Dbfetch
ID EU798996; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC EU798996; XX DT 18-AUG-2008 (Rel. 96, Created) DT 18-AUG-2008 (Rel. 96, Last updated, Version 1) XX DE Jatropha leaf curl virus segment DNA A, complete sequence. XX KW . XX OS Jatropha leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Pal A., Mukherjee S.; RT ; RL Submitted (06-JUN-2008) to the INSDC. RL Plant Molecular Biology, International Center For Genetic Engineering And RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; 194a16abf30d16b2032ef6ec27523e38. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="Jatropha leaf curl virus" FT /segment="DNA A" FT /host="Jatropha" FT /isolate="New Delhi" FT /mol_type="genomic DNA" FT /country="India" FT /db_xref="taxon:543876" FT CDS 143..496 FT /codon_start=1 FT /product="precoat protein" FT /note="AV2" FT /db_xref="GOA:B5A466" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:B5A466" FT /protein_id="ACG69440.1" FT /translation="MWDPLTNEFPETLHGFRCMLAVKYLQALLSSYAPDTVGYEYLRDL FT ISVLRCRDYGKASIRYGRIVAAKNNTPETELRESLPSHCQCRHCPRHGIQKEGVDVATS FT KPKTVDIPEKESS" FT CDS 303..1079 FT /codon_start=1 FT /product="coat protein" FT /note="AV1" FT /db_xref="GOA:B5A467" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B5A467" FT /protein_id="ACG69441.1" FT /translation="MAKRLFDMVGSSPLRITRRKLNFGSPSRLIASAVTAPDMGFKRRA FT WTWRPANRKPWIYRRRRAPDVPRGCEGPCKVQSFEKRHDVTHTGGVLCISDVTRGNGIT FT HRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFWLVRDRRPFGSPMDLGQVFNMYDN FT EPSTATIKNDLRDRYQVLHKWHASVTGGVYASKEQAIIKKFYRVNNYVVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1076..1474) FT /codon_start=1 FT /product="AC3" FT /note="replication enhancer protein" FT /db_xref="GOA:B5A468" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5A468" FT /protein_id="ACG69442.1" FT /translation="MDSRTGEPITAARFNNGVFIWTVPNPLYFRVISHMSRPFNLDQDI FT IHLRIQFNHNLRQALQIHKCFLSFKVWTRSRIQTGMFLRVFKTQVIRYLDRLGVISINL FT VIKAVDHVLYNVLHHTMQVEQSNEIMFN" FT CDS complement(1215..1613) FT /codon_start=1 FT /product="AC2" FT /db_xref="GOA:B5A469" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5A469" FT /protein_id="ACG69443.1" FT /translation="MSCSTATVPLQLLSRDARGDRSGGDKAEEDRLEVRMFIFSLANCA FT NHGFTHRGTHHCSSFQQWRLYLDGPKSSVLPRHQSHEQTLQPGPGHHTPPNTIQSQSQA FT STTDTQVLPELQSLDSFTDSDWDVLTSL" FT CDS complement(1537..2601) FT /codon_start=1 FT /product="AC1" FT /note="rep protein" FT /db_xref="GOA:B5A470" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5A470" FT /protein_id="ACG69444.1" FT /translation="MPRVNAFSVSAKNIFLTYPKCPLSKETVLDLLRNISCPSDKLFIR FT VAQEKHEDGSLHIHALIQFKGKARFRNARHFDLIHPHSSSQFHPNIQGAKSSSDVKSYI FT EKDGDFIDWGFFQIDGRSARGGQQTANDAAAEALNSGSAEAALAISVKMPRDYIFQYHN FT LKSNLEREIFTPLRVDYVSPYPLCSFDRVPEELEIWASENIVSPAARPFRPISIVLEGD FT SRIGKTMWARSLGPHNYLCGHLDLSPRVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQVKGGIPTIFLCNPGPHSSYKEYLDEDRNAALKNWAVKNVVFDSDSPPP FT APFKRRQRRQIRGG" FT CDS complement(2187..2426) FT /codon_start=1 FT /product="AC4" FT /db_xref="UniProtKB/TrEMBL:B5A471" FT /protein_id="ACG69445.1" FT /translation="MPLSSSRVRPDSEMQDISISSILIAPPNSIQISRELSPPLMLSPI FT SRRTEISSTGGSFRSMEDLLEEVNRQLMMLQRRP" XX SQ Sequence 2743 BP; 781 A; 617 C; 638 G; 707 T; 0 other; accggatggc