ID   EU796086; SV 1; linear; genomic RNA; STD; VRL; 2202 BP.
XX
AC   EU796086;
XX
DT   16-JUL-2008 (Rel. 96, Created)
DT   30-JUL-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Raspberry bushy dwarf virus isolate GR-4 segment RNA2, complete sequence.
XX
KW   .
XX
OS   Raspberry bushy dwarf virus
OC   Viruses; Riboviria; Idaeovirus.
XX
RN   [1]
RP   1-2202
RX   DOI; 10.1007/s10658-008-9362-6.
RX   AGRICOLA; IND44160414.
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   "Biological, serological and molecular characterisation of Raspberry bushy
RT   dwarf virus from grapevine and its detection in the nematode Longidorus
RT   juvenilis";
RL   Eur. J. Plant Pathol. 123(3):261-268(2009).
XX
RN   [2]
RP   1-2202
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   ;
RL   Submitted (06-JUN-2008) to the INSDC.
RL   Plant Pathology, Agricultural Institute of Slovenia, Hacquetova 17,
RL   Ljubljana SI-1000, Slovenia
XX
DR   MD5; 2aa5a5c8971a4a3c74c7703e197e51e3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2202
FT                   /organism="Raspberry bushy dwarf virus"
FT                   /segment="RNA2"
FT                   /host="grapevine"
FT                   /isolate="GR-4"
FT                   /mol_type="genomic RNA"
FT                   /country="Slovenia"
FT                   /db_xref="taxon:12451"
FT   CDS             106..1182
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2J8"
FT                   /protein_id="ACF33423.1"
FT                   /translation="MFSRSSSTRSSFVGSRGGSIFGGESVKKSSTVRGFSAGLERSRGL
FT                   PSASAGENQISLPGLRIPVKTSSQPGNYYLNERGIDLPIVQQQKFLAVDGKEMGECYLL
FT                   DTSRTDLLDAAKTALNESNLLEFNKFKEFKKYKGKNNEFSLVEASVFDKLIRKDDSPIH
FT                   LNRLLIAVVPAVGKGTPGTARIKIRDARLDDGYGDLFSSENRVDSGYVYCINVGYSVPK
FT                   SEIDYKINIDFAGVPIKDGKSPIWVKAAFLLASGPPVFFDGTMSLGAEILPDSHKELLG
FT                   TSALLLNEANSNRKSFSGDDGELKRDYPYKRFEEISPLDSISQVDTTSQDSTNEVNTEN
FT                   AQNGTGEVYLAPPSHSVY"
FT   CDS             1300..2124
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B5A2J9"
FT                   /db_xref="InterPro:IPR009516"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2J9"
FT                   /protein_id="ACF33424.1"
FT                   /translation="MSKKAVPPIVKAQYELYNRKLNRAIKVSGNQKKLDASFVGFSEGS
FT                   NPETGKPHADMSMSAKVKRVNTWLKNFDREYWDNQFASKPIPRPVKQVSKGSSSKSQYR
FT                   DEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLKYKEDENVVEVSFNDLAAQKAGDKLV
FT                   SILLEINVVGGAVDDKGRVAVLEKDASVTVDYLLGSPYETINLVSGLNKINFRSMTDVV
FT                   DSIPSLLNERKVCVFQNDDSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT"
XX
SQ   Sequence 2202 BP; 603 A; 435 C; 514 G; 650 T; 0 other;
     ctggacatct cgagtttgct ctttggtggt cattgagtat cgaatttagt gtctgattct        60
     cattcttttt aaaaagtaaa atatatcctt ggtgactgtg tcatcatgtt tagcagaagt       120
     tcctctactc gcagctcctt tgtggggagc aggggtggtt ccatttttgg aggggaatct       180
     gttaagaagt ctagtactgt gagggggttc tctgctggtc ttgaaagatc acgaggatta       240
     ccttccgcca gcgctggtga aaaccagatc tcgttgccgg ggcttaggat cccagttaag       300
     acttcttcac aaccgggaaa ttactacctt aatgagagag gtattgattt gccaattgtg       360
     caacagcaga agtttctggc cgttgacggc aaagaaatgg gggagtgtta ccttttggac       420
     acttctcgaa ctgatctgtt ggacgccgct aaaacagcgt taaatgaatc taatcttctt       480
     gaattcaaca agtttaagga atttaagaag tataagggaa agaacaacga attctctttg       540
     gttgaggcat cagttttcga caaactgatc aggaaggacg attcccccat acaccttaac       600
     aggcttttaa tagctgttgt gcctgccgta ggaaaaggaa caccaggaac cgcacgaatt       660
     aaaattcgtg acgcgcgcct ggatgatggt tatggtgatc tttttagttc tgaaaatcgt       720
     gtggactctg gctacgttta ttgtataaat gtaggttatt ctgttcccaa gtctgaaatc       780
     gattacaaaa tcaacattga ttttgccggg gtacccatca aagatggtaa atccccgatt       840
     tgggtcaaag ctgctttcct tttggctagt ggcccccctg tgttctttga tggaacaatg       900
     agcttgggtg ctgagatttt gcccgactct cacaaagagt tgttgggcac ctctgctttg       960
     ttgttgaatg aggcgaattc caataggaag tcgttctctg gagatgacgg agagcttaaa      1020
     agggattatc cctataagcg ttttgaggaa atttcacctt tggattctat aagtcaggtc      1080
     gatacgacca gtcaagactc cactaatgag gtgaacaccg aaaatgctca aaacggtact      1140
     ggtgaggtgt atttggcacc tccttcacat tccgtttatt aataacttag ttgttaatgc      1200
     attgaatgca tatgacacat agtgtcaatt ttgtggttaa aatttttcta accgcattat      1260
     atttcattat tgaattaata ctaagtattt aagttttcaa tgtcgaagaa agctgttcca      1320
     ccaatcgtta aggctcaata cgagctttat aatcgtaagt tgaacagagc catcaaggtt      1380
     tccggcaatc aaaagaagct agacgcttct tttgtcgggt tcagtgaagg ctctaaccca      1440
     gaaactggga aacctcacgc ggacatgtct atgtccgcta aggttaagcg cgttaatacg      1500
     tggcttaaaa actttgatcg cgaatactgg gataaccaat tcgcatcaaa acccattcct      1560
     agacctgtaa aacaggtctc gaagggttca tcctctaagt ctcaataccg agatgaagga      1620
     gaggtggtct ttacccgaaa agactcccaa aaatccgtta ggactgtgtc ctattgggtt      1680
     tgtactcctg agaagtcaat gaaacctctc aaatacaagg aggacgaaaa cgtcgttgaa      1740
     gttagtttca atgacctcgc agcccaaaag gctggtgaca aattggtttc catcctgttg      1800
     gaaatcaatg tggtgggcgg tgccgtcgac gataagggtc gagtggctgt cctggaaaag      1860
     gatgcttccg tgacggttga ttaccttctc ggaagcccgt atgaaaccat aaatcttgtt      1920
     tcaggtttaa acaagataaa ttttagatcc atgacggatg tggttgactc cataccatcg      1980
     ctcttgaatg agcgtaaggt gtgtgtcttc cagaatgacg atagttcgtc attttacatt      2040
     cgaaaatggg ctaacttcct tcaggaagtt tcggcagtct taccggtagg aaccggtaaa      2100
     tcttccacaa tagttctaac ttagttcgga ctatttgcct gctagtgggc atatctcaca      2160
     atttgtgaga taaacggcat agccgttgtt tgctgagcaa ac                         2202
//