ID EU826137; SV 1; linear; genomic RNA; STD; VRL; 3100 BP. XX AC EU826137; XX DT 20-JUL-2008 (Rel. 96, Created) DT 11-APR-2025 (Rel. 144, Last updated, Version 2) XX DE Barfin flounder nervous necrosis virus strain BF93Hok segment RNA1, DE complete sequence. XX KW . XX OS Barfin flounder nervous necrosis virus OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Magsaviricetes; OC Nodamuvirales; Nodaviridae; Betanodavirus. XX RN [1] RP 1-3100 RA Nerland A.H., Oevergaard A.-C., Patel S., Nishizawa T.; RT "Complete sequence of RNA1 and RNA2 from the nodavirus strain BF93Hok RT isolated from barfin flounder, Verasper moseri at Hokkiado, Japan"; RL Unpublished. XX RN [2] RP 1-3100 RA Nerland A.H., Oevergaard A.-C., Patel S., Nishizawa T.; RT ; RL Submitted (13-JUN-2008) to the INSDC. RL Institute of Marine Research, PO 1870 Nordnes, Bergen 5817, Norway XX DR MD5; 471905df551038a59a1b0dc830915ca7. XX CC GenBank Accession Numbers EU826137-EU826138 represent the complete CC genome of Barfin flounder virus BF93Hok. XX FH Key Location/Qualifiers FH FT source 1..3100 FT /organism="Barfin flounder nervous necrosis virus" FT /segment="RNA1" FT /host="barfin flounder" FT /strain="BF93Hok" FT /mol_type="genomic RNA" FT /geo_loc_name="Japan" FT /db_xref="taxon:43761" FT CDS 79..3024 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="RdRp; protein A" FT /protein_id="ACF36168.1" FT /translation="MRSYEFHLARMTGATLCVVTGYRLLTSKWLADRIEDYRQRVIADR FT KKIIRDAAMIRTSIQKQMELVRISVRKGHSHQEAATERNSATETMLSVVEKSGYEPYII FT SPSPREAEYHGSRQFYSLADFRQDYRRDEITDRHIIVMTDVDYYVDMNELIGLGVPVLM FT YTFQPSTVSGEVKDGYFTITDNSVHYRVAGGKDVRHRIWNYNQDTMYTVSRPTGFWENL FT KRILRDITGITALCGFLYNKLGMAPFGDPVTMFTVDQFKMGEHRNIVSIVPFATCRSNL FT LKISEYGAELEYMRYQQRNNIANFNAVTYISEEGPLISLGLEGNFASVQLPLQDFENVR FT TAYELSKTNNLSDTVRRSGRPCKEAAIIHKCLQAECVLASEVVHKPGDLARHYQAVGSL FT YDVDPAEQGKCYAREYAPGPLTQTAVFPNESRSNERATIDGRIAGPQAKAKSREHITPR FT MRKVARDFVRHLVPKAGLGRPYPLTYVAEQQSKPLQRARNDANRYHDEFTMIVKAFQKK FT EAYNAPNYPRNISTVPHNQNVKLSSYTYAFKASTLQHVPWYMPTHTPAEIADAVQNLAA FT STTELVETDYSKFDGTFLRFMRECVEFAIYKRWVHLDHLAELSQLLANELQAPAVTRLG FT LKYDPDCSRLSGSALTTDGNSIANAFVSYLANRLAGMDDGEAWSWIGIVYGDDGLRSGN FT VSDTLLTDTASSLGFDLKIVNRAPRGSPVTFLARVYLDPWSSPASVQSPFRTLLKLHTT FT CDTQSEIEDIGWAKTQAYLVTDCKTPFIGHWCRAYQRNCTARVVQYADYNDIPFWVKND FT DHLGNSWPQSDSSDWNDVVANELGLTTAELLKHIALLEAYTGPTSGLPRLTTSIDLEPK FT MSVALDGEVQAGPSQQQTDKDGTNPTGDRSAPRRARTALPGVDGHTRCTRRSDRGPGER FT DANVRDKRPRRSMPPSRSVSSVPPPSSSGGGADGDRVEGAARPRRQRRNPV" FT misc_RNA 2730..3100 FT /note="subgenomic RNA3" FT CDS 2753..2980 FT /codon_start=1 FT /product="protein B2" FT /protein_id="ACF36169.1" FT /translation="MEQIQQAIDQHLVELEQLFQVLMDTRVALGGVTVVQVNEMRTFVI FT SAHAAACRLHVLSHRYPPPPVAGEEPMETE" XX SQ Sequence 3100 BP; 732 A; 893 C; 772 G; 703 T; 0 other; taacattatc tcttgctctg ttgagatatc acttacgcaa ggttaccgtt taagcataca 60 caacgacaag tgtaagccat gcgttcttac gagtttcacc tcgcccgcat gacaggagcg 120 acactttgtg ttgtcacggg ctaccgcctg ctgacatcca agtggctcgc ggatcggatt 180 gaggattatc gccaacgcgt cattgcggat cggaagaaga tcatccgcga cgctgcgatg 240 attcgcacca gtatccagaa gcagatggag ttagtgcgca tctctgtgcg caagggacat 300 tcccaccagg aggccgccac cgagcggaat agtgctactg aaaccatgtt gagcgttgtc 360 gagaagagtg gctatgagcc atacatcatt