Dbfetch
ID EU815935; SV 1; linear; genomic RNA; STD; VRL; 4065 BP. XX AC EU815935; XX DT 20-JAN-2009 (Rel. 99, Created) DT 20-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Grapevine leafroll-associated virus 5 putative HSP70h gene, partial cds; DE and putative HSP90h and putative coat protein genes, complete cds. XX KW . XX OS Grapevine leafroll-associated virus 5 OC Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus. XX RN [1] RP 1-4065 RX DOI; 10.1007/s11262-008-0294-1. RX PUBMED; 18953643. RA Gomez Talquenca S., Munoz C., Grau O., Gracia O.; RT "First description of Grapevine leafroll-associated virus 5 in Argentina RT and partial genome sequence"; RL Virus Genes 38(1):184-186(2009). XX RN [2] RP 1-4065 RA Gomez Talquenca S., Munoz C., Grau O., Gracia O.; RT ; RL Submitted (11-JUN-2008) to the INSDC. RL Laboratorio de Fitovirologia, EEA Mendoza INTA, San Martin 3853, Lujan de RL Cuyo, Mendoza 5507, Argentina XX DR MD5; 5b9b0e6f257caa07b0d8bb99c4088adc. XX FH Key Location/Qualifiers FH FT source 1..4065 FT /organism="Grapevine leafroll-associated virus 5" FT /host="Vitis vinifera cv Red Globe" FT /mol_type="genomic RNA" FT /country="Argentina" FT /collection_date="30-May-2006" FT /db_xref="taxon:71032" FT CDS <1..1557 FT /codon_start=1 FT /product="putative HSP70h" FT /note="similar to protein found in other ampeloviruses; FT identified by sequence comparison" FT /db_xref="GOA:B8R301" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:B8R301" FT /protein_id="ACJ03867.1" FT /translation="FSAGRGVEGCVPESDTIYIPTVVGIRKDGTYTIGLGALLEPDILV FT YRDIKRYFGMNKFNAESYKNKLQPKFEVIVKDWSVYIGPTSGEKGKARSVIALTCMFVS FT ALAKMATSMTGSAITLSVCSVPAEYSSYMRNFIFQGCTLAKVMVQAVVNEPTAAGLSAF FT VTVDKSSMEYMVVYDFGGGTFDASLMAVGSSYVCVVDSLGDNYLGGRDVDNALLDVVVN FT KLNISESSLDPFSMEALKIDMVDNPLSTTRRVLTKTGEVKTLRFDNRQFRDLCEPFVER FT ARVIIQRLLERNGVTSCVAVLIGGSSVLPGVRNSVASLKEISRVIFDKETYRAAVAIGA FT AIYAQTFTGVSRYRLIDCVSNSLSDERKPLQAVTVFPKGHPIPSTVAVNFKMPTYNTGV FT VLHEGESSFINENARTYSAPLKTSQFPGGKTYVNEFKISEDGRLDVTMDGVPLINEVVP FT EKPLDEEYSEVFLSSDDKRIKPEVNDIKLFYSKILNQPSLSTKDLASRREEYTKNGIVC FT D" FT CDS 1538..3157 FT /codon_start=1 FT /product="putative HSP90h" FT /note="similar to protein found in other ampeloviruses; FT identified by sequence comparison" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:B8R302" FT /protein_id="ACJ03866.1" FT /translation="MALSATSTYVPVSKSDEGFINLLRTFKGENDMDAFADEVLNYLNL FT RFSVISGRFSLGNYSCNTWYNGASGAVGAWPDSEGWGRHLLANYIVSNNTLAHLYYPLV FT SEIKSAVATPMSVFTDKLSRVGKPVTETSKFPFKVSRVEAENKAAEFGRPTKHTQDLIF FT RIGNYLGRLPTKDEVMGVTSLPVAAVRKGSLLLDVGSDVTSNERKLATLNLRGKNKQGD FT PVEGVFFKTRQTEIETVASFIFDNKIVKETLSLPGVQWTILSCLKKYPIYADSFEDRID FT GLVYVQAQARKLLDGLIPFKEDTDLDAALSSGTLLKGEVFRGDAKVLTPRFQRNTTGGL FT LMKIGSRFSISEYSELTRKLVGALLNRNLSLEVTYTQAVLILLQRYIHYRTNALRYVNL FT