ID EU747708; SV 1; linear; genomic RNA; STD; VRL; 5279 BP. XX AC EU747708; XX DT 31-MAY-2011 (Rel. 109, Created) DT 31-MAY-2011 (Rel. 109, Last updated, Version 1) XX DE Mikania micrantha mosaic virus isolate SC-1 polyprotein 1 (RNA1) gene, DE complete cds. XX KW . XX OS Mikania micrantha mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Fabavirus. XX RN [1] RP 1-5279 RA Li D., Peng S.; RT "Complete nucleotide sequence of a new isolate within the species Gentian RT mosaic virus (GeMV) from Mikania micrantha H.B.K."; RL Unpublished. XX RN [2] RP 1-5279 RA Li D., Peng S.; RT ; RL Submitted (24-MAY-2008) to the INSDC. RL College of Life Science, Sun Yat-sen University, State Key Laboratory of RL Biocontrol, Guangzhou, Guangdong 510275, China XX DR MD5; 01fc9a4e7b0207a7b1bff866bf725ef8. XX FH Key Location/Qualifiers FH FT source 1..5279 FT /organism="Mikania micrantha mosaic virus" FT /host="Mikania micrantha H.B.K." FT /isolate="SC-1" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Apr-2007" FT /db_xref="taxon:487492" FT gene 21..5153 FT /gene="RNA1" FT CDS 21..5153 FT /codon_start=1 FT /gene="RNA1" FT /product="polyprotein 1" FT /db_xref="GOA:F6GPK4" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:F6GPK4" FT /protein_id="ACI22650.1" FT /translation="MVGQSIISSVQRAASIILEKCAKFTTKTLENFLICLKDAIRGAFA FT SWMPNIEQAFSWFGNIFEVLKRWASSIHDGISGLLVGIEECLYMGVAIVSSTCIVALIE FT KFLVATKMIASPCNAPSLFLAGITAAVGSTYLFTKGVEKSSTISDMMEFVSLSCGKLLN FT VAFGADLKGKIPQSEGQFGPSIDLESLAATMESWSTKSLNEVGRSFGAITQIKNGAVAM FT RDIVTYLFTSLGEIGSKVLGFESQVLSDLSILLGENVADWLDECDCMIAFMLEFTSNAR FT EIFDRLAQLIEKGRSIRAGLLKTVHRGSPQVMALVTKALEKLTELHNSVVMAGSNGSRR FT APFMVFFTGSSGVGKTSVVQRMGANWLQQEQLGSNEIYARNGQDPFWSGYRRQAVVTYD FT DFGAVPGLISNEAEIINVVSRNPHAVNMADLKEKGMYFDSRLIIASSNFLAANPESGVH FT DSEAYERRRHCVIKVTLKNGVPYNPSDPCGNQEYTLLDSKSPFHALQTFESYEELWSFV FT YNRFKEHEEAEQIFLSSLPVPEGTEAEALKNLVGISVAIGSIGPSAVMKYAATHLPGHH FT FLISDGDIVYFWLENGMVTRVNIKNLGLSNLEKAELQQRSLACALTYQNLSKLFPTLNP FT LAVLYAKNIVKKGWVLENLTVSPTCTDEFMRGQIAHLPEWQKAYLYVLGKHLQDSGDKG FT WFRNCLEETKKALRSSYVWEYKKWPFAMKLAVGTLIAIFGGTVVYAMLQSLWGCAGEAS FT FVVGAAALFSEGCRLDAQSLPPNKAAGEYLFRNKKVRVRNWEGQAPCFGDTAGWIADNC FT MATLNVFGNRIQVCLMPNRGFLIVNHFAEAIPSGSMVHLESSLSSTYFVWEKKKLTLFE FT GNELALYVAPVIPKMVDSFQTRVVYDAESLPDSFKATFFSYKYDAVLQQMVPEIGEIMC FT KKKSQVMTVCSGEYRRKVPLHLQYENNTIKGDCGSLIMVELEGKMKLVAVHVAGTGQLA FT SACFIPFDERFTQTTGQSAFVMNYTEWASPEILGPGCRVIGAISKEHQVSVGGKTGFVE FT TPESWHLNTPCDKLPSVLGRNDPRLAGTMNADYDPFSVGMTKYAKEAGPFDADTLVAVC FT