ID EU734799; SV 1; linear; genomic RNA; STD; VRL; 4550 BP. XX AC EU734799; XX DT 22-JUN-2008 (Rel. 96, Created) DT 10-MAY-2009 (Rel. 100, Last updated, Version 2) XX DE Plum pox virus isolate Pl38 polyprotein gene, partial cds. XX KW . XX OS Plum pox virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4550 RA Ulubas Serce C., Candresse T., Svanella-Dumas L., Krizbai L., Gazel M., RA Caglayan K.; RT "Further characterization of a new recombinant group of Plum pox virus RT isolates, PPV-T, found in orchards in the Ankara province of Turkey"; RL Virus Res. 142(1-2):121-126(2009). XX RN [2] RP 1-4550 RA Ulubas Serce C., Candresse T., Svanella-Dumas L., Krizbai L., Gazel M., RA Caglayan K.; RT ; RL Submitted (21-MAY-2008) to the INSDC. RL Plant Protection Department, Mustafa Kemal University, Faculty of RL Agriculture, Hatay 31034, Turkey XX DR MD5; 66757d61df1be77ecc47db1009be47d8. XX FH Key Location/Qualifiers FH FT source 1..4550 FT /organism="Plum pox virus" FT /host="plum" FT /isolate="Pl38" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="acronym: PPV-T" FT /db_xref="taxon:12211" FT CDS 97..>4550 FT /codon_start=1 FT /product="polyprotein" FT /note="contains P1, HCPro, P3, 6K1, and CI" FT /db_xref="GOA:B3VDF3" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR011492" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:B3VDF3" FT /protein_id="ACE79184.1" FT /translation="MSTIVFGSFTCHLDAAIHQDNADRLAKAWTRPENRQVSNVHLLCR FT RAAKSLINTYESATASAWKGLEEKLQPMFAKREFSKTVTKRKGLRCFKESSEKFIEKKL FT RKQYQEERERFQFLNGPDAIVNQISVGKSEASVWVPFPHIIEKPSFATPSMKKKVVFTK FT VRMSEASLQLFMRRVAANAKANGQKVEIIGRKRVVGNYTTKSRLTYFRTHVRHLDGSKP FT RYDLVLDEATKRILQLFANTSGFHHVHKKGEITPGMSGFVVNPMNLSDPMQVYDTDLFI FT VRGKHNSILVDSRCKVSKEQSSEIVHYSDPGKQFWDGFTNSFMQCKLRETDHQCTSDLD FT VKECGYVAALVCQAIIPCGKITCLQCAQKYSYMSQQEIRDRFSTVIEQHEKTVMDNYPQ FT FSHVLAFLKRYRELMRVENQNYEAFKDITHMIGERKEAPFSHLNKINELIIKGGMMSAQ FT DYIEASDHLRELARYQKNRTENIRCGSMKAFRNKISSKAHVNMQLMCDNQLDVNGNFVW FT GQREYHAKRFFRNYFDVIDVSDGYRRHIIRENPRGIRKLAIGNLVMSTNLAALRKQLLG FT EACTHFEVSKECTSKRGENFVYQCCCVTHEDGTPLESEILSPTKNHLVVGNSGDSKYVD FT LPAAKGNEMYIAKAGYCYINIFLAMLINVNEDEAKSFTKTVRDTLVPKLGTWPSMMDLA FT TACHFLAVLYPETRNAELPRILVDHEAKIFHVVDSFGSLSTGMHVLKANTINQLISFAS FT DTLDSSMKTYLVGGLEVDKCDEFKNVKLLIRSIYKPQVMEQVLKEEPYLLLMSVLSPGV FT LMALFNSGSLEKATQYWITRSHSLAAITSMLSALAAKVSLASTLNAQMSVIDEHAAVLC FT DSVFDGTKPYASYMMAVKTLERMKARTESDHTLNDLGFSVLRQATPHLVEKSYLQELEQ FT AWRELSWSERFSAILESQRWRKHIPKPFIPKDAADLGGRYDISVRSLLGSQYKRLKDVV FT RRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKMFDMLIIFGLLLSIGATCNSMINE FT HKHLKQVAADREDKKRFKRLQVLHTRLSEKVGCTPTADEFLEYVQGENPDLLKHAEDLI FT GDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERSDGVYKILNKLKGVMGSIDQTVH FT HQSLDDIEDMLDEKKLTVDFVLQSNEVAPTVPFDSTFEKWWTNQLETGNVIPHYRTEGH FT FLEFTRENAAHIANEVMHGSHQDILIRGAVGSGKSTGLPFHLSKKGHVLLIEPTRPLAE FT