ID EU723570; SV 1; linear; genomic RNA; STD; VRL; 3047 BP. XX AC EU723570; XX DT 14-JUN-2008 (Rel. 96, Created) DT 14-JUN-2008 (Rel. 96, Last updated, Version 1) XX DE Cucumber mosaic virus strain PHz segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3047 RA Chen J., Wang H.; RT "Characterization of Cucumber mosaic virus strains PHz and PGs isolated RT from Pinellia ternata"; RL Unpublished. XX RN [2] RP 1-3047 RA Chen J., Wang H.; RT ; RL Submitted (15-MAY-2008) to the INSDC. RL Zhejiang Sci-Tech University, Institute of Bioengineering, No.2 Road RL Xiasha, Hangzhou, Zhejiang 310018, P.R. China XX DR MD5; 84caae81e7e17daeb794b017375569d1. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers EU723568-EU723570 represent the complete CC genome of Cucumber mosaic virus strain PHz. XX FH Key Location/Qualifiers FH FT source 1..3047 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Pinellia ternata" FT /strain="PHz" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2007" FT /db_xref="taxon:12305" FT mRNA 76..2652 FT /product="2a protein" FT CDS 76..2652 FT /codon_start=1 FT /product="2a protein" FT /db_xref="GOA:B3GR05" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B3GR05" FT /protein_id="ACE07026.1" FT /translation="MAFSAPTFSLANLLNGSYGVDTPEDVERLRREQREEAAAARRNYE FT PLPAVDVSESVLEDAHTLRTPDGAPVDTVSVEFVTFGAEDYLEKSDDELLIAFETMVKP FT MRVGQLLCPLFNKCLFISSIAMARALLLAPQTSNRPMKCFEDLVAAIYTKSDFYDNDDE FT CEADDNQMNISSRDVPGYSFEPWSRTSGFEPPPLCEACNMIMYQCPCFDFNALKKSCAE FT RTFADDYVIEGLDGVIDNATLLSNLGPFLVPVRCQYEKCPSPGFAIPPNLNRATDRVDI FT NLVQSICDSTLPTHSSYDDTFHQVFVDNADYSIDLDHVRFRQSDLIAKIPDSGHMIPVL FT NTGSGHKRVGTTKEVLTAIKKRNADVPELGHSVNLSRLSKAVAERFFISYINGNSLASS FT NFVNVVSNFHDYMEKWKSSGLSYEDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPV FT PATITYHKKTITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEI FT DLSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRR FT TGDAFTYFGNTIVTMAEFAWCYDTDQFEKLIFSGDDSLGFSILPPVGDPSKFTTLFNME FT AKVMEPSVPYICSKFXLSDEFGNTFSVPDPLREVQRLGTKKIPYSDGDEFLFAHFMSFV FT DRLKFLDRMSQSCIDQLSFFFELKYKKSGEEAALMLGAFKKYTANFQSYQELYYSDRRQ FT CELINSFHCIELRIERSDSIKQRKGNGTERGRKDKRRAPAGSHGGEEETETEVSQEKST FT GTRIQKSQREGTFKSQAATLPTVLSGGCGRTHRALPPCEYGGIARV" FT mRNA 2411..2743 FT /product="2b protein" FT CDS 2411..2743 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:B3GR06" FT /protein_id="ACE07027.1" FT /translation="MELNEGARTNVELQLAHMVEKKKQRRRSLKKNRRERGYKSPSERA FT RSNLRLLRFLPFYRVDVVELTEPYHHVSMVELLESDCPWLSLSAEDFEFDDTDWFAGNE FT WAEGVF" XX SQ Sequence 3047 BP; 756 A; 676 C; 714 G; 899 T; 2 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtgaaattc cctggtttat 60 ccagttcttt tacctatggc tttttctgcc cccacattct cacttgccaa tctcttgaat 120 ggcagttacg gtgtcgacac tcccgaggat gtggagcgtt tgcgacgtga gcaacgcgaa 180 gaggctgctg cggctcgtcg aaactacgag cccctacccg ctgtggatgt cagcgagagt 240 gtcttagagg atgcgcatac cctccgaact ccagatggag ctcccgttga tacggtatct 300 gttgagtttg ttacttttgg tgctgaagat taccttgaaa aatctgacga tgagctcctg 360 atcgcttttg agacgatggt caaacccatg cgtgtcggac aattgttgtg ccctttgttt 420 aataaatgtc tttttatttc cagcatcgct