ID   EU834061; SV 1; linear; genomic DNA; STD; VRL; 1273 BP.
XX
AC   EU834061;
XX
DT   02-AUG-2008 (Rel. 96, Created)
DT   23-MAR-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Tomato yellow leaf curl virus isolate Ji replication-associated protein
DE   (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and precoat
DE   protein (V2) and coat protein (V1) genes, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1273
RX   DOI; 10.1007/s11262-008-0310-5.
RX   PUBMED; 19112612.
RA   Fazeli R., Heydarnejad J., Massumi H., Shaabanian M., Varsani A.;
RT   "Genetic diversity and distribution of tomato-infecting begomoviruses in
RT   Iran";
RL   Virus Genes 38(2):311-319(2009).
XX
RN   [2]
RP   1-1273
RA   Heydarnejad J., Fazeli R., Massumi H.;
RT   ;
RL   Submitted (17-JUN-2008) to the INSDC.
RL   Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman
RL   Ave, Kerman, Kerman 7616914111, Iran
XX
DR   MD5; 77bc53d926e654059b28c86ad6d31919.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1273
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="Ji"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Jiroft, Kerman"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:10832"
FT   gene            complement(<1..672)
FT                   /gene="C1"
FT   CDS             complement(<1..672)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /note="rep"
FT                   /db_xref="GOA:B5ABK0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABK0"
FT                   /protein_id="ACF04216.1"
FT                   /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR
FT                   ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSTHFHPNIQGAKSSSDVKTYM
FT                   EKDGDILDHGVFQVDGRSARGGCQSTNDAYAEAINAGSKAQALNILKEKAPRDFLLQFH
FT                   NLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIVIEGD
FT                   SR"
FT   gene            complement(222..515)
FT                   /gene="C4"
FT   CDS             complement(222..515)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABK1"
FT                   /protein_id="ACF04217.1"
FT                   /translation="MGLLTCMFSSNSKESSSARTIDSSTSPPQPGQHISIRTFRELKAQ
FT                   AMSKPTWRKTETSLIMEFSRSMEDQLEEVANLQTTHMPRQSTQGPKLRPSIY"
FT   gene            970..>1273
FT                   /gene="V2"
FT   CDS             970..>1273
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:B5ABK2"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABK2"
FT                   /protein_id="ACF04214.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQAPIMDVQ"
FT   gene            1130..>1273
FT                   /gene="V1"
FT   CDS             1130..>1273
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:B5ABK3"
FT                   /db_xref="UniProtKB/TrEMBL:B5ABK3"
FT                   /protein_id="ACF04215.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW
FT                   TYR"
XX
SQ   Sequence 1273 BP; 329 A; 265 C; 291 G; 388 T; 0 other;
     tctgctatca ccctcgatga caatactatt aggtctccat ggccgcgcag cggaagacat        60
     gacgttctct gacacccata cttcaagttc ctctggaact tgattaaaag aagaagataa       120
     aaatggagaa atataaggag ccggaggctc ctgaaaaatc ctatctaaat tactatttaa       180
     attatgaaat tggagtagaa agtctcttgg ggctttctcc tttagtatat tgagggcctg       240
     agctttggac cctgcgttga ttgcctcggc atatgcgtcg tttgtagatt ggcaacctcc       300
     tctagctgat cttccatcga cctggaaaac tccatgatca aggatgtctc cgtctttctc       360
     catgtaggtt ttgacatcgc ttgagctttt agctccctga atgttcggat ggaaatgtgt       420
     tgacctggtt ggggaggtga ggtcgaagaa tctattgttc ttgcactgga actttccttc       480
     gaattggatg agaacatgca agtgaggagt cccatcttcg tgaagctctc tgcagattct       540
     aatgaatttt ttggaagtgg gtgtttggag atttaataat tgggaaagtg cttcctcttt       600
     agtaagagag cacttgggat aagtgagaaa ataatttttg gcatttattt taaaccgatt       660
     gggggctgcc atgctggctt agtcaatcgg tgtctctcaa tttgctctat gtatcggtgt       720
     actggagtcc tatatatatg gagactctaa tggcattttg gtaatttggt aaaggtgcat       780
     tgcgattcaa aattcaaaat tcaaaaatca aatcattaaa gcggccatcc gtataatatt       840
     accggatggc cgcgccccca cgtgggtccc acacacgtcg ctatcatcca atcaaattga       900
     tgactgaaac gttagataat tgtttatttg tccttataaa cttagtcccc aagtttgttg       960
     tcttgcaata tgtgggatcc acttcttaat gaatttcctg aatccgttca cggatttcgt      1020
     tgtatgttag ctattaaata tttgcaggcc gttgaggaaa cgtatgagcc caacactttg      1080
     ggccacgatt taattaggga tcttatatct gttgttaggg ctcgtgacta tgtcgaagcg      1140
     acccggcgat ataatcattt ccacgcccgt ctcgaaggtt cgccgaaggc tgaacttcga      1200
     cagcccctac agcagccgtg ctgctgcccc cattgtccaa ggcataaaca agcgccgatc      1260
     atggacgtac agg                                                         1273
//