cgcgattttt tttaacgtgg accccacaac tgacaaacag acaaagaaaa 60 gaaaagggaa cccagcacaa agagaaaaaa actaacgtcc cgcgcgctat aaaacttgct 120 ggcgaaggag tagagccgca acatgtggga tccattaacc aacgagtttc ccgaaaccct 180 gcacgggttt cgctgtatgc ttgcagtcaa atatctacaa gctctactct cttcgtacgc 240 tcctgatacg gtcggatacg agtaccttcg tgatctgatc agcgtactac gctgtcgcga 300 ctatggcaaa gcgtctattc gatatggtcg gatcgtcgcc gctaagaata acacgccgga 360 aactgaactt cgggagtccc tcccgtctca ttgccagtgc cgtcactgcc ccagacatgg 420 gattcaaaag gagggcgtgg acgtggcgac cagcaaaccg aaaaccgtgg atataccgga 480 gaaggagagc tcctgatgtg ccgcgtggat gcgagggacc atgcaaagta cagtcattcg 540 aaaagagaca tgatgtcacg cacacggggg gcgttctatg tatatctgac gtcacacgcg 600 gcaatggtat cacgcataga gtgggtaaga gattctgcgt gaaatccgtc tatgtacttg 660 gcaagatttg gatggacgag aacatcaaga cgaagaacca tactaacagc gtgatattct 720 ggctggtcag agacaggcgt ccatttggca gtccaatgga cctgggccaa gtctttaaca 780 tgtatgataa cgagcccagt acagccacta tcaagaacga tttgagggat agatatcaag 840 tgttacacaa atggcacgcg tcggttactg gtggtgtcta tgcgtctaag gaacaagcta 900 taatcaagaa gttctacaga gtcaataatt atgtggtcta caatcaccag gaagccgcga 960 aatacgaaaa ccatactgag aatgcgttat tattgtacat ggcatgtacg catgcatcaa 1020 atccagtgta tgcaacattg aaaatacgca tatatttcta cgactcagta tcaaattaat 1080 taaacattat ttcattgctc tgttcaacct gcatcgtatg atgcagtaca ttatacaata 1140 catgatctac agctttaatt acaagattaa tagaaattac acctaatcta tctaaatatc 1200 taataacttg agtcttaaag actcgtaaga acatcccagt ctgaatccgt gaacgagtcc 1260 agactttgaa gctcaggaag cacttgtgta tctgtagtgc ttgcctgaga ttgtgattga 1320 attgtattcg gaggtgtatg atgtcctggt ccaggttgaa gggtctgctc atgtgactga 1380 tgacgcggaa gtacagagga tttgggaccg tccagataaa gacgccattg ttgaaacgag 1440 ctgcagtgat gggttcccct gtgcgtgaat ccatgattcg cgcagttagc gagagaaaat 1500 atgaacatcc gcacttcaag tcgatcctcc tccgccttat ccccccctga tctgtcgcct 1560 ctggcgtctc ttgaaaggag ctggaggggg actgtcgctg tcgaacacga cattcttaac 1620 agcccagttc tttaatgctg cgttcctatc ttcgtctaaa tactctttat agctcgaatg 1680 gggcccagga ttgcagagga agattgtcgg aatgcctcct ttaacttgaa cgggctttcc 1740 atactttgtg ttgctttgcc agtctctctg ggcccccata aattccttga agtgcttgag 1800 ataatgcgga tcaacatcat caatgacgtt ataccatacg tcattactat agactcttgg 1860 actgagatcc aagtgaccgc ataaataatt gtgtgggccg agagaccgag cccacattgt 1920 cttcccaata cgactatcac cctctaaaac aatacttatg ggtctaaaag gccgcgcagc 1980 gggactgaca atattttctg aggcccaaat ctcgagttct tctggaactc gatcaaacga 2040 acaaagagga taaggagaaa cataatctac tctaagaggt gtaaatatct ccctctctag 2100 attggacttt aaattatgat actgaaaaat ataatctctg ggcatcttca cggatatagc 2160 tagagcagct tctgcagacc cagagtttaa ggcctccgct gcagcatcat tagctgtctg 2220 ttgacctcct ctagcagatc ttccatcgat ctgaaagaac ccccagtcga tgaaatctcc 2280 gtccttctcg atataggact taacatcaga ggaggactta gctccctgga tatttggatg 2340 gaattgggag gagctatgag gatggatgag atcgaaatgt cttgcatttc tgaatctggc 2400 cttacccttg aactggataa gggcatggat atgcagtgac ccatcctcgt gtttctcctg 2460 cgcgactcta ataaataatt tatcagaagg acaggatatg tttcgcagga gatccaagac 2520 tgtctccttg gataatgggc atttgggata agtgaggaat atgtttttag cgctaactga 2580 aaatgcgtta acacgaggca ttttaaacag agggtattgg ggacgctgta aaactctcta 2640 caattgggga cttgggggac gcatttatac cagtgtcccc aaatggcacg cttgtaattt 2700 ttgtgaaaat cccctgtcca acagcggcca tccgattaat att 2743 //