ID EU734831; SV 1; circular; genomic DNA; STD; VRL; 2771 BP. XX AC EU734831; XX DT 23-JUN-2008 (Rel. 96, Created) DT 11-APR-2025 (Rel. 144, Last updated, Version 4) XX DE Tomato yellow leaf curl Axarquia virus isolate IT:R-2-2, complete genome. XX KW . XX OS Tomato yellow leaf curl Axarquia virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2771 RX DOI; 10.1016/j.virusres.2009.03.001. RX PUBMED; 19463717. RA Davino S., Napoli C., Dellacroce C., Miozzi L., Noris E., Davino M., RA Accotto G.P.; RT "Two new natural begomovirus recombinants associated with the tomato yellow RT leaf curl disease co-exist with parental viruses in tomato epidemics in RT Italy"; RL Virus Res. 143(1):15-23(2009). XX RN [2] RP 1-2771 RA Davino S., Dellacroce C., Miozzi L., Napoli C., Accotto G.P.; RT ; RL Submitted (20-MAY-2008) to the INSDC. RL Istituto di Virologia Vegetale, Consiglio Nazionale delle Ricerche, Strada RL delle Cacce 73, Torino 10135, Italy XX DR MD5; 469c79ed326888d0fc74cc0ccf9c1024. XX FH Key Location/Qualifiers FH FT source 1..2771 FT /organism="Tomato yellow leaf curl Axarquia virus" FT /host="Solanum lycopersicum" FT /isolate="IT:R-2-2" FT /mol_type="genomic DNA" FT /geo_loc_name="Italy: Sicily, Ragusa" FT /collection_date="2004" FT /db_xref="taxon:232380" FT gene 148..495 FT /gene="V2" FT CDS 148..495 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /protein_id="ACE82188.1" FT /translation="MWDPLLNEFPDSVHGLRCMLAIKYLQLVEETYEPNTLGHDLIRDL FT ISVIRARDYAEANRRYTNFNARLEGSSKTELRQPVYQPCCCPHCPRHQASIMDLQAHVS FT KAADVQNVQKP" FT gene 308..1081 FT /gene="V1" FT CDS 308..1081 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="CP" FT /protein_id="ACE82189.1" FT /translation="MPKRTGDILISTPVSKVRRRLNFDSPYTSRAAAPTVQGIKRRSWT FT YRPMYRKPRMYRMYRSPDVPPGCEGPCKVQSYEQRDDVKHTGVVRCVSDVTRGSGITHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTSPMDFGQVFNMFDNE FT PSTATVKNDLRDRYQVMRKFHATVVGGPSGMKEQCLLKRFFKINTHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1078..1482) FT /gene="C3" FT CDS complement(1078..1482) FT /codon_start=1 FT /gene="C3" FT /product="REn protein" FT /note="replication enhancer protein" FT /protein_id="ACE82190.1" FT /translation="MDLRTGEYITALQATSGVYTFGITNPLYFKITKHNQNPFNNKYNT FT LIFQIRFNHNLRKELGIHKCFLNFRIWTTLQSPTGHFLRVFKYQVCKYLNNLGVISLNN FT VIRAVDYVLYDVFEGTIDVAENHEIKFNLY" FT gene complement(1223..1630) FT /gene="C2" FT CDS complement(1223..1630) FT /codon_start=1 FT /gene="C2" FT /product="TrAP protein" FT /note="transcriptional activator protein" FT /protein_id="ACE82191.1" FT /translation="MRSSSPSTSHCSQIPIKIQHHIAKKRQVRRRRVDLDCGCSYYIHL FT DCINHGFTHRGVHHCASSNEWRLYLRDNKSPIFQDNQTQSEPIQQQVQHTNIPNQIQPQ FT FEEGTGDSQMFSQLPHLDDFTVSDWSFFKSI" FT gene complement(1539..2612) FT /gene="C1" FT CDS complement(1539..2612) FT /codon_start=1 FT /gene="C1" FT /product="Rep protein" FT /note="replication-associated protein" FT /protein_id="ACE82192.1" FT /translation="MPRLFKIYAKNYFLTYPNCYLSKEEALSQLKNLETPTNKKYIKVC FT REFHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGEFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVMDAAARPWRPVSIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSQKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPQSSFKEYLDEEKNQPLKNWAIKNAIFVTIHQPLFT FT DTHQNTTPHRQEEAGEA" FT gene complement(2168..2461) FT /gene="C4" FT CDS complement(2168..2461) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /protein_id="ACE82193.1" FT /translation="MGNHISMCLSNSKANTNVKTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTENSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY" XX SQ Sequence 2771 BP; 771 A; 527 C; 586 G; 887 T; 0 other; taatattacc ggatggccgc gctccccgat aaagaagtgg gtcctacgca gtaatttctg 60 tcgaccaatg aaattccagc ctcaaagctt aaataattgt ttagctttct tataaacttg 120 ctcactaagt tttaaaaata ccacaaaatg tgggatccat tattaaatga atttcctgat 180 tctgtccatg gtctccgatg catgctcgca attaaatatt tgcagctagt tgaagaaacc 240 tacgaaccta atacccttgg tcacgaccta attagggatc tcatctccgt cattcgtgct 300 cgtgactatg ccgaagcgaa ccggcgatat actaatttca acgcccgtct cgaaggttcg 360 tcgaagactg aacttcgaca gcccgtatac cagccgtgct gctgccccca ctgtccaagg 420 catcaagcgt cgatcatgga cttacaggcc catgtatcga aagccgcgga tgtacagaat 480 gtacagaagc cctgatgtac ctccgggttg tgaaggtccc tgtaaagttc agtcctatga 540 gcagcgtgat gacgtcaagc ataccggtgt tgtgcgttgt gttagtgatg ttactagggg 600 ttctggtatt actcatagag ttggtaaacg tttttgtatt aagtcaattt atattttagg 660 gaagatttgg atggatgaaa atataaaaaa acaaaatcat actaaccagg ttatgttttt 720 ccttgttcga gaccgaaggc cttatggaac tagtcctatg gattttggtc aagtttttaa 780 catgtttgat aatgaaccca gtactgctac ggtgaagaac gacttaaggg ataggtatca 840 agtaatgagg aagtttcatg ctacggttgt tggaggtccg tcagggatga aggagcagtg 900 tttgctgaag agatttttta aaattaatac ccatgtagtt tataatcatc aagagcaggc 960 gaagtatgag aatcatactg agaatgcctt gttattgtat atggcttgta ctcatgcttc 1020 taacccagtg tacgctacat tgaaaatacg tatttatttt tatgatgctg taacaaatta 1080 ataaagatta aattttattt catgattttc agctacatca attgttcctt caaatacatc 1140 atacaataca taatcaactg ctctaataac attatttaaa gaaattacac ccaaattatt 1200 caaatattta caaacttgat atttaaatac tcttaaaaaa tgaccagtcg gagactgtaa 1260 agtcgtccaa atgcggaagt tgagaaaaca tttgtgaatc cccagttcct tcctcaaatt 1320 gtggttgaat ctgatttgga atattagtgt gttgtacttg ttgttgaatg ggttctgatt 1380 gtgtttggtt atcttgaaat ataggggatt tgttatcccg aaggtataaa cgccactcgt 1440 tgcttgaagc gcagtgatgt actcccctgt gcgtaaatcc atgatttatg cagtctaagt 1500 gtatgtaata tgagcatcca cagtccagat cgacccttct acgcctcacc tgcctcttct 1560 tggcgatgtg gtgttgtatt ttgatgggta tctgtgaaca atggctggtg gatggtgacg 1620 aagatcgcat tcttaatagc ccaatttttt aatggttggt ttttttcttc gtcgagatat 1680 tctttaaatg atgattgtgg gcctggattg cagaggaaga tagtgggaat gcctccttta 1740 atttgaatgg gcttcccata cttggtgttg ctctgccagt ctctttgggc ccccataaac 1800 tctttaaagt gctttaaata atgcgggtcg acgtcatcaa tgacgttata ccaagcatta 1860 ttgctgtata ctttttgact gaggtcaaga tggccgcaca aataattatg tgggcctaag 1920 gaacgggccc acatggtctt tcctgtccgg ctgtcaccct caatcactat acttaccggt 1980 ctccaaggcc gcgcagcggc atccatgacg ttctcggcga cccactcttc aagttcatct 2040 ggaacttgat taaaagaaga agaaagaaat ggagaaacat aaacttctaa aggaggacta 2100 aaaatcctat ctaaatttga acttaaatta tgaaattgta aaatatagtc ctttggggcc 2160 ttctctttta atatattgag ggcctcggat ttactgcctg aattgagtgc ttcggcatat 2220 gcgtcgttgg cagattgctg acctcctcta gctgatctgc catcgatttg gaaaactcca 2280 aaatcaatga attctccgtc tttctccacg taggtcttga catctgttga gctcttagct 2340 gcctgaatgt tcggatggaa atgtgctgac ctgtttgggg ataccaggtc gaagaaccgt 2400 tggtttttac attggtattt gccttcgaat tggataagca catggagatg tggttcccca 2460 ttctcgtgga attctctgca aactttgatg tattttttat ttgttggggt ttctaggttt 2520 tttaattggg aaagtgcttc ctctttagag agataacaat tgggatatgt caggaaataa 2580 tttttggcat atattttaaa taaacgaggc atgttgaaat gaatcggtgt ccctcacagc 2640 tctatggcaa tcggtgtatt ggtgtcttac ttatacctgg acacctaatg gctatatggt 2700 aatttaataa atgtttattg caattcaaaa ttcaaacttc aaaaatcaaa tcattaaagc 2760 ggccatccgt a 2771 //