EEIKETWYDARGDFTFEEVSLEVALNGVANLEYFDAIVLSTSEGYPYRLERNPGDKGKA FT RYVEGDAGDYTISDKQMLEDITWFEEESKMRVPDLYCIECVKDERLPKRKVLEKPKSRL FT FTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQVGVNPYSREWSRIACKLLEKGNNILC FT CDYSRFDGFLPKCIMLKIGQLIGSFMGKNDEEVTQICNLLLACTGRYAICEKLLYRVEN FT GIPSGFPLTVIVNSILNEILGKYAYRMCFADNPMIRESFDTHVALVVYGDDNLISVSDA FT ISSKFNGEFLVDFFLKLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEWVGPM FT SRESLWPQLHFVRAKKLEMADAYVANLNYILRELWLHGSEEVTELRRMAVKTLKWLEPS FT RLLTLGQIAEFYEEQRNGDCSFLAACNATENLDLLDPLIPGQLPVATQQILPGVVVAAE FT KHYVENLDEYFVISLSTLRKFKSPEDGMVISFPYGCGRGGLPTQQFMLENVIRKGCNIR FT KNFERALSEFNKKPKGVIVISQSSVIPAYVFTVLLLAATGKINRVVSNVALTRAMQICK FT NLKYLPENFPDFF" FT mat_peptide 21..560 FT /gene="RNA1" FT /product="putative protease cofactor" FT /note="MMMVR1pro-co" FT mat_peptide 561..2333 FT /gene="RNA1" FT /product="putative helicase" FT /note="MMMVR1hel" FT mat_peptide 2334..2408 FT /gene="RNA1" FT /product="viral protein genome linked" FT /note="MMMVR1vpg" FT mat_peptide 2409..3038 FT /gene="RNA1" FT /product="protease" FT /note="MMMVR1pro" FT mat_peptide 3039..5150 FT /gene="RNA1" FT /product="RNA-dependent RNA polymerase" FT /note="MMMVR1RdRp" XX SQ Sequence 5279 BP; 1501 A; 866 C; 1305 G; 1607 T; 0 other; acgcggggga cactcaagct atggttgggc aaagcatcat ctcaagtgtg caacgcgcgg 60 catctatcat ccttgagaag tgcgccaaat ttaccacaaa aacacttgag aattttttga 120 tttgtttgaa agacgccatt cgtggcgcat ttgcttcttg gatgccaaat atagaacaag 180 ccttttcttg gtttggaaat atctttgaag tgttgaagag atgggcctct tctattcatg 240 atggcataag tggtctttta gtgggcattg aagagtgcct atatatgggg gttgccattg 300 tctcatctac ttgcattgtt gcactcatcg aaaaattttt agttgcaaca aagatgatag 360 cgagtccatg caatgctcct tctttatttc ttgctgggat tactgctgca gttgggtcga 420 cttacctttt cactaaaggt gtggagaaat cgtccacaat ttctgatatg atggagtttg 480 tatccctatc gtgtggaaaa ttgctgaacg tggcatttgg ggctgatctt aagggcaaga 540 ttccgcagag tgaagggcaa tttggaccaa gtatcgactt ggaaagcttg gcagcaacta 600 tggaatcatg gtctacaaaa tccctgaatg aggttggccg atcttttggt gctatcacgc 660 aaattaaaaa tggggctgtg gctatgcgag acatagtgac atatctcttc acatctttgg 720 gagagattgg tagcaaagtt cttggttttg agtctcaggt attatctgac ttatcgattt 780 tgcttgggga aaatgttgca gactggcttg acgagtgcga ttgcatgata gcctttatgt 840 tagaattcac ttctaacgct agggagattt ttgatcgttt agcacagctc attgagaaag 900 ggaggtctat ccgagcaggc ctgcttaaga cagttcatag gggttcacca caagttatgg 960 cattagtcac aaaggctttg gagaaactaa cagaattgca caattctgtg gtgatggcag 1020 gatcaaatgg atcccgtaga gcgcctttta tggtgttttt tacgggatct tctggagtag 1080 