ID   EU796090; SV 1; linear; genomic RNA; STD; VRL; 2214 BP.
XX
AC   EU796090;
XX
DT   16-JUL-2008 (Rel. 96, Created)
DT   30-JUL-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Raspberry bushy dwarf virus isolate CmGR-2 segment RNA2, complete sequence.
XX
KW   .
XX
OS   Raspberry bushy dwarf virus
OC   Viruses; Riboviria; Idaeovirus.
XX
RN   [1]
RP   1-2214
RX   DOI; 10.1007/s10658-008-9362-6.
RX   AGRICOLA; IND44160414.
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   "Biological, serological and molecular characterisation of Raspberry bushy
RT   dwarf virus from grapevine and its detection in the nematode Longidorus
RT   juvenilis";
RL   Eur. J. Plant Pathol. 123(3):261-268(2009).
XX
RN   [2]
RP   1-2214
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   ;
RL   Submitted (06-JUN-2008) to the INSDC.
RL   Plant Pathology, Agricultural Institute of Slovenia, Hacquetova 17,
RL   Ljubljana SI-1000, Slovenia
XX
DR   MD5; 50e328e0661add8fb55bc3c7f4348bbb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Raspberry bushy dwarf virus"
FT                   /segment="RNA2"
FT                   /host="grapevine"
FT                   /isolate="CmGR-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Slovenia"
FT                   /db_xref="taxon:12451"
FT   CDS             117..1193
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2K0"
FT                   /protein_id="ACF33431.1"
FT                   /translation="MFSRSSSTRSSFVGSRGGSIFGGESVKKSSTVRGFSAGLERSRGL
FT                   PSASAGENQISLPGLRIPVKTSSQPGNYYLNERGIDLPIVQQQKFLAVDGKEMGECYLL
FT                   DTSRTDLLDAAKTALNESNLLEFNKFKEFKKYKGKNNEFSLVEASVFDKLIRKDDSPIH
FT                   LNRLLIAVVPAVGKGTPGTARIKIRDARLDDGYGDLFSSENRVDSGYVYCINVGYSVPK
FT                   SEIDYKINIDFAGVPIKDGKSPIWVKAAFLLASGPPVFFDGTMSLGAEILPDSHKELLG
FT                   TSALLLNEANSNRKSFSGDDGELRRDYPYKRFEEISPLDSISQVDTTSQDSINEVNTEN
FT                   AQNGTGEVYLAPPSHSVY"
FT   CDS             1312..2136
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B5A2K1"
FT                   /db_xref="InterPro:IPR009516"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2K1"
FT                   /protein_id="ACF33432.1"
FT                   /translation="MSKKAVPPIVKAQYELYNRKLNRAIKVSGNQKKLDASFVGFSEGS
FT                   NPETGKPHADMSMSAKVKRVNTWLKNFDREYWDNQFASKPIPRPVKQVLKGSSSKSQYR
FT                   DEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLKYKEDENVVEVSFNDLAAQKAGDKLV
FT                   SILLEINVVGGAVDDKGRVAVLEKDASVTVDYLLGSPYETINLVSGLNKINFRSMTDVV
FT                   DSIPSLLNERKVCVFQNDDSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT"
XX
SQ   Sequence 2214 BP; 614 A; 429 C; 517 G; 654 T; 0 other;
     ctggacatct cgagtttgct ctttggtggt cattgagtat cgaatttagt gtctgattct        60
     cattctttta aaaaaaaaaa aaaaaagtaa aatatatcct tggtgactgt gtcatcatgt       120
     ttagcagaag ttcctctact cgcagctcct ttgtggggag caggggtggt tccatttttg       180
     gaggggaatc tgttaagaag tctagtactg tgagggggtt ctctgctggt cttgaaagat       240
     cacgaggatt accttccgcc agcgctggtg aaaaccagat ctcgttgccg gggcttagga       300
     tcccagttaa gacttcttca caaccgggaa attactacct taatgagaga ggtattgatt       360
     tgccaattgt gcaacagcag aagtttctgg ccgttgacgg caaagaaatg ggggagtgtt       420
     accttttgga cacttctcga actgatctgt tggacgccgc taaaacagcg ttaaatgaat       480
     ctaatcttct tgaattcaac aagtttaagg aatttaagaa gtataaggga aagaacaacg       540
     aattctcttt ggttgaggca tcagttttcg acaaactgat caggaaggac gattctccca       600
     tacaccttaa caggctttta atagctgttg tgcctgccgt aggaaaagga acaccaggaa       660
     ccgcacgaat taaaattcgt gacgcgcgcc tggatgatgg ttatggtgat ctttttagtt       720
     ctgaaaatcg tgtggactct ggctacgttt attgtataaa tgtaggttat tctgttccca       780
     agtctgaaat cgattacaaa atcaatattg attttgccgg ggtacccatc aaagatggta       840
     aatccccgat ttgggtcaaa gctgctttcc ttttggctag tggcccccct gtgttctttg       900
     atggaacaat gagcttgggt gctgagattt tgcccgactc tcacaaagag ttgttgggca       960
     cctctgcttt gttgttgaat gaggcgaatt ccaataggaa gtcgttctct ggagatgacg      1020
     gagagcttag aagggattat ccctataagc gttttgagga aatttcacct ttggattcta      1080
     taagtcaggt cgatacgacc agtcaagact ccattaatga ggtgaacacc gaaaatgctc      1140
     aaaacggtac tggtgaggtg tatttggcac ctccttcaca ttccgtttat taataactta      1200
     gttgttaatg cattgaatgc atatgacaca tagtgtcaat tttgtggtta aaaaattttc      1260
     taaccgcatt atatttcatt attgaattaa tactaagtat ttaagttttc aatgtcgaag      1320
     aaagctgttc caccaatcgt taaggctcaa tacgagcttt ataatcgtaa gttgaacaga      1380
     gccatcaagg tttccggcaa tcaaaagaag ctagacgctt cttttgtcgg gttcagtgaa      1440
     ggctctaacc cagaaactgg gaaacctcac gcggacatgt ctatgtccgc taaggttaag      1500
     cgcgttaata cgtggcttaa aaactttgat cgcgaatact gggataacca attcgcatca      1560
     aaacccattc ctagacctgt aaaacaggtc ttgaagggtt catcctctaa gtctcaatac      1620
     cgagatgaag gagaggtggt ctttacccga aaagactccc aaaaatccgt taggactgtg      1680
     tcctattggg tttgtactcc tgagaagtca atgaaacctc tcaaatacaa ggaggacgaa      1740
     aacgtcgttg aagttagttt caatgacctc gcagcccaaa aggctggtga caaattggtt      1800
     tccatcctgt tggaaatcaa tgtggtgggc ggtgccgtcg acgataaggg tcgagtggct      1860
     gtcctggaaa aggatgcttc tgtgacggtt gattaccttc tcggaagccc gtatgaaacc      1920
     ataaatcttg tttcgggttt aaacaagata aattttagat ccatgacgga tgtggttgac      1980
     tccataccgt cgctcttgaa tgagcgtaag gtgtgtgtct tccagaatga cgatagttcg      2040
     tcattttaca ttcgaaaatg ggctaacttc cttcaggaag tttcggcagt tttaccggta      2100
     ggaaccggta aatcttccac aatagttcta acttagttcg gactatttgc ctgctagtgg      2160
     gcatatctca caatttgtga gataaacggc atagccgttg tttgctgagc aaac            2214
//