ID EU835937; SV 1; linear; genomic RNA; STD; VRL; 6539 BP. XX AC EU835937; XX DT 21-JUL-2008 (Rel. 96, Created) DT 21-JUL-2008 (Rel. 96, Last updated, Version 1) XX DE Potato virus T from Peru, complete genome. XX KW . XX OS Potato virus T OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-6539 RA Russo M., Rubino L., Martelli G.P.; RT "Sequence analysis of the Potato virus T genome"; RL Unpublished. XX RN [2] RP 1-6539 RA Russo M., Rubino L., Martelli G.P.; RT ; RL Submitted (19-JUN-2008) to the INSDC. RL Istituto di Virologia Vegetale, Consiglio Nazionale delle Ricerche, Via RL Amendola, 165/A, Bari 70126, Italy XX DR MD5; 62df923d6dab6bf0137ee0707a1e84ad. DR EuropePMC; PMC6339470; 30671312. XX FH Key Location/Qualifiers FH FT source 1..6539 FT /organism="Potato virus T" FT /host="Chenopodium amaranticolor" FT /mol_type="genomic RNA" FT /country="Peru" FT /collection_date="1992" FT /db_xref="taxon:36403" FT CDS 75..4895 FT /codon_start=1 FT /product="replicase" FT /note="RNA-dependent RNA polymerase; contains FT methyltransferase domain, papain-like protease, RNA FT helicase, and RNA dependent RNA polymerase domains" FT /db_xref="GOA:B5ACE2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B5ACE2" FT /protein_id="ACF39932.1" FT /translation="MSFSFRTPAELFVQSLPKEYAEACFKSHAANFQIRSDKGVGLFDF FT ACSSVVKERLTKAGIPVSAFCNQEHSHPASKMIENHLLYNILPNYLNLKNYTAISIKDS FT KVRKLLKNGVDSLETFNRLFSCKDALRYVDPETCDMDKFIARVHHSTRIFLFDELHYWS FT MNSLSDFLDRSNVKELLATIVFPIEILLGSKRSLNPELYEFEISRGKLHFFPDGCTSES FT YSQPKDCDILKVNRIVTKTGKIFSVELIHTIGANHMVMIKEGSFDVDSERFFDRSSALT FT TSLLMPTRAGKALRIRRKFLLRLIIYLFSLKKPDHHSAIAKIRQSSDDSIFCDEIMLAD FT HVGKIFEKLDPASPFGVKGVFDLLTSIFKDIFLLDGLFNWSDRRKSEKFVEFMRALDYQ FT TNKVVTCTFSGGVMRSGFLAEFFLDNDCEASEGLDEVISRFDTFFDPKKEYSAHALRVN FT IKDRTPNPYGPMKARTPSVVLHREYITKVEFSSKAKKVNVLKERLTGEVSFEEARLQRM FT RYSDSQFVAGLAPKLRYVKMLTWKKDQKLFSEFPSEESNEVEMEDAFELRKGRTLKRGT FT KERDEDGANSEECEQLDSEDDVGSFDYEETKADSYEIDFEAILNRVNSGGLRGVCLLDA FT LAKITGTKREITLSILLGRDGTWADWFLKDKGATFDDVFKAVSDLDLNCTICTKEGSFN FT AHVNRNYKHNFLYLFDEHVSLERPKVMLFEQVRHQKIDFLGAFEKCPGAGKFRYEALAE FT RGSLLASALKDNLTGVISSKFNWDPKCEFVDIEKEILVVAGFAGSGKTRGICQIVKSMF FT NNKKTLVLSPRKNLADDWVKNLANLHRPSHVKVMTFEAGLRRVQKSSLIVIDELSLMPN FT GYLDMLINMNEEATFITLFDPLQARYHAKSDVLRVSPENDVDRIKVPKYLFFSKRMSSE FT LDFFDVRCSSDQKKWELHGKQYREPAALFRDIKGQEFTILSPSFETAREMSKYADIKDG FT CKSMTFGESQGLTVNKAVIVVDQDLVATSVLHWIVALTRSRQGFVILVHKVFDMKTLIQ FT PVQNSIIGLVLRGVKVQENIFINTAGKCLSEAEIVEELETFKRTEEDEDLLEGDPWLKG FT QLFLCQSVELDEVTPEEPLRHESPPRTHLPLPVEGLTPLLMSNVKAREDREFITPSGWS FT KQFRDDKENVDWRNVSYADAFETIYPKHEASDDITLWAAIQKRIVMADPFRNAMKLQKV FT EPISAEIFNEMNKILLLNPHVSVDRDQVYKEFLRKRLNKSKKLIESHSERSSDDWPIDH FT FFLFMKSQLCTKFEKRFVDAKAGQTLACFSHKLLTRFGPAFREFEKKFTANLPPSWYIH FT TMKNFDQLNNWVINYVDQEEGTESDYEAFDRSQDAIILGLEIECLKLFGWDQDLIDDYR FT KLKLRMGCRWGAIAIMRFTGEFGTFFFNTIANIAFTCLRYNITRDTVIAFAGDDMYASG FT KLEIRKDREDLLAHLTLKAKVQFTEKPMFCGWYIKKMGIVKEPRLVLERWLIAERKKVI FT DQCFINYSIEVSYGYRLGEYLWEYFDNLEDFQAIVRLVIKKKKQLPPAIRRIFETSNGV FT