ID EU723568; SV 1; linear; genomic RNA; STD; VRL; 3356 BP. XX AC EU723568; XX DT 14-JUN-2008 (Rel. 96, Created) DT 14-JUN-2008 (Rel. 96, Last updated, Version 1) XX DE Cucumber mosaic virus strain PHz segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3356 RA Chen J., Wang H.; RT "Characterization of Cucumber mosaic virus strains PHz and PGs isolated RT from Pinellia ternata"; RL Unpublished. XX RN [2] RP 1-3356 RA Chen J., Wang H.; RT ; RL Submitted (15-MAY-2008) to the INSDC. RL Zhejiang Sci-Tech University, Institute of Bioengineering, No.2 Road RL Xiasha, Hangzhou, Zhejiang 310018, P.R. China XX DR MD5; 11fdcb8ea7f09c70d42c21ce681c2118. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers EU723568-EU723570 represent the complete CC genome of Cucumber mosaic virus strain PHz. XX FH Key Location/Qualifiers FH FT source 1..3356 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Pinellia ternata" FT /strain="PHz" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2007" FT /db_xref="taxon:12305" FT mRNA 95..3076 FT /product="1a protein" FT CDS 95..3076 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:B3GR02" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B3GR02" FT /protein_id="ACE07023.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGH FT KVYIRNVLNVKDSEIIRNRYGGKYDLHLTQQELAPHGLAGALRLCETLDCLDFFPRSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMSMRKIILNDPQQFDGRQ FT PDFCTHSAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTLLKGTMMFDGAMMFDDQ FT GVIPELKCQWRKIRSAFSETEDVTPMPGKINSTIFSRVRKFKTMIAFDFIDESTMSYVH FT DWENIKSFLTDQTYSYNGMTYGIERCVIYAGVMTYKIVGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILVSTLRETEEIAMRCYNEKKAWTEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASGISKWFASLTR FT PLRVFFSSVVRALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAFVATQ FT AVTDGKVLAAQKAEKLAEKLAHPVSEVSDSSETSSSASDDTADVCGKEQEVSELDSLSV FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNVRFATGRWMHPVPEGVTYSVGYNERGLGPKSDGELYIVNSECVVCNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACAFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYMKW FT VSQSKVKRSVTSRAIASVTLVDLDPSRFYITMTQADKASLISRAKEMYLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGALNGDLIAAC FT ISRV" XX SQ Sequence 3356 BP; 851 A; 745 C; 809 G; 950 T; 1 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtgaaatta ccctttgaaa 60 aaccctctct tctaatcttt tctttgtaat tcctatggca acgtcctcgt tcaacatcaa 120 tgaactggta gcctcccacg gcgataaagg actgcttgca actgccctcg ttgataagac 180 agctcatgag cagctggagg agcaattaca acatcaacgt agaggccata aggtctacat 240 tcgcaatgtg ctgaatgtaa aggattccga aatcattcgg aaccggtatg gagggaagta 300 cgacctccat cttacccagc aggagttagc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagacttttt ccctcgctca ggtctgcggc aagaccttgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacacaacg tacactgctg 480 ctccccttgt ttgggtatcc gcgataagat gcgccacgcg gaacgtttaa tgagcatgcg 540 caagatcatt ttgaacgatc cacaacagtt cgatggtcgg cagccggatt tttgcactca 600 ttctgctgcg gattgcaaag ttcaagccca ctttgctata tccattcatg gaggatatga 660 tatgggcttt agaggattat gtgaggcgat gaatgcccac ggaaccacac tattgaaggg 720 