gaaagacatc agttgtacaa aggatgggag ctaattggct gcaacaagag caattaggct 1140 caaatgaaat ttacgctagg aatggacaag atcccttctg gtctggttac agaaggcaag 1200 cagttgttac atatgatgat tttggagcag tgcctggttt aatttcaaat gaagctgaga 1260 taattaatgt ggtttctaga aatcctcatg cagtgaatat ggcagatttg aaggagaaag 1320 gtatgtattt tgactccaga ttaataattg cgagcagtaa ctttcttgct gccaaccctg 1380 agtcaggagt gcatgattct gaagcttatg agagaagaag gcattgtgtt atcaaggtta 1440 cattaaagaa tggagtgcct tataaccctt cagatccttg tggtaaccaa gagtacactt 1500 tgttggattc taaatctcct tttcacgcgc tacaaacttt tgaaagttat gaggaacttt 1560 ggtcattcgt ttacaacaga ttcaaagaac atgaagaggc tgagcaaata tttttgtcgt 1620 ctttgcctgt gccagaggga acagaggcag aagcgcttaa aaatctggtt gggataagcg 1680 ttgctatagg atctataggg ccctctgccg tgatgaagta cgctgcaaca catttgccag 1740 ggcatcattt tttgatatca gatggagata tagtatactt ctggctagaa aatggaatgg 1800 ttactcgcgt aaatatcaaa aatcttgggt tgtctaatct tgagaaggct gagttgcaac 1860 aacgtagttt ggcttgtgct ttgacatatc agaatttgtc caaattgttt ccgacgttaa 1920 atcctttggc ggttctttat gctaagaata ttgtgaagaa gggttgggtc cttgaaaatc 1980 ttactgtctc cccaacttgc acagatgaat ttatgcgtgg ccaaattgcg cacttgccag 2040 agtggcaaaa agcttacttg tatgtacttg ggaaacatct gcaagattct ggggacaagg 2100 gttggtttcg aaattgcctt gaggaaacaa agaaggccct tcgctcatcc tatgtgtggg 2160 agtacaagaa atggccattt gcaatgaaat tggcagtggg tacattaatt gctatctttg 2220 gaggaactgt agtttacgca atgctgcaaa gtttgtgggg ttgtgcagga gaagcttcat 2280 ttgttgttgg tgcagctgca ttgttttctg aaggctgcag gctggatgca caaagtttgc 2340 ctccaaataa ggctgctggg gaatatctct ttcggaacaa gaaagtacgt gtgaggaatt 2400 gggaaggtca agccccgtgt tttggagata ctgctgggtg gattgctgac aattgcatgg 2460 ccacattaaa tgtatttgga aatcggatcc aagtttgtct catgccaaat aggggttttc 2520 ttattgtaaa tcatttcgca gaagcaatcc caagtgggtc aatggtgcat ttggagtcaa 2580 gtctgtcaag cacatatttt gtttgggaga agaaaaaatt gacacttttt gaaggaaatg 2640 aattagcctt gtacgtggct ccagtaatcc ctaagatggt tgattctttc cagaccagag 2700 tagtttatga cgccgagtcg ttgcctgata gttttaaggc aaccttcttt tcttacaaat 2760 atgatgcagt gctgcagcaa atggtgccag agattggcga gattatgtgc aagaagaaga 2820 gccaagttat gacagtgtgc tctggggaat atcgcaggaa agttccgttg catttgcagt 2880 atgagaacaa cactatcaaa ggagattgtg gatctttaat tatggtggaa ttagaaggaa 2940 aaatgaaatt ggttgctgtt catgttgctg gtacgggcca gttggcatca gcttgcttta 3000 ttcctttcga tgagagattc acccaaacta ctggtcagag tgcatttgtt atgaactaca 3060 ctgagtgggc ctcccctgag attttgggac ctggttgtcg tgtgattgga gcaatatcaa 3120 aagaacacca ggtctctgta ggaggaaaaa cgggttttgt ggaaacacct gaatcctggc 3180 