ID EU822321; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC EU822321; XX DT 23-JUL-2008 (Rel. 96, Created) DT 03-MAR-2009 (Rel. 100, Last updated, Version 2) XX DE Kenaf leaf curl virus-[India:Kaisarganj:2007] clone KJLC segment DNA A, DE complete sequence. XX KW . XX OS Kenaf leaf curl virus-[India:Kaisarganj:2007] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Paul S., Ghosh R., Das S., Chaudhuri S., Ghosh S.K., Roy A.; RT "Characterization of a Begomovirus associated with leaf curl disease of RT kenaf (Hibiscus cannabinus) in Northern India"; RL Unpublished. XX RN [2] RP 1-2740 RA Paul S., Ghosh R., Das S., Chaudhuri S., Ghosh S.K., Roy A.; RT ; RL Submitted (13-JUN-2008) to the INSDC. RL Crop Protection, Central Research Institute for Jute and Allied Fibres, RL Barrackpore, Kolkata, West Bengal 700 120, India XX DR MD5; fbddd52584ae3c68dbb5b197a45fd511. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Kenaf leaf curl virus-[India:Kaisarganj:2007]" FT /segment="DNA A" FT /host="Hibiscus cannabinus" FT /mol_type="genomic DNA" FT /country="India:Kaisarganj" FT /collection_date="2007" FT /clone="KJLC" FT /db_xref="taxon:614074" FT gene 118..465 FT /gene="AV2" FT CDS 118..465 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:B5A7P3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B5A7P3" FT /protein_id="ACF42101.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQHLSEEYSPDTVGYDLIRDL FT ISILRSRNYVEASCRYRHFYPRVEGASASELRQPLCNPCSCPHCPRHKISHMGEQAHES FT QAQTVQDVQKP" FT gene complement(269..586) FT /gene="AC5" FT CDS complement(269..586) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B5A7P4" FT /protein_id="ACF42102.1" FT /translation="MSQPSTMSNITNTHDLTYMNYIMSRFKRLDLTWTLTPSWNIRASV FT HPVQSGLAIHGPVRPYARFCDADSGDNCTGCIRAVEVQTPTHLRRGGRNDDIGRTLRHN FT S" FT gene 278..1048 FT /gene="AV1" FT CDS 278..1048 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B5A7P5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B5A7P5" FT /protein_id="ACF42103.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRIWA FT NRPMNRKPRLYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTHGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKNENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1051..1455) FT /gene="AC3" FT CDS complement(1051..1455) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B5A7P6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5A7P6" FT /protein_id="ACF42104.1" FT /translation="MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILSHDNRPFTMNMDI FT IKIRIQFNYNLRRAVGVHKCFLTYRIWTTLHPQTGLFLRVFKTQVLKYLTNLGVISINS FT IIRAVNHVLWNKIEQTMYVEMTSEIKFDVY" FT gene complement(1148..1600) FT /gene="AC2" FT CDS complement(1148..1600) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:B5A7P7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5A7P7" FT /protein_id="ACF42105.1" FT /translation="MRSSSPSKDHCTQVPIKVQHREAKKRIRRRRVDLECGCSYFLSIN FT CFNHGFTHRGTHHCSSSMEWRLYLGSSKSPIFQDPQPRQPSIHDEHGHHQDQDPIQLQP FT SESCGSAQMFSDLPNLDDLTPSDWSFLKGIQNPSPQVSHKFGCNLN" FT gene complement(1497..2588) FT /gene="AC1" FT CDS complement(1497..2588) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:B5A7P8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5A7P8" FT /protein_id="ACF42106.1" FT /translation="MATPNRFKINAKNYFLTYPKCSLTKEEALSQFLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYM FT EKDGDILDHGVFQVDGRSARGGCQSANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH FT NLNSNLDRYFQDPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGD FT SRTGKTIWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFITLEGPL FT