PAKLDYMIKNEVKQVDFSGVDEVFFKISRNYSGDRESVVCSPGGCGLYVLKDTGGPFAK FT WKDLQDVPAHMNFDFVGFVDPKLLSDHELKCQTRLLDRFRSKDTPVRGFLLGARKGNPV FT DYLASSAGIGGIEKAMVKKLIG" FT CDS 3248..4057 FT /codon_start=1 FT /product="putative coat protein" FT /note="CP; similar to protein found in other ampeloviruses; FT identified by sequence comparison" FT /db_xref="GOA:B8R303" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B8R303" FT /protein_id="ACJ03865.1" FT /translation="MSGSVQDVVPTLPANPPVSETEAERKAREDKEKADLEEIQSLPVI FT QGRTTVDTFEALINSSNGVLDLSRLELPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG FT ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS FT IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR FT LFGYDASLAAELGKMVAINKPSNSNRVTHNLYEDTRVAPDIFLGNRR" XX SQ Sequence 4065 BP; 1152 A; 770 C; 1047 G; 1096 T; 0 other; ttttctgctg gaagaggcgt tgaaggttgc gttcccgaga gcgacacgat ctatataccg 60 actgtggttg gtatcagaaa agatggaact tacacaatag gcctgggagc tttgttagaa 120 ccggacatat tagtgtaccg agatataaaa agatattttg gtatgaacaa gttcaatgcc 180 gagagctaca agaacaagct acagcccaag ttcgaggtga tagtgaaaga ttggtcggtt 240 tacattggac ccacctctgg agagaaaggg aaggctagga gcgtcatagc tctgacctgt 300 atgttcgtgt cagccttagc gaagatggca acttctatga ctgggagtgc cataaccctg 360 tccgtttgtt ctgtgccagc tgaatatagc tcttatatga gaaatttcat ctttcaaggc 420 tgtactctgg ctaaagtgat ggttcaagct gttgtgaatg aaccaactgc tgctgggttg 480 agtgctttcg tcactgtcga caaaagttcg atggagtaca tggtagttta cgacttcgga 540 ggaggtactt tcgatgcctc tttgatggcc gttgggtcat cctatgtttg tgtcgttgac 600 tccctggggg acaactatct gggagggaga gatgttgaca atgctcttct ggatgtggtt 660 gtcaacaaac tcaacataag tgaaagctcg ttagaccctt tttccatgga ggccttgaaa 720 atagacatgg tggacaaccc tctttcaact accagaaggg tgttgacaaa aacaggggag 780 gtgaaaacac tgcggtttga taaccgacaa ttcagagacc tgtgtgaacc ttttgtagaa 840 agggcgagag taataataca gagattgctg gaacggaatg gtgtcaccag ctgtgtggct 900 gtgctgatag gaggttcatc agtgttacct ggtgtgagaa attccgtggc tagcctgaag 960 gaaatatcca gggtgatatt cgataaagag acttacagag cagcggtagc tataggggcg 1020 gccatatacg ctcagacttt tactggtgtc tctagatata ggctaataga ctgtgtgtct 1080 aacagcttat ctgatgaaag gaagccgttg caggcagtaa ctgttttccc aaaagggcat 1140 ccgataccgt ctactgtggc agtgaatttc aaaatgccta cttacaacac cggtgtggtg 1200 ttgcatgaag gtgaatcctc attcataaat gagaacgcaa ggacgtattc ggcacctttg 1260 aaaacatctc agttccccgg cggaaaaact tatgttaatg agttcaaaat ttcggaggac 1320 ggtagactgg atgtgaccat ggacggcgtg cccttaatca atgaagtagt gcctgagaaa 1380 cctttggacg aagaatactc agaagttttt ctgagttctg atgataaaag aatcaaacct 1440 gaggtcaatg atataaaact gttttactcc aaaatcttga accaaccatc tttaagtact 1500 aaagacttgg catcacggag agaggagtac actaagaatg gcattgtctg cgactagcac 1560 ctacgttccg gtgtcgaaga gcgatgaagg gttcattaat ttgctgagaa cgttcaaagg 1620 tgaaaacgat atggatgcgt ttgccgatga agttttaaat tatttaaatt taaggttttc 1680 tgttatttct ggtagatttt ccttaggtaa