atttgaacac gccttgcgat aaattgccta gtgttttggg gagaaatgac ccgcgactgg 3240 ctggaactat gaatgctgac tatgacccat tttcagtcgg aatgacaaag tatgcaaaag 3300 aagcaggtcc atttgacgct gatactttgg tggcagtttg tgaggaaatc aaagaaactt 3360 ggtatgatgc aagaggcgat tttacatttg aggaagtctc acttgaagtt gcgctgaatg 3420 gagttgcaaa cttggagtat tttgatgcca ttgttctgag tacttctgaa ggctatccat 3480 accgattgga acgtaatcct ggggataaag gaaaagcacg ttacgtggaa ggggacgctg 3540 gagactacac aatatcggac aagcaaatgc tggaagatat cacttggttt gaagaggaaa 3600 gtaagatgcg tgttcccgat ttgtattgca tagaatgtgt caaagatgaa aggttaccca 3660 agaggaaggt gctggaaaag cccaagagta gattgtttac agtgctaccc atgtcttaca 3720 atcttgtaat tagaaagaag tttttgaatt ttgttagatt tttcatgaca agaagggatg 3780 tgttgccatg tcaagttgga gtgaatccat actctcggga atggagtcgc attgcttgca 3840 agttacttga gaagggcaat aatattttat gttgtgatta tagtagattt gatggctttt 3900 tgcctaaatg cataatgctc aaaattggcc aattaattgg ctcgttcatg gggaagaatg 3960 acgaggaagt gacacaaatt tgcaatttat tgttggcttg tacagggcgt tatgccatat 4020 gtgagaaatt gctttatagg gtagaaaatg gcataccttc tgggtttcct ttgacagtca 4080 ttgtaaattc cattctgaat gaaatacttg gtaaatacgc gtataggatg tgctttgccg 4140 ataatcctat gattagggaa agttttgata ctcacgttgc tttagttgtg tatggagatg 4200 ataatttaat atctgtctct gatgcaatct cttctaagtt caatggtgaa tttcttgttg 4260 attttttcct taaattgtcc attaccgtaa cagatggagt tgataagaca aaacagggga 4320 tttcttttcg caaattgaca gattgtgatt ttttgaagag gaacttcaag gtacttccag 4380 atggtgagtg ggtagggcct atgtcgagag aaagtttgtg gccgcaatta cattttgtgc 4440 gagctaagaa attggagatg gcagatgctt atgttgcaaa tcttaattac attctgcgag 4500 aattgtggct ccatggatct gaagaagtaa ctgagttgcg aagaatggct gttaaaaccc 4560 tgaaatggct ggagccaagt agattgctga cacttgggca gattgcagag ttttatgaag 4620 agcagagaaa cggagactgc tccttcctgg cagcgtgcaa tgctactgaa aatctagatc 4680 tgctggatcc attaattcca ggacaactcc ccgttgcaac acagcaaatt ttgcctggtg 4740 ttgttgttgc agcagaaaag cattacgtcg agaatttaga tgagtacttt gtcatttcac 4800 tctcaacttt gaggaaattt aagtcacctg aagatggtat ggttatatct tttccgtatg 4860 gttgtggcag aggtgggctg ccaacacaac aatttatgct ggagaatgtc attcgaaaag 4920 gttgcaatat tagaaagaat tttgagagag ctctctctga attcaataag aagccaaaag 4980 gtgtaattgt gatatctcag agctcagtga tacccgcgta tgtcttcaca gtacttttgc 5040 tagctgctac tgggaaaata aatcgtgttg tgagtaatgt ggctcttact agagcaatgc 5100 aaatttgcaa gaatcttaag taccttccag aaaactttcc agatttcttt taagtatttg 5160 tgtgctttac tatttgtata atataaaata aaccatagag tgtgcgctat gcttttgttt 5220 taatttaaaa gtggtttgta tttttatatc aaaaaaaaaa aaaaaaaaaa aaaaaaaaa 5279 //