ID   EU797177; SV 1; linear; genomic RNA; STD; VRL; 1173 BP.
XX
AC   EU797177;
XX
DT   03-NOV-2008 (Rel. 97, Created)
DT   18-JUN-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Pepino mosaic virus isolate PepMV-Can1 RNA dependent RNA polymerase (RdRp)
DE   gene, partial cds; triple gene block 1 protein (TGB1) and triple gene block
DE   2 protein (TGB2) genes, complete cds; and triple gene block 3 protein
DE   (TGB3) gene, partial cds.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1173
RX   DOI; 10.1094/PDIS-92-11-1590C.
RX   AGRICOLA; IND44149007.
RA   Alfaro-Fernandez A., Cebrian M.C., Cordoba-Selles C., Herrera-Vasquez J.A.,
RA   Jorda C.;
RT   "First Report of the US1 Strain of Pepino mosaic virus in Tomato in the
RT   Canary Islands, Spain";
RL   Plant Dis. 92(11):1590-1590(2008).
XX
RN   [2]
RP   1-1173
RA   Alfaro-Fernandez A., Cebrian M.C., Cordoba-Selles C., Herrera-Vasquez J.A.,
RA   Jorda C.;
RT   ;
RL   Submitted (06-JUN-2008) to the INSDC.
RL   IAM, UPV, Camino de Vera s/n, Valencia 46022, Spain
XX
DR   MD5; db03f0e0b148ea6f39c9378e8662b743.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1173
FT                   /organism="Pepino mosaic virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="PepMV-Can1"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /db_xref="taxon:112229"
FT   gene            <1..49
FT                   /gene="RdRp"
FT   CDS             <1..49
FT                   /codon_start=2
FT                   /gene="RdRp"
FT                   /product="RNA dependent RNA polymerase"
FT                   /note="ORF 1"
FT                   /db_xref="UniProtKB/TrEMBL:B6SD88"
FT                   /protein_id="ACI46621.1"
FT                   /translation="EAMRLGEKSPPKATH"
FT   gene            74..778
FT                   /gene="TGB1"
FT   CDS             74..778
FT                   /codon_start=1
FT                   /gene="TGB1"
FT                   /product="triple gene block 1 protein"
FT                   /note="ORF 2"
FT                   /db_xref="GOA:B6SD89"
FT                   /db_xref="InterPro:IPR027351"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:B6SD89"
FT                   /protein_id="ACI46622.1"
FT                   /translation="MERSTLINLLQLHHFEPKLSVEGVIVVHGIAGTGKTTLLRTLFSA
FT                   YPNLVIGSPRPCYLDKANKISQVCLSCFPNTLCDIVDEYHLLESYQEPTLALFGDPCQC
FT                   TFIERLRIPHYTSFRTHRFGKSTAELLNKLFQLQIVSVKQEDDIVEFFDPFQVDPTENI
FT                   SASEEEVLEFVSDQVVTTSSEELAGLEFTETTFYCTTLAAAVTGNPGRTFISLTRHTQR
FT                   LTIGELNARIDS"
FT   gene            759..1130
FT                   /gene="TGB2"
FT   CDS             759..1130
FT                   /codon_start=1
FT                   /gene="TGB2"
FT                   /product="triple gene block 2 protein"
FT                   /note="ORF 3"
FT                   /db_xref="GOA:B6SD90"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:B6SD90"
FT                   /protein_id="ACI46623.1"
FT                   /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT                   PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSVSRATHQH
FT                   SCYNTHSAANTTPPLSGHH"
FT   gene            982..>1173
FT                   /gene="TGB3"
FT   CDS             982..>1173
FT                   /codon_start=1
FT                   /gene="TGB3"
FT                   /product="triple gene block 3 protein"
FT                   /note="ORF 4"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:B6SD91"
FT                   /protein_id="ACI46624.1"
FT                   /translation="MSSYSSSFLHWVSSSPINLVLALAVLLTSILATIHILQPTQHHHC
FT                   QVIIDGAAIVVTNCENTPE"
XX
SQ   Sequence 1173 BP; 353 A; 273 C; 202 G; 345 T; 0 other;
     tgaagccatg agacttgggg agaagagccc cccaaaagca acacattgac gggttaagtt        60
     tcccctgttc gaaatggaaa gatccactct aataaattta cttcaactgc accactttga       120
     acctaaactc agcgttgaag gagttattgt tgtacacgga atcgctggaa cagggaaaac       180
     taccctactt agaactttat tttccgctta cccgaactta gtcataggat cacctaggcc       240
     ttgttattta gataaagcta ataaaatttc acaagtttgt ttatcttgct ttccaaacac       300
     cctttgtgat attgtcgatg agtaccatct tctagaaagt taccaagaac ctactttagc       360
     tttgtttgga gacccttgtc agtgtacttt cattgaaaga cttagaattc cacactacac       420
     ttccttcaga acacatagat ttggcaagtc tactgcagag cttttaaaca agttgtttca       480
     acttcaaatt gtctctgtaa aacaagaaga cgacatagtt gaattctttg acccatttca       540
     ggtagaccca actgaaaata tttcagcatc tgaggaagaa gttttggaat ttgtctctga       600
     tcaagtggtg acaaccagct ctgaagaatt agcaggattg gagttcactg aaaccacttt       660
     ctactgcact acactagctg cagcagtcac tggaaatcct ggcagaactt tcatctcctt       720
     aaccagacac actcagagac tcaccattgg cgaactaaat gccaggattg actcctagag       780
     ctgacctcac tgacacctac aagataattg ctattgcttt tttgttgtca gcttgcattt       840
     acttccaaaa cagtcattac caacctgttg ctggagacaa tctgcataga ttgccatttg       900
     gtggccagta tcaagacggc actaagaaga tatcatattt tcctcagcaa caatcatact       960
     ttcactctgg taacaaatta aatgtcctca tactcatctt cattcttaca ttgggtatcg      1020
     tcctcaccaa taaatttagt tttagcgtta gccgtgctac tcaccagcat tcttgctaca      1080
     atacacattc tgcagccaac acaacaccac cattgtcagg tcatcattga cggagctgcc      1140
     atagttgtta ctaattgtga aaacacgcct gaa                                   1173
//