ID   EU834064; SV 1; linear; genomic DNA; STD; VRL; 1283 BP.
XX
AC   EU834064;
XX
DT   02-AUG-2008 (Rel. 96, Created)
DT   23-MAR-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Tomato yellow leaf curl virus isolate Sh replication-associated protein
DE   (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and precoat
DE   protein (V2) and coat protein (V1) genes, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1283
RX   DOI; 10.1007/s11262-008-0310-5.
RX   PUBMED; 19112612.
RA   Fazeli R., Heydarnejad J., Massumi H., Shaabanian M., Varsani A.;
RT   "Genetic diversity and distribution of tomato-infecting begomoviruses in
RT   Iran";
RL   Virus Genes 38(2):311-319(2009).
XX
RN   [2]
RP   1-1283
RA   Heydarnejad J., Fazeli R., Massumi H.;
RT   ;
RL   Submitted (17-JUN-2008) to the INSDC.
RL   Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman
RL   Ave, Kerman, Kerman 7616914111, Iran
XX
DR   MD5; 74313fec823ee39d2962b0e833f86845.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1283
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="Sh"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Shiraz, Fars"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:10832"
FT   gene            complement(<1..666)
FT                   /gene="C1"
FT   CDS             complement(<1..666)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /note="rep"
FT                   /db_xref="GOA:B5ABL2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABL2"
FT                   /protein_id="ACF04228.1"
FT                   /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC
FT                   REFHENGEPHLHVLIQFEGKYQCKNQRFFDLSSPNRSAHFHPNIQAAKSSTDVKTYVEK
FT                   DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL
FT                   SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWGPVSIVIEGDSR
FT                   "
FT   gene            complement(222..515)
FT                   /gene="C4"
FT   CDS             complement(222..515)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABL3"
FT                   /protein_id="ACF04229.1"
FT                   /translation="MGNHISMCLSNSKASTNVKTNGSSIYPLQTGQHISIRTFRQLRAQ
FT                   QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY"
FT   gene            980..>1283
FT                   /gene="V2"
FT   CDS             980..>1283
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:B5ABL4"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABL4"
FT                   /protein_id="ACF04226.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQ"
FT   gene            1140..>1283
FT                   /gene="V1"
FT   CDS             1140..>1283
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:B5ABL5"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABL5"
FT                   /protein_id="ACF04227.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYR"
XX
SQ   Sequence 1283 BP; 353 A; 260 C; 270 G; 400 T; 0 other;
     tctgctatca ccttcaatta caatacttac gggtccccat ggccgcgcag cggaagacac        60
     gacgttctcg gcgacccatt cttcaagttc atctggaact tgattaaaag aagaagaaag       120
     aaatggagaa acataaactt ctagaggagg actaaaaatc ctatctaaat ttgaacttaa       180
     attatgaaat tgtaaaatat agtcttttgg ggccttctct ttcaatatat tgagggcctc       240
     ggatttactg cctgaattga gtgcttcggc atatgcgtcg ttggcagatt gctgacctcc       300
     tctagctgat ctgccatcga tttggaaaac tccaaaatca atgaagtctc cgtctttctc       360
     cacgtaggtc ttgacatctg ttgagctctt agctgcctga atgttcggat ggaaatgtgc       420
     tgacctgttt ggagaggata aatcgaagaa ccgttggttt ttacattggt acttgccttc       480
     gaattggata agcacatgga gatgtggttc cccattctcg tggaattctc tgcaaacttt       540
     gatgtatttt ttatttgttg gggtttctag gttttttaat tgggaaagtg cttcttcttt       600
     agagagagaa caattaggat aagtcaggaa ataatttttg gcatatattt taaataggcg       660
     aggcatggtg aaatgaatcg gtgtctctca aagctctatg gcaatcggtg tatcggtgtc       720
     ttatttatac ctagacacca aatggtattt ttgtaatttc gtaaaagtac attacaattc       780
     aaaattcaaa atttaaaaat caaatcatta aagcggccat ccgtataata ttaccggatg       840
     gccgcgcctt tccttactat gtggtcccca cgagggttct acagacgtca ctgtcaacca       900
     atcacattac atcctcaaac gttagataag tgttcatttg tctttatata cttggtcccc       960
     aagtattttg tcttgcaata tgtgggaccc acttctaaat gaatttcctg aatctgttca      1020
     cggatttcgt tgtatgttag ctattaaata tttgcagtcc gttgaggaaa cttacgagcc      1080
     taatacattg ggccacgatt taattaggga tcttatatct gttgtaaggg cccgtgatta      1140
     tgtcgaagcg accaggcgat ataatcattt ccacgcccgt ctcgaaggtt cgccgaaggc      1200
     tgaacttcga cagcccatac agcagccgtg ctgctgtccc cattgtccaa ggcacaaaca      1260
     agcgacgatc atggacgtac agg                                              1283
//