ttattcttgt aacacctggt acaatggtgc 1740 ttccggagcc gttggtgctt ggccggactc cgaagggtgg ggtcgtcatc tgttggcaaa 1800 ctacatcgtt tctaacaaca cactcgcaca tctttactat cctttggtga gtgagataaa 1860 atctgcagtg gctactccca tgtctgtgtt tacagacaaa ttgagtaggg ttggcaaacc 1920 agtcaccgag acatctaagt ttccttttaa ggtgtcaaga gttgaagctg agaataaagc 1980 ggctgagttc ggaaggccaa cgaaacatac ccaagacctg atatttcgta tcgggaatta 2040 tttgggaagg ttaccaacta aggatgaagt aatgggtgtg acgtcattgc ctgtagcggc 2100 tgtgcggaag ggtagtttgc ttctggacgt tggttcagat gtgacttcaa atgagaggaa 2160 actggctact ctaaatttga gaggaaagaa caaacaagga gatccggtgg agggagtgtt 2220 cttcaagacg agacaaacag aaatagagac cgttgcgtct tttatttttg ataataaaat 2280 cgttaaggag accttatccc ttcccggagt gcaatggaca atactgagtt gcctcaaaaa 2340 gtatccaatt tatgctgact catttgaaga ccgcatagac ggtttggtgt acgtgcaagc 2400 tcaagccaga aaacttttgg acggtttgat accattcaaa gaagacacag acttagacgc 2460 agcactcagc tctggcactc tgttgaaagg ggaggtattc agaggggacg ccaaggtttt 2520 gactcctagg ttccaaagaa acaccacagg cgggttgtta atgaagatag gctcaagatt 2580 ttctatttcg gaatattcgg agctgacaag gaagctggtt ggcgcactcc tgaacagaaa 2640 tctttctttg gaggtgacat acactcaagc agttttaata ttgttacaga gatatataca 2700 ttacagaact aatgctttga ggtatgtgaa tctgcccgct aaattagact atatgataaa 2760 aaatgaagtc aagcaggtgg atttctccgg tgtggatgag gtgtttttca aaatatcaag 2820 gaactattcc ggagatagag agagcgtggt gtgctcccct ggcggatgtg gcttatatgt 2880 tttgaaggat actggcggtc catttgccaa gtggaaggat ttgcaagatg ttcctgcaca 2940 tatgaatttc gacttcgtgg gttttgtcga cccgaagtta ctgtctgacc atgagttgaa 3000 gtgtcaaaca cgactgctgg ataggtttag gtcaaaagat accccggtta ggggttttct 3060 tttgggtgcg agaaaaggaa atccggtaga ttaccttgcc agttccgccg gtatcggcgg 3120 aatcgaaaag gcaatggtca agaaacttat agggtaaatg gtctacactc agtgagtgta 3180 atgtgtttca ttttatttaa gctacccttt tcttgttttg tgatttagac tcttcatata 3240 ggaacagatg tctggatcag tgcaggacgt tgttccgaca ttaccggcaa acccaccagt 3300 tagcgagaca gaggccgagc ggaaggctag agaagataag gagaaggccg acttggagga 3360 gatacagtcc cttcccgtga tacaaggtag gacaaccgtg gacacttttg aagcgctaat 3420 caatagctcg aacggtgtgc tagacttgtc taggctggag cttcctaggc tgtttaacgt 3480 cacaatacct ggcgttgtat caggtaaaca taaagtgatt ggggcgagag ctctctggaa 3540 cttggggaaa tcaaaaggga tatctgagag tgataagcat caagtacaat tcttgatgca 3600 atcctttcag gatttcataa cgcactcaac atctcctaag gtgtccagct cttccaatcg 3660 gacaataact ggtaagtatg atggtaagga ggtgacagtt gcccacgatg aaataaagac 3720 agctctagac aattctatag ggtctttcgg ttacgaaaac actcctagac aatttggaag 3780 agcattcacg gcagcgatag tgcaagggat atcctcaggc aaactggagg tgaacacaaa 3840 gatatgtgct tctcacggtg taccgcctaa ctactatcct tactcgccgg attgtctgca 3900 tgttgatgcg agactattcg gctatgatgc ttcactggcg gctgagttag gtaagatggt 3960 tgctatcaac aaaccttcca acagcaacag agttacacac aatctgtacg aagacaccag 4020 ggtggctcca gacatcttct tgggtaacag gaggtgaagt ctgaa 4065 //