atggccagag ccttgctgtt ggcaccgcaa 480 acatccaacc gacccatgaa gtgttttgaa gacctggtcg cggctattta cactaaatcc 540 gatttctatg ataatgatga cgagtgtgaa gccgacgaca atcagatgaa tatctcgtct 600 cgcgatgtac ccggttactc tttcgaaccg tggtcccgaa cgtctggatt tgaaccccct 660 ccgctctgcg aggcgtgcaa catgatcatg taccagtgcc cgtgttttga ttttaatgct 720 ctaaagaaat cgtgcgctga gaggactttt gccgatgact atgtcatcga aggtttagat 780 ggtgtcattg acaatgcgac tttattgtcc aatttaggcc catttttggt gcctgtgagg 840 tgtcaatatg aaaaatgccc atcacctggt tttgcaattc ctccgaattt aaatcgtgcc 900 actgatcgtg ttgatattaa tttggttcag tccatttgtg actcgactct gcccactcat 960 agtagttacg acgacacttt tcatcaagtg ttcgtcgata acgctgacta ttctatagat 1020 ctggatcacg tcagatttcg acaatctgac cttattgcaa aaattcctga ttctgggcat 1080 atgataccgg ttttgaacac cgggagcggt cacaagagag taggtacaac aaaggaggtt 1140 cttacggcta tcaagaagcg taatgccgac gttccagagc tgggtcattc cgttaatctg 1200 tctaggttga gtaaagctgt ggccgagaga tttttcattt catatattaa tggtaactct 1260 ctggcatcca gtaactttgt taacgttgtc agtaacttcc acgattacat ggaaaaatgg 1320 aagtcatcgg gtctctcgta tgaagatttg ccagatcttc atgctgagaa tttgcaattt 1380 tatgaccaca tgataaaatc cgatgtgaaa cctgtcgtga gcgacacact caacatcgac 1440 agaccggttc cagctactat aacgtaccat aagaagacta taacctccca gttctcacct 1500 ttattcacag cgctatttga gcgcttccag agatgccttc gagaacgcat tattcttcct 1560 gttggcaaaa tttcatccct agagatggcg ggatttgatg ttaaaaataa gcattgtctc 1620 gagattgatt tgtccaaatt tgacaagtct cagggtgaat ttcatttgct gattcaggag 1680 catattctga atggtttagg gtgcccagct ccgataacca aatggtggtg tgatttccac 1740 cggttttctt acatcagaga tcgtagagct ggtgttggta tgcctattag tttccagaga 1800 cgcactggtg acgcgtttac ctattttggc aataccatcg tcaccatggc tgagtttgcc 1860 tggtgttacg acaccgacca attcgaaaaa ttaatattct caggcgatga ttctctgggt 1920 ttttcgattc ttccccctgt tggtgatccg agtaaattca caactctctt caacatggaa 1980 gctaaggtga tggaaccgtc agtaccatac atttgttcga agttcywact ctctgacgag 2040 ttcggtaata cattttccgt tccagatcca ttgcgcgagg ttcagcggtt gggtacaaag 2100 aaaattccct attctgacgg tgatgaattc ttgtttgctc attttatgag ttttgttgat 2160 cgattaaagt ttttagatcg aatgtctcaa tcgtgtatcg atcaactttc tttcttcttt 2220 gagctgaaat acaagaagtc tggggaagag gctgccttaa tgttaggcgc ctttaagaag 2280 tataccgcta atttccaatc ttatcaagaa ctctattatt cagatcgtcg tcagtgcgaa 2340 ctgatcaatt cgtttcattg tatagagttg aggattgagc gttcagattc cattaaacaa 2400 cgaaagggaa atggaactga acgagggcgc aaggacaaac gtcgagctcc agctggctca 2460 catggtggag aagaagaaac agagacggag gtctctcaag aaaaatcgac gggaacgagg 2520 atacaaaagt cccagcgaga gggcacgttc aaatctcagg ctgctacgct tcctaccgtt 2580 ttatcgggtg gatgtggtag aactcacaga gccttaccac catgtgagta tggtggaatt 2640 gctcgagtct gattgccctt ggttatcgtt atcggcggag gatttcgagt ttgatgatac 2700 agactggttc gctggtaacg aatgggcgga gggtgtgttt tgaatctccc ctccctttcc 2760 accctcactt ctgtgcgggt gctgagttgg cagtattgct taaaactgcc tgaagtcatt 2820 aaacgtttcg acgatgaacg ggttgtccat ccagcttacg gctaaaatgg tcagtcgtgg 2880 agaaatccac gccggaggtt tacaaacctc tgaggcgcct ttgaaaccga ctcctgggtt 2940 tcttcggaag gactttgtcc gtgtacttct agcacaagat gctagtgtag ggtacaggtg 3000 ccccccacta cttagtgggg ttccaagaag gagaccagtc gacaatt 3047 //