ID   EU713857; SV 1; linear; mRNA; STD; VRL; 1547 BP.
XX
AC   EU713857;
XX
DT   29-JUN-2008 (Rel. 96, Created)
DT   29-JUN-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Potato virus Y isolate ABRII2 polyprotein mRNA, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1547
RA   Soheilivand S., Salehi Jouzani G., Shakib A.M., Daneshvare Tekmadash S.,
RA   Fathi Ghareh Baba M., Mousivand M., Akbari Vala S., Sadeghi A., Kowsari M.,
RA   Bagheri O.;
RT   "Preparation of cDNA library of PVY virus and using it in RNAi constructs
RT   leads to virus genes silencing";
RL   Unpublished.
XX
RN   [2]
RP   1-1547
RA   Soheilivand S., Salehi Jouzani G., Shakib A.M., Daneshvare Tekmadash S.,
RA   Akbari Vala S., Sadeghi A., Kowsari M.;
RT   ;
RL   Submitted (10-MAY-2008) to the INSDC.
RL   Microbial Biotechnology and Biosafety, Agriculture Biotechnology Research
RL   Institute of Iran (ABRII), Mahdasht Road, Karaj, Tehran 31535-1897, Iran
XX
DR   MD5; 77ac3d414cc22e307fa8895e391981b9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1547
FT                   /organism="Potato virus Y"
FT                   /strain="N:O"
FT                   /isolate="ABRII2"
FT                   /mol_type="mRNA"
FT                   /country="Iran"
FT                   /PCR_primers="fwd_seq: gcatgtgaggaaaatttaataaagagg,
FT                   rev_seq: ctgtcaaggcttcaaacatccacgcag"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1547
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B3V833"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="UniProtKB/TrEMBL:B3V833"
FT                   /protein_id="ACF05614.1"
FT                   /translation="ACEENLIKRYESLQFVHHQAATSLAKDLKLKGTWKKSLVAKDLII
FT                   AGAVAIGGIGLIYSWFTQSVETVSHQGKNKSKRIQALKFRHARDKRAGFEIDNNDDTIE
FT                   EFFGFAYRKKGKGKGTTVGMGKSSRRFINMYGFDPTEYSFIQFVDPLTGAQIEENVYAD
FT                   IRDIQERFSEVRKKMVENDDIEMQALGSNTTIHAYFRKDWSDKALKIDLMPHNPLKVCD
FT                   KTNGIAKFPERELELRQTGPAVEVDVKDIPAQEVEHEAKSLMRGLRDFNPIAQTVCRLK
FT                   VSVEYGTSEMYGFGFGAYIIANHHLFRSYNGSMEVRSMHGTFRVKNLHSLSVLPIKGRD
FT                   IILIKMPKDFPVFPQKLHFRAPTQNERVCLVGTNFQEKYASSIITETSTTYNIPGSTFW
FT                   KHWIETDNGHCGLPVVSTTDGCLVGIHSLANNKHTTNYYSAFDEDFESKYLRTNEHNEW
FT                   VKSWIYNPDTVLWGPLKLKDSTPKGLFKTTKLVQDLIDHDVVVEQAKHSAWMFEALT"
FT   mat_peptide     59..214
FT                   /product="6 kDa protein 2"
FT   mat_peptide     215..778
FT                   /product="viral genome-linked protein"
FT   mat_peptide     779..1510
FT                   /product="nuclear inclusion protein A"
XX
SQ   Sequence 1547 BP; 507 A; 291 C; 371 G; 378 T; 0 other;
     tgcatgtgag gaaaatttaa taaagaggta tgagtctttg cagttcgttc atcaccaagc        60
     tgcgacgtca cttgcaaagg atctcaaatt gaaggggact tggaagaagt cattagtggc       120
     caaagacttg atcatagcag gcgctgttgc aattggtgga ataggactca tatatagttg       180
     gttcacacaa tcagttgaga ctgtgtctca ccaagggaaa aacaaatcca aaagaattca       240
     agccttgaag tttcgccatg ctcgtgacaa aagggctggc tttgaaattg acaacaatga       300
     tgacacaata gaggaattct ttggatttgc atataggaaa aagggaaaag gtaaaggtac       360
     cacagttggt atgggcaagt caagcaggag gttcatcaac atgtatgggt ttgatccaac       420
     agagtactca ttcatccaat tcgttgatcc actcactggg gcgcaaatag aagagaatgt       480
     ctatgctgac attagagata ttcaagagag atttagtgaa gtgcgaaaga aaatggttga       540
     gaatgatgac attgaaatgc aagccttggg cagtaacacg accatacatg catacttcag       600
     gaaagattgg tctgacaaag ctttgaagat tgatttaatg ccacataatc cactcaaagt       660
     ttgtgacaag acaaatggca ttgccaaatt tcctgagaga gagctcgaac taaggcagac       720
     tgggccagct gtagaagtcg acgtgaagga cataccagca caggaggtgg agcatgaagc       780
     taaatcgctc atgagaggct tgagagactt caacccaatt gcccaaacag tttgtaggct       840
     gaaagtatct gttgaatatg ggacatcaga gatgtacggt tttggatttg gagcatacat       900
     aatagcgaac caccatttgt tcaggagtta caatggttcc atggaggtgc gatccatgca       960
     cggtacattc agggtgaaga atctacacag tttgagcgtt ctgccaatta aaggaaggga      1020
     tatcatcctc atcaaaatgc cgaaagattt ccctgtcttt ccacagaagt tgcatttccg      1080
     agctcctaca cagaatgaaa gagtttgttt ggttggaacc aactttcagg agaagtatgc      1140
     atcgtcgatc atcacagaaa caagcaccac ttataatata ccaggcagca cattctggaa      1200
     gcattggatt gaaacagata atggacactg tggactacca gtggtgagca ccaccgatgg      1260
     atgtctagtc ggaattcaca gtttggcaaa caacaaacac accacgaact actactcagc      1320
     cttcgatgaa gattttgaaa gcaagtatct ccgaaccaat gagcacaatg aatgggtcaa      1380
     gtcttggatt tataatccag acacagtgtt gtggggcccg ttgaaactta aagatagcac      1440
     tcccaaagga ttattcaaaa caacaaagct tgtgcaagat ctaatcgatc atgatgtagt      1500
     ggtggagcaa gctaagcact ctgcgtggat gtttgaagcc ttgacag                    1547
//