DFSGEVQETMGGEGEHHGSCGLWCNLH" FT CDS 4804..5880 FT /codon_start=1 FT /product="movement protein" FT /note="role in virus cell-to-cell movement; contains FT p30-like superfamily motifs" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:B5ACE3" FT /protein_id="ACF39933.1" FT /translation="MELISVEKFRRQWEERESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDLPDNGKIISKDIPLFDQEEIDNIMKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIDKRRTDLRRATLACRKIKFVNGRCAFMMKPNFSVRKEDLRDGDTFCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFAHAVDKTFASRTVHDLVGTDILSLDQLDRATLE FT DLEEVRRSPILRLTAPDERVMIERGNWFQKKPAIRRRSFGKRRPQKSSSVRSASLPRFS FT CSERLERGFESESLAGLVLDQKYGPNNFCADKRRSPESDSGSLQQSMGRSSHSGSEGWG FT KGTDVAIPLRKNRNIFSE" FT CDS 5714..6355 FT /codon_start=1 FT /product="coat protein" FT /note="viral capsid" FT /db_xref="GOA:B5ACE4" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:B5ACE4" FT /protein_id="ACF39934.1" FT /translation="MDPTTFVQIRDEVLNLTVAAYSSQWDGQATQALKDGAKEQMLRFL FT FGRIAISSASRNTIWPDTEIASEDLQIGMSAASAGPPPVAAAPISLIFRVNFNSYVKML FT IALSNTSTNSFVKNKTLRQMCMPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" XX SQ Sequence 6539 BP; 2013 A; 1145 C; 1576 G; 1805 T; 0 other; ggataagctt gccggtaagc cgaaaaacta cctggccttg aacctcaaaa gacactaatt 60 gtctacaatt aaaaatgtct ttctccttca ggacgccagc agaacttttc gttcagtctt 120 tgcctaaaga atatgcggaa gcatgtttta aatctcatgc agctaatttc cagatccgat 180 ccgataaggg agttggctta tttgattttg catgttcttc tgtggtcaag gaaagactca 240 ctaaggccgg tatacccgtt tctgcctttt gcaatcaaga acattctcac cccgcatcta 300 agatgattga aaaccatctc ctgtacaata ttttacctaa ttacctgaac ctcaagaatt 360 acaccgcaat ttcaattaag gattccaaag ttagaaagtt gttgaagaat ggtgtagata 420 gtttagaaac cttcaataga ttatttagct gtaaagatgc tttgagatat gtagatcccg 480 agacttgtga tatggataaa ttcatagcta gggttcatca ttcaactagg atatttctat 540 ttgatgagct ccattactgg tccatgaact ccctatctga ctttttggat aggtctaatg 600 tcaaagagct gttggccact atagtttttc caattgaaat tctgcttgga tcaaaaagga 660 gtttgaatcc agaactctat gaatttgaga tttcaagagg aaagttacat ttctttccag 720 atggttgcac ttcagagtca tattcacaac caaaagattg tgatatcttg aaggtgaaca 780 gaattgtgac taagactggg aaaatcttct cagttgagct tattcacacc attggggcca 840 atcacatggt gatgataaaa gaaggttcct ttgatgttga ctcagaaagg ttctttgaca 900 gatcctcagc tttgaccact agtcttttaa tgcccactag agcaggtaag gcccttagaa 960 tcagaaggaa gtttcttttg agattgataa tttacctgtt ttcactgaaa aaacctgatc 1020 atcactctgc aatcgccaag atcaggcaaa gctcagatga ctctatcttt tgtgatgaga 1080 taatgttggc tgatcatgtt ggcaagatat tcgagaaatt ggatcctgct agcccttttg 1140 gagtcaaggg ggtctttgat ttgttaacaa gtatctttaa agatattttc ctactcgatg 1200 gtctcttcaa ttggtctgat agaagaaaat ctgagaagtt tgtagaattc atgagagctt 1260 tagattatca aaccaacaag gttgtcacct gcactttttc gggtggagtc atgaggagtg 1320 gcttcttagc ggaattcttc ttggacaacg attgcgaagc gagtgaaggg ctggatgagg 1380 taatttcaag gttcgacact ttctttgacc caaaaaaaga atattcggcg catgctttga 1440 gggtgaacat caaggacagg acaccaaacc catatggtcc aatgaaggca agaactccaa 1500 gtgtcgtact gcatagagag