NVCKQLRGQPFNVNPTLRMRGMSTFGSTPITVMTSGYALHFLANNPTYLDNYKCIIFDE FT CHVHDASAMAFRCLLSEYSYPGKILKVSATPPGHEVDFKTQKEVKVIVEEALSFQQFIS FT NLGTGCNSDILKHGVNVLVYVASYNEVDTLSKLLTDRSFKVSKVDGRTMKVGNVEIPTS FT GTQAKPHFVVATNIIENGVTLDI" XX SQ Sequence 4550 BP; 1426 A; 927 C; 1040 G; 1157 T; 0 other; tctcaagcta tcaaaatttt ccaaatctca ctcaaaagat caaaaatcaa caaagaacat 60 tcctcaattt ttctaccaaa ttcactgcaa gtcaagatgt caaccattgt atttggctca 120 tttacttgcc acctcgatgc agctatccac caggataatg cagacagatt ggcaaaggcc 180 tggacccgtc cagagaaccg ccaagtcagt aacgtgcatc tactgtgccg aagagcggca 240 aaaagtctca taaatacata tgagagtgca acagctagtg cttggaaagg gctagaggag 300 aagttgcaac ctatgtttgc taagcgagag tttagcaaaa cagtcacaaa gagaaaaggg 360 cttcggtgct tcaaagaaag ctctgagaag tttattgaaa agaagctcag gaaacagtat 420 caagaggagc gtgagagatt ccagtttctc aacggtccag atgcaatagt caaccaaatc 480 agtgttggca aaagtgaagc ttcagtatgg gtgccattcc ctcatattat tgagaaacct 540 agctttgcaa caccatcaat gaaaaagaag gtagtgttta ccaaggttag gatgtccgag 600 gcatcactac aactttttat gaggagggtt gctgcaaacg ccaaggcaaa tggtcaaaaa 660 gttgagatca tagggcgtaa gcgtgtagtt ggtaactaca caacgaaaag tcgtctgaca 720 tactttcgca cccatgttcg gcacttggat ggttcaaaac cacgctatga ccttgtgttg 780 gacgaggcaa ccaagaggat tctgcaactg tttgcaaaca caagtggctt ccaccatgtc 840 cacaagaaag gggagataac accaggaatg agcggatttg tggtaaatcc catgaatcta 900 tcggacccaa tgcaagtgta tgacacggat ctttttatag ttcgtggaaa acacaactcc 960 attcttgttg actcacggtg taaggtttcc aaagagcaaa gcagtgagat agtccactac 1020 tccgacccag gcaaacaatt ttgggatggt ttcaccaatt catttatgca gtgcaagctg 1080 cgcgaaactg atcatcagtg cacatctgac ctggacgtga aggagtgtgg ttatgttgca 1140 gcacttgtgt gccaagcgat aatcccttgt ggaaaaatca catgtctgca atgtgctcaa 1200 aagtactctt acatgtcaca gcaggaaata cgtgatagat tttcgacagt gattgagcag 1260 catgagaaaa cagtgatgga taactatcca caattttcac atgttctcgc ttttctaaag 1320 aggtatcgtg aattgatgcg cgtggaaaat cagaattatg aagctttcaa agatatcacg 1380 cacatgatag gcgagcgcaa agaagcacct ttttcccatc tcaataagat caatgaatta 1440 atcattaagg gtggtatgat gagcgcacaa gactacatag aagcctcaga tcatctgcgc 1500 gaactagcgc gatatcaaaa gaatcgcacg gagaatattc gatgtgggtc tatgaaagct 1560 ttcagaaaca agatatcatc gaaagcacat gtcaacatgc aactcatgtg tgacaatcaa 1620 cttgatgtca acggcaactt cgtctggggt cagagggaat accatgcaaa acgattcttc 1680 aggaattact ttgacgtgat tgatgttagc gatggctaca gacgtcacat cattcgagag 1740 aaccctagag gcattcgcaa attggccatt ggcaatcttg tcatgtcaac aaatcttgct 1800 gcactgcgca agcaattact tggagaggcg tgcactcact ttgaagtttc gaaagagtgt 1860 acgagcaagc gaggggaaaa ttttgtgtat caatgctgct gcgttactca tgaagacgga 1920 acaccgttag aatcagagat actaagtcca acgaagaacc acttagttgt tggcaactca 1980 ggtgattcaa agtacgtgga tttacctgcc gcgaaaggaa atgagatgta catagcaaag 2040 gctggttact gttacattaa catttttctt gctatgttga tcaatgtgaa tgaagatgag 2100 gcaaagagtt tcacaaaaac agtgcgtgat actcttgtgc ccaaacttgg aacatggcca 2160 tcaatgatgg