tctccatcgc ctcgtgaggc cgaataccac 420 ggatcacgtc agttctacag cctcgctgat ttccgccagg actatcgtcg tgacgaaatc 480 accgaccgcc acatcatagt gatgactgac gttgactact acgtggatat gaacgagttg 540 attggtcttg gtgttccagt actgatgtac acttttcaac ccagcacagt gtccggagag 600 gtcaaggatg gttactttac cattactgac aattccgttc actaccgtgt cgctggaggg 660 aaagatgttc gccatcgtat ttggaattac aaccaggata ccatgtatac cgtctctcgg 720 cccactggtt tctgggagaa tctcaagcgg attctccgtg acatcactgg catcaccgct 780 ttgtgcggct tcctctacaa caaactggga atggcgccct tcggcgaccc tgttacgatg 840 ttcaccgttg accagttcaa aatgggtgag caccgcaaca tcgtctctat cgttccattc 900 gcaacttgcc gttcaaacct cctgaaaatc agtgagtatg gtgcagagct ggagtacatg 960 cgctatcaac agcgcaacaa catcgcaaac ttcaacgctg tcacctacat ctcagaggag 1020 ggcccactca tcagcttggg cttggaaggc aatttcgcta gtgtgcaact cccacttcag 1080 gactttgaga acgtccgtac tgcatacgag ctgtctaaga ctaacaactt gtcagatact 1140 gttcgccgat cagggcgtcc gtgtaaggag gctgccatca tccacaagtg tctccaggct 1200 gaatgtgtcc tcgctagcga ggtagtacat aagcctggtg acctggcacg tcactaccaa 1260 gccgttggta gcctctacga cgtcgatccc gctgagcagg gcaagtgtta cgcccgtgag 1320 tacgctcccg gaccgctgac tcaaacagct gtgtttccaa atgagtctcg gtccaacgag 1380 cgtgccacga ttgacggccg cattgcaggt ccgcaagcta aggctaagag ccgtgagcac 1440 ataacaccta ggatgcgcaa agtggctagg gatttcgtgc gccatctggt gcccaaggcc 1500 ggtctcggcc gtccctaccc cctcacgtat gtcgcggagc agcaaagcaa gccattacag 1560 cgggctcgca acgatgctaa ccgatatcac gatgagttca ctatgatcgt caaggcgttc 1620 caaaagaaag aagcatacaa tgccccaaat tatccgcgga atatttcgac cgttccgcac 1680 aaccaaaatg tcaagctgtc cagctacacc tacgctttca aagctagtac tctccaacat 1740 gttccgtggt acatgccaac gcacacaccg gctgaaatag ccgacgcagt gcaaaacttg 1800 gctgccagta ccactgagtt ggttgagact gactacagca aattcgatgg cacattcttg 1860 cgctttatgc gtgagtgcgt cgagtttgca atctacaagc ggtgggtgca tctggaccac 1920 ttggccgagt tatctcaact attggcaaat gaactccagg ccccagctgt tacccgtctc 1980 ggtctaaagt atgaccctga ctgcagccgc ctcagcggct cggcactcac aactgacggt 2040 aacagcattg ctaacgcatt cgtctcctac ttggccaacc gattggctgg gatggacgat 2100 ggcgaagcat ggtcttggat tggcattgtt tacggtgacg atggtctccg ttccggcaac 2160 gtttcggaca ccctcctcac tgatactgct tcttcccttg gttttgactt gaaaatagtg 2220 aatcgcgcac ctcgcggctc tccagtgaca ttccttgcac gagtttacct cgatccctgg 2280 tcgtcaccgg cttctgtgca gtcaccattc cgcacgttgc taaagctaca tacgacctgc 2340 gacacccagt ctgagattga agacataggc tgggctaaga cgcaggcgta tctagtgact 2400 gattgcaaga caccgtttat tggccattgg tgtcgcgcat atcaacgcaa ctgcactgca 2460 cgcgtggtcc aatacgcaga ctacaacgac attccattct gggtcaagaa cgacgatcat 2520 ctcggcaatt cttggcccca atccgactct tcggattgga atgacgttgt agccaatgag 2580 ctcggcctta ccactgccga gctcctcaag cacattgcgc tgctcgaggc gtacaccgga 2640 ccaaccagtg gacttccccg cctgacaaca tcaattgatt tggaaccgaa gatgtctgtc 2700 gcattagacg gtgaggtcca agccggtcct agtcaacaac aaactgacaa ggatggaaca 2760 aatccaacag gcgatcgatc agcacctcgt cgagctcgaa cagctcttcc aggtgttgat 2820 ggacacacgc gttgcactcg gcggagtgac cgtggtccag gtgaacgaga tgcgaacgtt 2880 cgtgataagc gcccacgccg cagcatgccg ccttcacgtt ctgtctcatc ggtacccccc 2940 ccctccagta gcgggggagg agccgatgga gacagagtag aaggagctgc ccgtccgcgc 3000 agacaacgtc gcaatcccgt gtaggcagtc acctgcccgc tcccaccccc cccgggccta 3060 cgggccccct agtcagcttt acgctgtcat acgcttaggc 3100 //