctagggtt 2520 tgtagttggg aaagggcttc agataacgaa agagaacact ggggataagt aaggaaataa 2580 tttttggcat ttattttaaa acgctttggg ggagccattt ggtcaatgta ccccgattga 2640 cttggatttc atttggcacc tgcaatcggt gtaatggggt acaatatata cttgtacccc 2700 aaatggcaat ttagtaattt tgcaaatata tattgtaatt aaaaatacaa aattcaaaaa 2760 tgaaatcatt aaagcggcca tccgataata tt 2792 //