ID   EU796087; SV 1; linear; genomic RNA; STD; VRL; 2205 BP.
XX
AC   EU796087;
XX
DT   16-JUL-2008 (Rel. 96, Created)
DT   30-JUL-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Raspberry bushy dwarf virus isolate GR-2 segment RNA2, complete sequence.
XX
KW   .
XX
OS   Raspberry bushy dwarf virus
OC   Viruses; Riboviria; Idaeovirus.
XX
RN   [1]
RP   1-2205
RX   DOI; 10.1007/s10658-008-9362-6.
RX   AGRICOLA; IND44160414.
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   "Biological, serological and molecular characterisation of Raspberry bushy
RT   dwarf virus from grapevine and its detection in the nematode Longidorus
RT   juvenilis";
RL   Eur. J. Plant Pathol. 123(3):261-268(2009).
XX
RN   [2]
RP   1-2205
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   ;
RL   Submitted (06-JUN-2008) to the INSDC.
RL   Plant Pathology, Agricultural Institute of Slovenia, Hacquetova 17,
RL   Ljubljana SI-1000, Slovenia
XX
DR   MD5; 5e1c34ebe2f0406b9fd5c80c4dd3ace4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2205
FT                   /organism="Raspberry bushy dwarf virus"
FT                   /segment="RNA2"
FT                   /host="grapevine"
FT                   /isolate="GR-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Slovenia"
FT                   /db_xref="taxon:12451"
FT   CDS             108..1184
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2K0"
FT                   /protein_id="ACF33425.1"
FT                   /translation="MFSRSSSTRSSFVGSRGGSIFGGESVKKSSTVRGFSAGLERSRGL
FT                   PSASAGENQISLPGLRIPVKTSSQPGNYYLNERGIDLPIVQQQKFLAVDGKEMGECYLL
FT                   DTSRTDLLDAAKTALNESNLLEFNKFKEFKKYKGKNNEFSLVEASVFDKLIRKDDSPIH
FT                   LNRLLIAVVPAVGKGTPGTARIKIRDARLDDGYGDLFSSENRVDSGYVYCINVGYSVPK
FT                   SEIDYKINIDFAGVPIKDGKSPIWVKAAFLLASGPPVFFDGTMSLGAEILPDSHKELLG
FT                   TSALLLNEANSNRKSFSGDDGELRRDYPYKRFEEISPLDSISQVDTTSQDSINEVNTEN
FT                   AQNGTGEVYLAPPSHSVY"
FT   CDS             1303..2127
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B5A2K1"
FT                   /db_xref="InterPro:IPR009516"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2K1"
FT                   /protein_id="ACF33426.1"
FT                   /translation="MSKKAVPPIVKAQYELYNRKLNRAIKVSGNQKKLDASFVGFSEGS
FT                   NPETGKPHADMSMSAKVKRVNTWLKNFDREYWDNQFASKPIPRPVKQVLKGSSSKSQYR
FT                   DEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLKYKEDENVVEVSFNDLAAQKAGDKLV
FT                   SILLEINVVGGAVDDKGRVAVLEKDASVTVDYLLGSPYETINLVSGLNKINFRSMTDVV
FT                   DSIPSLLNERKVCVFQNDDSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT"
XX
SQ   Sequence 2205 BP; 605 A; 429 C; 517 G; 654 T; 0 other;
     ctggacatct cgagtttgct ctttggtggt cattgagtat cgaatttagt gtctgattct        60
     cattctttta aaaaaaagta aaatatatcc ttggtgactg tgtcatcatg tttagcagaa       120
     gttcctctac tcgcagctcc tttgtgggga gcaggggtgg ttccattttt ggaggggaat       180
     ctgttaagaa gtctagtact gtgagggggt tctctgctgg tcttgaaaga tcacgaggat       240
     taccttccgc cagcgctggt gaaaaccaga tctcgttgcc ggggcttagg atcccagtta       300
     agacttcttc acaaccggga aattactacc ttaatgagag aggtattgat ttgccaattg       360
     tgcaacagca gaagtttctg gccgttgacg gcaaagaaat gggggagtgt taccttttgg       420
     acacttctcg aactgatctg ttggacgccg ctaaaacagc gttaaatgaa tctaatcttc       480
     ttgaattcaa caagtttaag gaatttaaga agtataaggg aaagaacaac gaattctctt       540
     tggttgaggc atcagttttc gacaaactga tcaggaagga cgattctccc atacacctta       600
     acaggctttt aatagctgtt gtgcctgccg taggaaaagg aacaccagga accgcacgaa       660
     ttaaaattcg tgacgcgcgc ctggatgatg gttatggtga tctttttagt tctgaaaatc       720
     gtgtggactc tggctacgtt tattgtataa atgtaggtta ttctgttccc aagtctgaaa       780
     tcgattacaa aatcaatatt gattttgccg gggtacccat caaagatggt aaatccccga       840
     tttgggtcaa agctgctttc cttttggcta gtggcccccc tgtgttcttt gatggaacaa       900
     tgagcttggg tgctgagatt ttgcccgact ctcacaaaga gttgttgggc acctctgctt       960
     tgttgttgaa tgaggcgaat tccaatagga agtcgttctc tggagatgac ggagagctta      1020
     gaagggatta tccctataag cgttttgagg aaatttcacc tttggattct ataagtcagg      1080
     tcgatacgac cagtcaagac tccattaatg aggtgaacac cgaaaatgct caaaacggta      1140
     ctggtgaggt gtatttggca cctccttcac attccgttta ttaataactt agttgttaat      1200
     gcattgaatg catatgacac atagtgtcaa ttttgtggtt aaaaaatttt ctaaccgcat      1260
     tatatttcat tattgaatta atactaagta tttaagtttt caatgtcgaa gaaagctgtt      1320
     ccaccaatcg ttaaggctca atacgagctt tataatcgta agttgaacag agccatcaag      1380
     gtttccggca atcaaaagaa gctagacgct tcttttgtcg ggttcagtga aggctctaac      1440
     ccagaaactg ggaaacctca cgcggacatg tctatgtccg ctaaggttaa gcgcgttaat      1500
     acgtggctta aaaactttga tcgcgaatac tgggataacc aattcgcatc aaaacccatt      1560
     cctagacctg taaaacaggt cttgaagggt tcatcctcta agtctcaata ccgagatgaa      1620
     ggagaggtgg tctttacccg aaaagactcc caaaaatccg ttaggactgt gtcctattgg      1680
     gtttgtactc ctgagaagtc aatgaaacct ctcaaataca aggaggacga aaacgtcgtt      1740
     gaagttagtt tcaatgacct cgcagcccaa aaggctggtg acaaattggt ttccatcctg      1800
     ttggaaatca atgtggtggg cggtgccgtc gacgataagg gtcgagtggc tgtcctggaa      1860
     aaggatgctt ctgtgacggt tgattacctt ctcggaagcc cgtatgaaac cataaatctt      1920
     gtttcgggtt taaacaagat aaattttaga tccatgacgg atgtggttga ctccataccg      1980
     tcgctcttga atgagcgtaa ggtgtgtgtc ttccagaatg acgatagttc gtcattttac      2040
     attcgaaaat gggctaactt ccttcaggaa gtttcggcag ttttaccggt aggaaccggt      2100
     aaatcttcca caatagttct aacttagttc ggactatttg cctgctagtg ggcatatctc      2160
     acaatttgtg agataaacgg catagccgtt gtttgctgag caaac                      2205
//