ID   EU796085; SV 1; linear; genomic RNA; STD; VRL; 2203 BP.
XX
AC   EU796085;
XX
DT   16-JUL-2008 (Rel. 96, Created)
DT   30-JUL-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Raspberry bushy dwarf virus isolate GR-6 segment RNA2, complete sequence.
XX
KW   .
XX
OS   Raspberry bushy dwarf virus
OC   Viruses; Riboviria; Idaeovirus.
XX
RN   [1]
RP   1-2203
RX   DOI; 10.1007/s10658-008-9362-6.
RX   AGRICOLA; IND44160414.
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   "Biological, serological and molecular characterisation of Raspberry bushy
RT   dwarf virus from grapevine and its detection in the nematode Longidorus
RT   juvenilis";
RL   Eur. J. Plant Pathol. 123(3):261-268(2009).
XX
RN   [2]
RP   1-2203
RA   Mavric Plesko I., Virscek Marn M., Sirca S., Urek G.;
RT   ;
RL   Submitted (05-JUN-2008) to the INSDC.
RL   Plant Pathology, Agricultural Institute of Slovenia, Hacquetova 17,
RL   Ljubljana SI-1000, Slovenia
XX
DR   MD5; b556c2589fb308b71c4e6cc80a4f539f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2203
FT                   /organism="Raspberry bushy dwarf virus"
FT                   /segment="RNA2"
FT                   /host="grapevine"
FT                   /isolate="GR-6"
FT                   /mol_type="genomic RNA"
FT                   /country="Slovenia"
FT                   /db_xref="taxon:12451"
FT   CDS             107..1183
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2J6"
FT                   /protein_id="ACF33421.1"
FT                   /translation="MFSRSSSTRSSFVGSRGGSIFGGGSAKKSSTVRGFSAGLERSRGL
FT                   PSASAGENQISLPGLRIPVKTSSQPGNYYLNERGIDLPIVQQQKFLAADGKEMGECYLL
FT                   DTSRTDLLDAAKTALNESNLLEFNKFKEFKKYKGKNNEFSLVEASVFDKLIRKDAPPIH
FT                   LNRLLIAVVPAVGKGTPGTARIKIRDARLDDGYGELFSSENRVDSGYIYCINVGYSVPK
FT                   SEIDYKINIDFAGVPIKDGKSPIWVKAAFLLASGPPVFFDGTMSLGAEILPDSHKELLG
FT                   TSALLLNEANSNRKSFSGDDGELRRDYPYKRFEEVSPLDSISQVDTTSQDSTSEVNTEN
FT                   AQNGTGEVYLAPPSHSVY"
FT   CDS             1301..2125
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B5A2J7"
FT                   /db_xref="InterPro:IPR009516"
FT                   /db_xref="UniProtKB/TrEMBL:B5A2J7"
FT                   /protein_id="ACF33422.1"
FT                   /translation="MSKKAVPPIVKAQYELYNRKLNRAIKVSGNQKKLDASFVGFSEGS
FT                   NPETGKPHADMSMSAKVKRVNTWLKNFDREYWDSQFASKPIPRPAKQVLKGSSSKSQYR
FT                   DEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLKYKEDENVVEVGFNDLAAQKAGDKLV
FT                   SILLEINVVGGAVDDKGRVAVLEKDASVTVDYLLGSPYETINLVSGLNKINFRSMTDVV
FT                   DSIPSLLNERKVCVFQNDDSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT"
XX
SQ   Sequence 2203 BP; 596 A; 435 C; 520 G; 652 T; 0 other;
     ctggacatct cgagtttgct ctttggtggt cattgagtat cgaatttagt gtctgattct        60
