ID EU839576; SV 2; circular; genomic DNA; STD; VRL; 2791 BP. XX AC EU839576; XX DT 18-JUN-2009 (Rel. 101, Created) DT 18-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Ipomoea yellow vein virus isolate ES:Mal:IG1:06, complete genome. XX KW . XX OS Ipomoea yellow vein virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2791 RX DOI; 10.1099/vir.0.012542-0. RX PUBMED; 19515824. RA Lozano G., Trenado H.P., Valverde R.A., Navas-Castillo J.; RT "Novel begomovirus species of recombinant nature in sweet potato (Ipomoea RT batatas) and Ipomoea indica: taxonomic and phylogenetic implications"; RL J. Gen. Virol. 90(Pt 10):2550-2562(2009). XX RN [2] RP 1-2791 RA Trenado H.P., Lozano G., Navas-Castillo J.; RT ; RL Submitted (20-JUN-2008) to the INSDC. RL Virology, CSIC, Mayora Algarrobo-Costa, Algarrobo-Costa, Malaga 29760, RL Spain XX RN [3] RC Sequence update by submitter RP 1-2791 RA Trenado H.P., Lozano G., Navas-Castillo J.; RT ; RL Submitted (16-JUN-2009) to the INSDC. RL Virology, CSIC, Mayora Algarrobo-Costa, Algarrobo-Costa, Malaga 29760, RL Spain XX DR MD5; 745b5f24dfedbd7ad257be959b1d07d3. XX CC On Jun 17, 2009 this sequence version replaced gi:213958828. XX FH Key Location/Qualifiers FH FT source 1..2791 FT /organism="Ipomoea yellow vein virus" FT /host="Ipomoea indica" FT /isolate="ES:Mal:IG1:06" FT /mol_type="genomic DNA" FT /country="Spain" FT /collection_date="Jun-2006" FT /clone="IG1" FT /db_xref="taxon:653358" FT gene 42..440 FT /gene="V2" FT CDS 42..440 FT /codon_start=1 FT /gene="V2" FT /product="MP" FT /db_xref="GOA:C5H6N6" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:C5H6N6" FT /protein_id="ACJ54739.1" FT /translation="MMALLYKDQSGCRAWRPSMAEMWDPLQNPLPDTLYGFRCMLSVKY FT LQGILKKYEPGTLGFELCSELIRIFRVRQYDRANARFAEISSLWGETGKTEAELRDSYR FT ALHWECCPNCCPKLCPDFKKRPDEEKEG" FT gene 265..1029 FT /gene="V1" FT CDS 265..1029 FT /codon_start=1 FT /gene="V1" FT /product="CP" FT /db_xref="GOA:C5H6N7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C5H6N7" FT /protein_id="ACJ54740.1" FT /translation="MTGRMRVSPRFHPYGGRQVRRRLNFETAIVPYTGNAVPIAARSYV FT PISRSVQMKRRRGDRIPKGCVGPCKVQDYEFKMEVPHSGTFICVSDFIRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITFWLIRDRRPNKDPLTFTQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKSLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRSYFYDSLKN" FT gene complement(1026..1463) FT /gene="C3" FT CDS complement(1026..1463) FT /codon_start=1 FT /gene="C3" FT /product="REn" FT /db_xref="GOA:C5H6N8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5H6N8" FT /protein_id="ACJ54741.1" FT /translation="MDSRTGESLNHAQITRAAEFFNNPMSVGQTAPFHLRLMYVHTNNL FT DSKTIMKVQLQVNHRNRREIGFQKIFLQFRIITTRLIGAIPNWTGISNRLKWRICNSLA FT SLGYFSLFNLVYVIRHLPQQCLWVEEVDVIDCKDDIKVLLY" FT gene complement(1177..1626) FT /gene="C2" FT CDS complement(1177..1626) FT /codon_start=1 FT /gene="C2" FT /product="TrAp" FT /db_xref="UniProtKB/TrEMBL:C5H6N9" FT /protein_id="ACJ54742.1" FT /translation="MSTAPSGYKRKCPAQEPIHAAAKKRQRKIPEPRTRIVWKGCGCSA FT FITNACKFQHGFTHRGVTKSCTDYESSRILQQSHVCGSDCTIPSTTDVCPYKQPRLKDD FT HESAASSQPPEQEGNWIPEDLPPIPDHNNASDWCYSQLDWYFQSP" FT gene complement(1535..2629) FT /gene="C1" FT CDS complement(1535..2629) FT /codon_start=1 FT /gene="C1" FT /product="Rep" FT /db_xref="GOA:C5H6P0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C5H6P0" FT /protein_id="ACJ54743.1" FT /translation="MPRKQGFRVQAKNIFLTYPKCSLSKEQALEQLRATHCPSDKLFIR FT VSQEKHQDGSLHLHVLIQFKGKAEFKNPRHFDLQHPHNSSQFHPNFQAAKSSSDVKSYI FT EKDGDYLDWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDAAARPERPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWAVKNAVFCDVDSPF FT WIQEEVSRSGTNTRGGQEEAEENS" FT gene complement(2215..2472) FT /gene="C4" FT CDS complement(2215..2472) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5H6P1" FT /protein_id="ACJ54744.1" FT /translation="MGLCISMFSSSSRGKQSSKTHDISTYNIHITPPNSIQISRQLSPP FT RMSSHTSRRTETTSTGVNSRSTADLLEEASRLLTTLPQRH" XX SQ Sequence 2791 BP; 726 A; 579 C; 657 G; 829 T; 0 other; accggtgccc gccgcgcccc cttttgtggg tcccacgaat aatgatggca ttgctttata 60 aggaccaatc aggttgccgt gcttggcgcc caagtatggc tgaaatgtgg gatcctcttc 120 agaacccact accagatact ttatacggtt tcaggtgtat gctttccgtt aaatacctac 180 aaggtatttt gaagaaatac gagccaggaa ccctagggtt cgagctctgt tcggagttaa 240 tccgtatatt cagggtcagg cagtatgacc gggcgaatgc gcgtttcgcc gagatttcat 300 ccctatgggg ggagacaggt aagacggagg ctgaacttcg agacagctat cgtgccttac 360 actgggaatg ctgtcccaat tgctgcccga agctatgtcc cgatttcaag aagcgtccag 420 atgaagagaa ggaggggtga tcgcattccg aagggatgcg tgggtccttg taaggtacag 480 gattacgaat tcaagatgga agtcccacat agtgggacct ttatttgtgt ttctgatttt 540 attagaggta ctgggcttac ccatcgtttg ggtaagaggg tgtgtattaa gtccatgggt 600 attgatggta aggtttggat ggatgacaac gtcgccaaga gggaccacac caacatcatt 660 actttctggt tgatccgaga taggaggccc aataaggatc cattgacgtt tacacaggcg 720 tttacaatgt atgataacga gcccactact gctaagatcc gaatggatct gagagataga 780 atgcaggtgt tgaagaaatt ttctgttact gtttccggtg gtccttataa ccacaaagag 840 caggctttgg ttcggaagtt ttttaagagt ttgtataatc atgttactta taatcataag 900 gaggaagcta agtatgagaa tcatttagag aatgcattaa tgttgtattc tgctagcagt 960 catgctagca atcctgtgta tcagacactg cgttgcaggt cttattttta tgactcgctc 1020 aaaaattaat aaagaagtac ttttatatca tctttgcaat ctattacatc gacttcttct 1080 acccacaagc attgttgtgg taaatgtcta attacataaa ctaaattaaa caatgaaaaa 1140 taacctaaac tagctaaact attacaaatt cgccatttaa ggcgattgga aataccagtc 1200 caattgggaa tagcaccaat cagacgcgtt gttatgatcc ggaattggag gaagatcttc 1260 tggaatccaa tttccctcct gttccggtgg ttgacttgaa gctgcacttt catgatcgtc 1320 tttgagtcta ggttgtttgt atggacatac atcagtcgta gatggaatgg tgcagtctga 1380 cccacagaca tgggattgtt gaagaattct gctgctctcg taatctgtgc atgatttagt 1440 gactccccgg tgcgtgaatc catgctggaa cttgcaggcg ttggtgatga aggctgaaca 1500 accgcagccc ttccacacta tccttgtcct tggctcagga attttcctct gcctcttctt 1560 ggccgccgcg tgtattggtt cctgagcggg acacttcctc ttgtatccag aaggggctgt 1620 cgacatcaca gaaaactgcg tttttcacag cccagttctt cagtgcttct tgctctggct 1680 tgtccagcca gagtttaaat gaagagcctt ctcctggatt gcagaggaag atagtgggta 1740 ttccaccttt aatttgaact ggctttccgt atttacaatt gctttgccag tccttctggg 1800 cccccatgaa ctctttaaag tgctttaggt attgggggtt gacgtcatca atgacgttat 1860 accaagcact gttgctatac acctttggac tcaggtccaa atgcccacac agataattat 1920 gtggtcctaa ggatctagcc caaactgttt tacctattct acttggccct tctataacta 1980 tacttatggg cctctctggc cgcgcagcgg catccatgac attctcagca gcccaatcgc 2040 tgataatgtc aggaacatta ttgaaagaag aaatggaaaa aggtgaagaa tatacagaag 2100 gaggaggaga aaatatccta tctaaattgc taactaaatt atgatattga aatataaatt 2160 tttcagggag tttctccctg attatttgta acgcagcttc tttagaacct gcgtttaatg 2220 cctctgcggc agcgtcgtta gcagtctgct ggcctcctct agcagatctg ccgtcgatct 2280 ggaattcacc ccagtcgagg tagtctccgt ccttctcgat gtatgacttg acatccgagg 2340 aggacttagc tgcctggaaa tttggatgga attgggagga gttatgtgga tgttgtaggt 2400 cgaaatgtcg tgggtttttg aactctgctt tccccttgaa ctggatgaga acatggagat 2460 gcaaagaccc atcttggtgt ttctcttggc taactctgat aaacagttta tcagacgggc 2520 aatgggttgc ccttaattgc tcaagcgctt gctctttaga taaagaacat ttggggtacg 2580 ttaagaaaat atttttggct tgaactctaa acccttgctt acgtggcatt ttgaatcgga 2640 ggctctcaaa gctctacgga attggaggat ttggaggact atatatagtg agcctccaaa 2700 tggcattttg gtaatttaga agttcatttt acctttaatt caaattccga caattctggg 2760 accaccaaaa ggcgggcacc gtattaatat t 2791 //