ID   EU835196; SV 1; linear; genomic RNA; STD; VRL; 912 BP.
XX
AC   EU835196;
XX
DT   21-JUL-2008 (Rel. 96, Created)
DT   01-APR-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Shallot mite-borne latent virus isolate IPO-DLO coat protein (CP) gene,
DE   complete cds; and putative nucleic acid binding protein (NABP) gene,
DE   partial cds.
XX
KW   .
XX
OS   Shallot mite-borne latent virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Allexivirus;
OC   unclassified Allexivirus.
XX
RN   [1]
RP   1-912
RX   DOI; 10.1111/j.1365-3059.2009.02031.x.
RX   AGRICOLA; IND44175971.
RA   Perez-Egusquiza Z., Ward L.I., Clover G.R.G., Fletcher J.D.,
RA   Van der Vlugt R.A.A.;
RT   "First report of Shallot virus X in shallot in New Zealand";
RL   Plant Pathol. 58(2):407-407(2009).
XX
RN   [2]
RP   1-912
RA   Perez-Egusquiza Z.C., Ward L.I., Clover G.R.G.;
RT   ;
RL   Submitted (18-JUN-2008) to the INSDC.
RL   Ministry of Agriculture and Forestry, Plant Health and Environment
RL   Laboratory, 231 Morrin Road, St. Johns, Auckland 1140, New Zealand
XX
DR   MD5; d14cf9107b3e238b9a287913d0a2b04d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..912
FT                   /organism="Shallot mite-borne latent virus"
FT                   /host="shallot"
FT                   /isolate="IPO-DLO"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /collected_by="Rene Van der Vlugt"
FT                   /db_xref="taxon:547128"
FT   gene            49..837
FT                   /gene="CP"
FT   CDS             49..837
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B5ABX2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABX2"
FT                   /protein_id="ACF37242.1"
FT                   /translation="MNEDDLNRLNASGDLNGANNQRIPAGPSGVNQPTPSVTAGGQNQF
FT                   RPSGGLGNQGARPTEPSNQDELLPTEAEIEAITSDVESNSVAPKATIREILDALQAKRQ
FT                   NATPKDLFSLAWACYHNGSSRFVNLNTDAPCGITHAELKDLVEGFCTLRQFCSYYAKSC
FT                   YVSGKQQKKPPANWSRKGYPEEAKFAGFDFFNAVLSESSPAPPGGMRFKPTQAEILGHS
FT                   MNAKMSIVESRQSSHMVSTRADLLGRQQINEQPKPPMITF"
FT   gene            837..>912
FT                   /gene="NABP"
FT   CDS             837..>912
FT                   /codon_start=1
FT                   /gene="NABP"
FT                   /product="putative nucleic acid binding protein"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABX3"
FT                   /protein_id="ACF37243.1"
FT                   /translation="MHPHDLNLLCCLHFSKPSLPNDLKT"
XX
SQ   Sequence 912 BP; 256 A; 263 C; 206 G; 187 T; 0 other;
     atttaggggt gaaggtctgt gttaagttgt cgggtagctc gaaatacaat gaacgaagac        60
     gatttgaatc gtttgaatgc atcaggggac ctcaacggcg ccaataatca acgaatcccg       120
     gcgggaccat ctggcgtcaa ccaaccgacc ccgagcgtaa ctgcaggtgg tcaaaaccaa       180
     ttcagaccct cgggaggact aggcaaccaa ggcgcgcgcc caactgaacc aagtaatcag       240
     gatgaactat tgcccaccga agccgagatt gaagccatca ctagtgacgt ggagtccaat       300
     tctgtagcac ccaaggccac cattcgcgaa atcttggacg ccttgcaagc taagaggcaa       360
     aatgccaccc cgaaagatct attctcatta gcctgggcct gctaccacaa tggatcctca       420
     aggttcgtga acttgaacac tgacgcccct tgcggaataa cgcacgcgga gcttaaagac       480
     cttgtggaag gcttctgcac actcaggcag ttctgcagct actacgctaa atcatgctac       540
     gtttcaggaa aacagcagaa gaaacctcct gctaattggt ctcggaaagg atatcctgaa       600
     gaggccaagt ttgccggctt cgacttcttc aatgcagtgc tgagcgagtc ttccccagct       660
     ccaccgggcg gaatgcggtt caaacccacg caagctgaaa ttctcggcca ctcaatgaac       720
     gccaaaatgt ccatagtcga gtcccgacaa tcatcgcaca tggtctcaac tagagcagac       780
     ctcctaggcc gccaacagat taacgaacaa cccaagccgc cgatgataac tttctgatgc       840
     atccccacga tctaaatctt ctttgctgcc tacatttctc gaaaccttcc ctgcccaacg       900
     acctcaaaac tc                                                           912
//