     cattcctctt ttaaaagtaa aatatatcct tggtgactgt gtcatcatgt ttagcagaag       120
     ttcctctact cgcagctcct ttgtggggag caggggtggc tccatttttg gagggggatc       180
     tgctaagaag tctagtactg tgagggggtt ctctgctggt cttgaaagat cacgaggatt       240
     accttccgcc agcgctggtg aaaaccagat ctcgttgccg gggcttagga tcccagttaa       300
     gacttcttca caaccgggaa attactacct taatgagaga ggtattgatt tgccaattgt       360
     gcaacagcag aagtttctgg ccgctgacgg caaagaaatg ggggagtgtt accttttgga       420
     cacttctcga actgatctgt tggacgctgc taaaacagcg ttaaatgaat ctaatcttct       480
     tgaattcaat aagtttaagg aatttaagaa gtataaggga aagaacaatg aattctcttt       540
     ggttgaggca tcagttttcg acaaactgat caggaaggac gctcctccca tacaccttaa       600
     caggctttta atagccgttg tgcctgccgt aggaaaagga acaccaggaa ccgcacgaat       660
     taaaattcgt gacgcgcgcc tggatgatgg ttatggtgag ctttttagtt ctgaaaatcg       720
     tgtggactct ggttacattt attgtataaa tgtaggttat tctgttccta agtctgaaat       780
     cgattacaaa atcaatattg attttgccgg ggtacccatc aaagatggta aatccccgat       840
     ttgggtcaaa gctgctttcc ttttggctag tggcccccct gtgttctttg atggaacaat       900
     gagcttgggt gctgagattt tgcccgactc tcacaaagag ttgttgggca cttctgcttt       960
     gttgttgaat gaggcgaatt ccaataggaa gtcgttctct ggagatgacg gagagcttag      1020
     aagggattat ccctataagc gtttcgagga agtttcacct ttggattcta taagtcaggt      1080
     cgatacgacc agtcaagact ccactagtga ggtgaacacc gaaaatgctc aaaacggtac      1140
     tggtgaggtg tatttggcac ctccttcaca ttccgtttat taataactta gttgttaatg      1200
     cattgaatgc atatgacaca tagtgtcaat tttgtggtta aaatttttct aaccgcatta      1260
     tatttcatta ttgaattaat actaagtatt taagttttca atgtcgaaga aagctgttcc      1320
     accaatcgtt aaggctcaat acgagcttta taatcgtaag ttgaacagag ccatcaaggt      1380
     ttccggcaat caaaagaagc tagacgcttc ttttgtcggg ttcagtgaag gctctaaccc      1440
     agaaactggg aaacctcacg cggacatgtc tatgtccgct aaggttaagc gcgttaatac      1500
     gtggcttaaa aactttgatc gcgaatactg ggatagccaa ttcgcatcaa aacccattcc      1560
     tagacctgca aaacaggtct tgaagggttc atcctctaag tctcaatatc gagatgaagg      1620
     agaggtggtc tttacccgaa aagactccca aaaatccgtt aggactgtgt cctattgggt      1680
     ttgtactcct gagaagtcaa tgaaacctct caaatacaag gaggacgaaa acgtcgttga      1740
     agttggtttc aacgacctcg cagcccaaaa ggctggtgac aagttggttt ccatcttgtt      1800
     ggaaatcaat gtggtgggcg gtgccgtcga cgataaaggt cgagtggctg tcctggaaaa      1860
     ggatgcttcc gtgacggttg attaccttct cggaagtccg tatgaaacca taaatcttgt      1920
     ttcgggttta aacaagataa attttagatc catgacggat gtggttgact ccataccatc      1980
     gctcttaaat gagcgtaagg tgtgtgtctt ccagaatgac gatagttcgt cattttacat      2040
     tcgaaaatgg gctaacttcc ttcaggaagt ttcggcagtc ttaccggtag gaaccggtaa      2100
     atcttccaca atagttctaa cttagttcgg actatttgcc tgccagtggg catatctcac      2160
     aatttgtgag ataaacggca tagccgttgt ttgctgagca aac                        2203
//