aacgatgatg ttcgatggcg cgatgatgtt tgacgaccag ggtgttatac ccgaacttaa 780 atgccagtgg aggaagatca ggagcgcttt ctctgaaact gaagacgtca caccgatgcc 840 tggcaagatt aattccacta tattctcccg cgttcgtaag tttaagacta tgatagcttt 900 cgattttatc gatgagtcaa ccatgtcata tgttcatgat tgggagaata taaagtcttt 960 tcttacagac cagacatatt cctataatgg aatgacttat ggcatcgaac gatgtgtcat 1020 ttatgccggt gttatgacgt ataagatcgt tggtgtacct gggatgtgcc cgcccgaact 1080 cattcgacat tgtatttggt tcccctctat caaagactat gttggtctaa agattcccgc 1140 gtctcaggac ttggttgagt ggaaaacagt gcgtatttta gtgtcaacac tacgtgagac 1200 tgaagagatt gctatgagat gttacaatga aaagaaggct tggacggagc aattcaaggt 1260 catcttgggt gttctatccg ccaagtcatc taccattgtt attaatggta tgtccatgca 1320 atctggcgag cggatagata tcaatgatta tcattacatt gggttcgcca ttcttcttca 1380 cacaaaaatg aaatacgaac aactgggaaa aatgtatgat atgtggaatg cttcgggcat 1440 ctcgaagtgg ttcgcttcgt tgactcgccc acttcgagtg tttttctcca gtgtggttcg 1500 cgcattgttc ccaactttga gaccgcgcga ggaaaaggaa tttttaatta aactctccac 1560 cttcgttact tttaatgaag agtgctcatt cgatggtgga gaggaatggg acgtgatatc 1620 atctgctgca ttcgttgcta cgcaggctgt taccgatggg aaagttttgg ctgcgcagaa 1680 agctgagaag ctcgctgaaa agcttgcaca tcccgtaagt gaggtatcgg acagctctga 1740 gacgtcatct tcagcgtcag atgatactgc tgatgtttgt ggaaaggagc aagaagtttc 1800 ggagcttgac tccttatcag tccagacacg ttcccccatc actagagttg ctgaragggc 1860 tactgctatg ttagagtatg ccgcttatga gaaacaattg catgacacta cggtgtccaa 1920 cctgaaacgc atatggaata tggcgggtgg cgatgataaa agaaattccc ttgaaggaaa 1980 tcttaagttt gtgtttgaca catatttcac cgttgatccc atggtgaatg ttcgtttcgc 2040 cacgggccgg tggatgcatc cagtgccaga gggagttacc tattcagttg gttacaacga 2100 acgcggtctc ggtccgaaat cggacggaga gctttatatt gttaacagcg aatgtgttgt 2160 ttgtaatagt gagtctttgt ccgctgttac gcgttcgctt caagctccga ccgggaccat 2220 tagtcaagtt gacggagttg ctggttgtgg gaaaaccaca gcgatcaaat ctatatttga 2280 accgtccact gacatgattg tcaccgccaa taagaaatcc gctcaagatg tgcgtatggc 2340 actttttaaa tcgtcagatt ccaaagaagc gtgcgccttc gtccgaacag ctgattctgt 2400 cctacttaac gaatgtccga ccgttagtag ggttttagtt gacgaggtcg tgttgctaca 2460 ttttggtcaa ttgtgtgccg tcatgtctaa actgaaggca gtgagagcta tatgttttgg 2520 agattcagag caaatcgcct tttcatctcg agatgcctcg tttgacatgc gtttctctaa 2580 gattatccct gatgagacta gtgatgcgga cactacattc cgtagcccac aagacgttgt 2640 gcctcttgtg cgtttaatgg ctacgaaggc ccttccgaaa ggaacccatt caaaatacat 2700 gaaatgggtt tctcaatcta aagtgaaaag gtctgtcacg tctcgcgcca tagctagcgt 2760 gacattggtt gatttggacc cttccaggtt ctatatcacg atgactcagg ctgacaaggc 2820 ttcactgatt tctagggcaa aagagatgta cttaccaaag actttctgga atgaaaggat 2880 taaaaccgtt catgagtctc agggtatttc tgaagaccat gttactttgg taagattaaa 2940 gagcacaaag tgtgacctgt tcaaacagtt ttcttattgt cttgttgctt tgaccagaca 3000 taaggtcaca tttcgctacg aatactgcgg tgctttgaat ggcgatctaa tcgccgcatg 3060 tatttctcgt gtttagcgac ctccctcctt cgggcgggat ctgagttggc ggtaatctac 3120 aaaccgtctg aagtcactat tgtgaacggg ttggtcatcc agctaacggc taaaatgatc 3180 agtcgcatct tctgatgcgc cggaggttta caaacctctg aggcaccttt gaaaccatct 3240 cctaggtttc ttcggaagga cttcggtccg tgtacttcta gcacaccgtg ctagtgtagg 3300 gtacgggtgc cccccactag ttagtggggc tccagcaagg agaccagtcg acaatt 3356 //