atttggctac agcatgccat tttcttgcag ttctctaccc agaaactcga 2220 aatgctgaat taccacggat acttgttgat cacgaggcaa agatattcca cgtggttgat 2280 tcatttgggt cattatcaac tggtatgcat gtccttaagg caaacacaat caatcaactt 2340 atcagctttg ctagtgatac attggattca agcatgaaga catatctagt tgggggtctc 2400 gaagttgata agtgtgacga attcaagaac gtcaaactct taattagaag catctataaa 2460 ccacaagtga tggagcaagt gctcaaggag gaaccatatt tattgcttat gagcgtttta 2520 tcacctggcg tcttgatggc attattcaat agtggttcgc tggaaaaagc tacacaatat 2580 tggataacac gctctcatag tttggcagca atcacatcaa tgctttcggc acttgcagcc 2640 aaagtttcac ttgcaagcac attgaatgca caaatgagtg ttattgacga acatgcagca 2700 gttctgtgtg acagtgtctt tgatggaacc aagccatatg catcctacat gatggcagtg 2760 aagactttag aaagaatgaa ggcacgaacc gaatctgatc acaccctgaa tgatttaggg 2820 ttttcagtac tcagacaggc aactccacat ctggttgaaa aaagttatct ccaggaattg 2880 gagcaggctt ggagagaatt aagttggtcg gaaagattct ctgcaatctt ggaatcgcag 2940 cggtggcgaa aacatatacc aaagcccttc atcccgaaag acgcagcaga tttaggaggc 3000 aggtacgaca tctccgttcg gtcattactt ggcagtcaat acaaacgcct gaaagacgtg 3060 gttcggcgga aaagagacga cgtcgtttgt tacacacacc agtcgatggg gaagctattc 3120 tgcaaagcta tcggaatttc cacaagtttt cttccaagca ctctgaagat gtttgacatg 3180 ctcatcatat ttggtctctt gctttcaata ggagccacat gcaattcaat gattaatgaa 3240 cacaaacatt taaagcaagt tgctgctgat cgtgaagata agaaaagatt caagagattg 3300 caggttttgc acacgagact atcagaaaag gttggttgca caccaacagc ggatgaattt 3360 cttgaatatg tgcaaggtga aaaccctgat ctattgaaac atgcagagga cctgatcgga 3420 gatgggcaag ttgttgtgca tcaaagtaaa agagattcac aagctaatct ggaacgagtc 3480 gtagcatttg tagcccttgt tatgatgctt tttgactcgg agcggagtga tggtgtttac 3540 aaaatcctca ataagcttaa gggcgtcatg ggaagtatcg atcagactgt tcaccatcaa 3600 agtttggacg acattgaaga catgttggac gaaaagaagt tgacagtcga ttttgtcttg 3660 caaagtaatg aagttgcacc aactgtccca tttgactcaa cttttgagaa atggtggact 3720 aatcagcttg aaacaggaaa tgtgatccca cactacagaa ctgaaggaca ctttctcgaa 3780 tttacacgag agaatgcagc gcacattgca aatgaagtca tgcatggttc acatcaagac 3840 atcctaatcc gcggagcagt tggctcaggt aagtcaactg ggttgccatt tcatctaagc 3900 aaaaagggtc atgttctgct aattgaaccc actcgaccgt tagctgaaaa tgtgtgcaag 3960 caactacgag ggcaaccatt caatgttaac cccacattac gtatgcgcgg aatgagcacc 4020 tttgggtcaa ctccaattac tgtgatgacg agtggctacg cactgcactt cctggcgaac 4080 aatccaacct atttggataa ctacaagtgc attatcttcg acgagtgtca cgtacacgac 4140 gcatcagcaa tggcatttag atgtcttctc tcggagtatt cgtacccagg gaagatactg 4200 aaagtctcag caacacctcc cggacatgaa gttgatttca agacacaaaa ggaggtgaag 4260 gtaatcgttg aggaagcatt gtcatttcag cagttcattt ccaatcttgg cactggatgc 4320 aatagtgaca tcctgaagca tggcgttaac gtgttggtct atgtggcaag ttacaatgag 4380 gtggacacac taagcaaact gcttacggat agaagcttta aggtttcgaa agttgatggg 4440 cggactatga aagtcggcaa tgtcgagatc ccaacgagtg gcactcaagc caagccacat 4500 ttcgtagtcg caacaaacat tatcgaaaat ggagtcacac ttgatattga 4550 //