tacataacaa aggttgagtt ctctagcaag gcgaagaagg 1560 tcaatgtctt aaaagagcgg ttgactggag aggtgtcttt tgaagaggcc aggttgcaga 1620 gaatgcggta ctccgattct caatttgttg ctgggctggc gccgaaactg agatatgtca 1680 agatgttgac atggaaaaaa gatcagaagc tgttcagtga attcccctca gaagagtcaa 1740 atgaagttga gatggaggat gcatttgaat tgaggaaagg gagaactctg aagagaggga 1800 ccaaagagag ggatgaggat ggagcaaatt ctgaagagtg tgagcaactg gattcagaag 1860 atgatgttgg ttcatttgat tatgaggaaa caaaggctga ttcctatgaa attgactttg 1920 aggcaatttt aaatagagtc aactccggag gtcttcgagg tgtttgcttg ttggatgccc 1980 tggcaaaaat aactgggaca aaaagagaga tcaccctctc tattcttcta gggagggatg 2040 gcacctgggc cgattggttt ctgaaggaca agggcgccac ttttgatgat gtcttcaaag 2100 cagtctcgga tcttgatctg aattgtacaa tatgcacgaa agagggctca ttcaatgcac 2160 atgtgaatag gaattataag cataacttcc tttatctatt tgatgaacat gttagcctgg 2220 agaggccaaa agtcatgctc tttgaacagg taagacatca gaagatagac tttttgggtg 2280 cctttgaaaa atgtcccggg gctggtaagt tccgctacga ggcgttagct gagagaggaa 2340 gtctgctagc ttctgcttta aaagacaatc tcactggagt catttcaagc aaattcaatt 2400 gggaccccaa atgtgagttc gtggatattg aaaaggaaat tcttgttgtg gctggttttg 2460 caggttctgg aaagactcgg ggcatatgtc aaatcgtcaa gagcatgttt aacaacaaga 2520 aaactctcgt tcttagtcca aggaagaatc tggcggatga ttgggttaag aacttggcca 2580 atttgcacag gccaagtcat gtgaaggtaa tgacatttga agctggtttg aggcgagtgc 2640 agaagtcttc tctaattgtg atagatgagt tatctttgat gccaaatggt tatctagata 2700 tgctcataaa tatgaatgag gaggccacat tcataacact ttttgatcca ctgcaggcta 2760 gataccatgc aaaaagtgat gtgctcaggg tgagccctga aaatgacgtt gacagaataa 2820 aggtgccgaa atacctcttc ttctcaaaga gaatgagttc agagctagat ttcttcgatg 2880 ttagatgctc atctgatcaa aaaaaatggg aacttcatgg aaagcaatat cgtgagccag 2940 ccgcactatt cagagacatc aaaggtcagg aattcacaat actatcacca tcatttgaga 3000 ctgctagaga aatgtccaag tatgcagaca tcaaggatgg gtgcaaatca atgacctttg 3060 gtgaatcaca aggtctaaca gtcaacaagg cagtgattgt agttgaccaa gatctggttg 3120 caacatcagt gttgcattgg atagttgcat tgactaggag cagacagggt tttgtcatac 3180 tggtgcacaa agtctttgac atgaaaacat tgattcaacc tgttcagaat tctataattg 3240 gtctcgtgct aagaggggtt aaggttcaag agaacatctt tatcaacaca gctggaaagt 3300 gtctgtctga agcagaaata gtggaggagt tggagacctt caaaaggaca gaagaggatg 3360 aagacctgct cgaaggtgac ccttggttaa agggtcagct ctttctttgt caaagtgttg 3420 aattggatga agttacacct gaggaaccat tgaggcatga gagcccacct aggacacatt 3480 tacctctccc ggttgaagga ttgacaccgc ttttaatgtc aaatgttaag gcaagagagg 3540 atagagagtt cataactcca agtggatgga gcaaacaatt cagggatgat aaagaaaatg 3600 tggactggag aaatgtctca tatgctgatg cctttgaaac aatttatccg aaacatgagg 3660 caagtgatga tataacttta tgggccgcca ttcaaaagag aatcgtgatg gcagatccat 3720 tcagaaatgc aatgaagctg caaaaagtgg aaccaatctc agctgagatt ttcaatgaaa 3780 tgaacaaaat acttctcttg aatccacatg tgagtgttga tagagatcaa gtctacaaag 3840 agttcttgag aaagaggtta aataagtcaa agaagttgat agaatcccac tctgaaaggt 3900 catctgatga ttggccaata gatcacttct tcctgtttat gaagagccag ctatgtacaa 3960 agttcgagaa gaggtttgtg gatgcaaagg ctggtcaaac actggcttgt ttttcgcaca 4020 agttattgac