YSGSNQSTAQGSEEAHQEEESRS" FT gene complement(2138..2437) FT /gene="AC4" FT CDS complement(2138..2437) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5A7P9" FT /protein_id="ACF42107.1" FT /translation="MKMGLLTCMFSFSSKGSSSAETIDSSTSHLQAGQHISIQTFRELK FT AQAMSKPTWRKTETSLIMEFSRSMEDQLEEVANLPTTHMPRQSTQGPKLRPSIY" XX SQ Sequence 2740 BP; 720 A; 539 C; 636 G; 845 T; 0 other; accggatggc cgcgaaaaat tttgggtggg gccccgacca atgaaattgc gcgctcagag 60 cttaaataat tatcccgcgc ttataagtac ttcggctcta agtttctatt taaaaaaatg 120 tgggatccac tgttaaacga gttccccgag acggttcacg ggtttcgttg catgcttgct 180 atcaaatatc ttcaacatct gtctgaagaa tactctcctg atacggtagg ttacgattta 240 atccgcgatc taatatcaat attgcgttct aggaattatg tcgaagcgtc ctgccgatat 300 cgtcatttct acccccgcgt cgaaggtgcg tcggcgtctg aacttcgaca gcccttatgc 360 aacccgtgca gttgtcccca ctgtccgcgt cacaaaatct cgcatatggg cgaacaggcc 420 catgaatcgc aagcccagac tgtacaggat gtacagaagc cctgatgttc caagagggtg 480 tgagggtcca tgtaaggtcc agtcttttga atctagacat gatgtagttc atataggtaa 540 ggtcatgtgt attagtgatg ttactcatgg tactgggttg actcatagag ttgggaaacg 600 tttctgtgtc aagtcggttt atgtgttggg taagatctgg atggatgaaa atataaagtc 660 aaagaaccat actaacaatg tgatgttctt tctggttcgt gatcgacgtc cggttgacaa 720 gcctcaggat tttggagagg tcttcaacat gtttgacaac gagcctagca ctgctactgt 780 gaagaatgtg catcgggatc gttaccaagt cttgaggaaa tggtatgcaa cagtcactgg 840 tggacagtat ggtgcaaaag aacaagcttt agttaagaag tttgttaggg ttaataatta 900 tgttgtttac aatcaacaag aggcagggaa aaacgagaat cattctgaga atgccctgat 960 gttgtatatg gcatgtaccc atgcctctaa tcctgtttac gccactctta aaattaggat 1020 ttacttctac gattctgtaa cgaattgata ttaataaaca tcgaatttta tttctgaagt 1080 catctcgaca tacatagttt gttctatttt attccataat acatgattaa ctgctcttat 1140 aattgaatta attgagatta cacccaaatt tgtgagatac ttgaggactt gggttttgaa 1200 tacccttaag aaaagaccag tctgagggtg taaggtcgtc cagattcggt aagtcagaaa 1260 acatttgtgc actcccacag ctctccgaag gttgtaattg aattggatcc tgatcttgat 1320 gatgtccatg ttcatcgtga atggacggtt gtcgtggctg aggatcttga aatatagggg 1380 atttggaact tcccaaatat aggcgccact ccatgcttga gctgcagtga tgggttcccc 1440 tgtgcgtaaa tccatggttg aagcagttta tagatagaaa ataagaacac ccgcattcaa 1500 gatcgactct cctcctcctg atgcgcttct tcgcttccct gtgctgtact ttgattggaa 1560 cctgagtaca gtggtccttc gagggtgatg aagatcgcat tcttgagagc ccaattcttt 1620 aatgcggtgt tcttttcttc gtcgaggaat tctttataac tgctgttggg accaggattg 1680 cagaggaaga ttgtcggtat cccgccttta atttgaactg gtttcccgta ttttgtgttg 1740 gattgccagt ccctttgggc ccccataaac tctttaaagt gcttgaggaa atgcggatcg 1800 acgtcatcaa tgacgttaaa ccacgcgtcg ttgctgtaca cttttgggct tagatctaaa 1860 tgcccacata gatagttatg tgggcctaat gatctagccc atatcgtctt cccagtacga 1920 ctatctccct ctatgactat actttgaggt ctcaggggcc gcgcagcggc atcgacgaca 1980 ttctcgcagg cccactcttc aagttcttct ggaacttgat caaatgaaga agaagaaaaa 2040 ggagaaacat aaggagctgg tggatcctga aaatacctat ctaaatttga atttaaatta 2100 tgaaattgaa gtagaaagtc tcttggggct ttctccttta gtatattgag ggcctgagct 2160 ttggaccctg cgttgattgc ctcggcatat gcgtcgttgg cagattggca acctcctcta 2220 gctgatcttc catcgacctg gaaaactcca tgatcaagga tgtctccgtc tttctccatg 2280 taggttttga catcgcttga gcttttagct ccctgaatgt ttggatggaa atgtgctgac 2340 ctgcttggag atgtgaggtc gaagaatcta ttgtttctgc actggaactt cccttcgaac 2400 tgaatgagaa catgcaagtg aggagtccca tcttcatgaa gctctctgca gattctaatg 2460 aatttttttg aagttggggt ttggagattt aagaattggg aaagtgcctc ttctttagtg 2520 agtgagcatt tgggataagt gaggaaataa tttttggcat ttattttaaa cctattgggg 2580 gttgccatgt tgactgagtc aatcggtgtc tctcaatttg ctctatgtat tggtgtattg 2640 gagtcctata tatatggaga ctctaatggc ataattgtag taaaataaat ttaatttgaa 2700 attcaaatga aaaggctaaa gcggccatcc gtctaatatt 2740 //