aagatttggg cctgcattta gagagtttga aaagaagttc acagcaaatt 4080 tgccgccatc atggtatatt cacacaatga agaatttcga tcaactgaac aactgggtca 4140 ttaactacgt tgatcaagaa gagggcactg aatctgatta tgaagctttc gatagatcac 4200 aggatgcaat cattctaggt cttgaaatag aatgtctgaa attgtttgga tgggatcaag 4260 acctgatcga tgattacaga aagctgaaac ttcggatggg atgtagatgg ggggcaattg 4320 caattatgag attcacaggt gaatttggaa cattcttttt caacacaatt gcaaacatcg 4380 cattcacatg tttgaggtat aatatcacca gagacactgt gattgcgttt gcaggagatg 4440 acatgtatgc atccggaaaa ctcgaaatca ggaaagatag agaagacctg ctggcccatc 4500 taactttaaa ggcaaaagta cagttcacag aaaagccaat gttctgtggg tggtacatca 4560 agaagatggg aattgtaaag gagccaagat tggtacttga gaggtggttg atagctgaaa 4620 gaaagaaggt gatagatcaa tgcttcatca actactcaat cgaggtatcc tatggataca 4680 gattaggtga gtacctctgg gagtattttg ataatttaga ggatttccaa gcaatagtga 4740 gattggtgat aaagaagaag aagcaactgc caccagctat aagaaggatt tttgaaacaa 4800 gcaatggagt tgatttcagt ggagaagttc aggagacaat gggaggagag ggagagcatc 4860 acgggtcctg tggactctgg tgcaatctac actaactccg cgtttcacaa tctgaagacc 4920 aaatggcacg tttacaagtc tgagtgcagt attggtcttg atttgcccga taacggaaaa 4980 ataatatcaa aggacatccc cctctttgat caagaggaga ttgataacat catgaaagac 5040 gacaaacagg tattcgtcca tctgggagcc tttgtattcg gacttgttgc acactttcct 5100 gtcgatgagg aagtggaagg attagtctct atcattgaca aacgtcggac tgatctaagg 5160 agggcaaccc tagcttgcag gaaaattaaa tttgtgaatg gaagatgcgc tttcatgatg 5220 aaaccaaact tttcagtcag gaaggaggat ttaagggatg gtgacacttt ttgtgccgcc 5280 atcaaaatca aaaaccttgg ctttgaaggt gggttctttc cattttcagc atgtggcgga 5340 gtgatttaca gaacctcaaa tgtgagtttt gcacatgctg ttgacaaaac ctttgcttct 5400 aggactgtgc atgatttggt gggtactgat atactctctt tggatcaact ggaccgagcc 5460 actctggagg accttgagga agtgagaagg agccccattc taaggttaac cgctcctgat 5520 gagagagtaa tgatagaaag agggaattgg ttccagaaga aaccggcaat aaggaggaga 5580 agttttggga aaaggagacc ccaaaaaagt tcgtcagtta ggtcggcgag tttgcctcga 5640 ttttcatgtt ctgagaggtt agaaaggggc tttgaatcag agagtctggc tggattagtg 5700 ctagatcaga aatatggacc caacaacttt tgtgcagata agagacgaag tcctgaatct 5760 gacagtggca gcttacagca gtcaatggga cggtcaagcc actcaggctc tgaaggatgg 5820 ggcaaaggaa cagatgttgc gattcctctt cggaagaatc gcaatatctt cagcgagtag 5880 aaacaccatc tggcctgaca cggagatcgc gtcggaggat ctccagatag gtatgtcagc 5940 ggcttcagcg ggtccacctc cagtggctgc tgccccgata agccttatat ttagggtaaa 6000 ttttaattct tatgtcaaaa tgctaatagc tttgtccaac acttcaacaa attcctttgt 6060 aaagaataaa acactcagac aaatgtgtat gccttttgca aaatatgctt atggatactt 6120 atctgaaatg ggctatgcaa cttgggcata tgagaagatg cccaaacttt gtcgaaaggc 6180 taaatgggtt gcttttgatt ttgcatctgg gttgttgatt gatacaacaa tgcagttgaa 6240 tgatgatgaa aagaccgtca ttcaaggtct gggagctaga ttattcaaaa ctcaacagtc 6300 cattcaaatt gctgattcca caatggacgg tgaagctatc aatcgtgaaa tttgactgag 6360 aaagaggaga agagttggtc gtttgttaaa tccgcataat tggtcgcggt cttgagggtt 6420 gactggccct catttgaata aatttaaaat ctgcataatt gatcgcagtc tagggagttg 6480 atatgctccc cccgatgttc ttaatctagg gtttgcatgg tttttcaagt ttttaaagc 6539 //