ID EU710749; SV 1; circular; genomic DNA; STD; VRL; 2645 BP. XX AC EU710749; XX DT 09-JUN-2008 (Rel. 96, Created) DT 24-OCT-2008 (Rel. 97, Last updated, Version 2) XX DE Tomato leaf distortion virus isolate BR:Pda4:05 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf distortion virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2645 RX DOI; 10.1007/s00705-008-0172-0. RX PUBMED; 18726171. RA Castillo-Urquiza G.P., Beserra J.E.Jr., Bruckner F.P., Lima A.T., RA Varsani A., Alfenas-Zerbini P., Murilo Zerbini F.; RT "Six novel begomoviruses infecting tomato and associated weeds in RT Southeastern Brazil"; RL Arch. Virol. 153(10):1985-1989(2008). XX RN [2] RP 1-2645 RA Castillo-Urquiza G.P., Beserra J.E.A.Jr., Bruckner F.P., Lima A.T.M., RA Varsani A., Zerbini P.A., Zerbini F.M.; RT ; RL Submitted (08-MAY-2008) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 1240fae5b09f7400daa03dd0749154eb. XX FH Key Location/Qualifiers FH FT source 1..2645 FT /organism="Tomato leaf distortion virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="BR:Pda4:05" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="May-2005" FT /db_xref="taxon:536085" FT gene 228..983 FT /gene="CP" FT CDS 228..983 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /note="AV1" FT /db_xref="GOA:B3GN96" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B3GN96" FT /protein_id="ACD93151.1" FT /translation="MPKRDAPWRLMAGTSKVSRSSNFSPRGGGGPKFNKASEWVNRPMY FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(980..1378) FT /gene="Ren" FT CDS complement(980..1378) FT /codon_start=1 FT /gene="Ren" FT /product="replication enhancer protein" FT /note="AC3" FT /db_xref="GOA:B3GN97" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B3GN97" FT /protein_id="ACD93154.1" FT /translation="MDSRTGELITAHQAENGVYIWEITNPLYFKMHRVEDIPFTRTRVY FT HIQIRFNHNLRKALGLHKAFLNFQVWTTSMRASGMTYLSRFRHLVMMYLEQLGVIALNN FT VIRAVRFATDKSYVNHVLENHSIKFKFY" FT gene complement(1125..1514) FT /gene="Trap" FT CDS complement(1125..1514) FT /codon_start=1 FT /gene="Trap" FT /product="trans-activating protein" FT /note="AC2" FT /db_xref="GOA:B3GN98" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B3GN98" FT /protein_id="ACD93153.1" FT /translation="MLNSSSSTPPSIKQQHRIAKKRAIRRRRIDIECGCSIYVHINCIG FT HGFTHRGTHHCTSGREWRLYLGDNKSPVFQDAPSRRHPVHKDQSVSHPDTVQPQPQESV FT GSPQGIPELPSLDDIDESFWDDLFK" FT gene complement(1426..2511) FT /gene="Rep" FT CDS complement(1426..2511) FT /codon_start=1 FT /gene="Rep" FT /product="replication-associated protein" FT /note="AC1" FT /db_xref="GOA:B3GN99" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B3GN99" FT /protein_id="ACD93152.1" FT /translation="MPPPKRFKISSKNYFVTYPHCSLTKEEALAQLKLLNTPTNKKYIK FT ICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQVDGRSARGGQQTSNDAAAEALNASSKEEAMMIIKEKLPEKFLFQYH FT NLSSNLDRIFKKAPDPWVPPFPLSSFTNVPDEMQEWADEYFGRGAAARPVRPMSIIVQG FT DSRTGKTMWARALGSHNYLSGHLDFNSRVYSNDVEYNVIDDVTPHYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLEKEENASLKSWTLYNAKFIFLD FT SPLYQTATQDCEEESNPAATD" FT gene complement(2097..2360) FT /gene="AC4" FT CDS complement(2097..2360) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B3GNA0" FT /protein_id="ACD93155.1" FT /translation="MRMGNLIYTCLYSSKGNTSAQITDSSTWYPHPGQHISIRTFRELN FT HRPTSSPTSIRTVILSNGENSKSTAEVLEEVSKRLTTLQLRR" XX SQ Sequence 2645 BP; 654 A; 586 C; 630 G; 775 T; 0 other; accggatggc cgcgcgattt tttgcccccc gcacgtggcg cttttgtggc cgctggatat 60 ttttctcccg cgcgctgtac tctttaattc taattaaagg tataacttta gtttccacca 120 atgatagtgc gcctgggaag tctagatatg tgcgcgatac ttggggccga agttgttgat 180 caacggctat aaattaaaag aagactgacc acagtcttta attcataatg cctaagcggg 240 atgccccgtg gcgcctgatg gcgggaactt cgaaggttag ccgctcttcc aatttctccc 300 cccgtggagg tggaggccca aagttcaaca aggcctcgga atgggttaac aggcccatgt 360 acaggaagcc caggatatat cggacgctga gaacgcctga tgtccctaga ggctgtgaag 420 ggccctgtaa ggtccagtcc tacgagcagc gtcacgacat ctcacatgtc ggtaaggtga 480 tgtgcatttc tgatgtgaca cgtggtaatg gtattaccca ccgtgtcggt aagcgtttct 540 gcgttaagtc tgtgtacatt ttaggtaaga tatggatgga cgagaacatc aagctgaaga 600 accacacgaa tagtgtcatg ttctggttgg tcagagatcg tagaccgtat ggtactccta 660 tggactttgg ccaggtgttc aatatgtttg acaacgagcc cagcactgct acggtgaaga 720 acgatctccg tgatcgttat caagttatgc acaagttcta cgccaaagtc actggtggtc 780 aatatgccag caatgaacag gctctggtca agaggttctg gaaggtcaac aatcatgtgg 840 tgtacaacca ccaggaagct ggcaagtatg agaatcacac ggagaatgct ttgttactgt 900 atatggcatg tactcatgcc tctaaccctg tgtatgcaac gctaaagatt cgaatttatt 960 tttacgattc gatcaccaat taataaaatt tgaattttat tgaatgattt tctagtacat 1020 gatttacata tgatttgtct gttgcgaatc gaacagctct aattacatta ttaagtgcaa 1080 ttacacctaa ttgttctaag tacatcatta ctaagtgcct aaacctactt aaataagtca 1140 tcccagaagc tctcatcgat gtcgtccaga cttggaagtt caggaatgcc ttgtggagac 1200 ccaacgcttt cctgaggttg tggttgaacc gtatctggat gtgatacact ctggtccttg 1260 tgaacgggat gtcttctact cggtgcatct tgaaatacag gggatttgtt atctcccaga 1320 tatagacgcc attctctgcc tgatgtgcag tgatgagttc cccggtgcgt gaatccatga 1380 cctatgcagt ttatatggac gtatatggag cagccgcact cgatatcaat ccgtcgccgc 1440 cggattgctc tcttcttcgc aatcctgtgt tgctgtttga tagagggggg agtcgaggaa 1500 gatgaattta gcattgtata gtgtccacga cttcagggat gcattttcct ctttctccag 1560 gaaatcttta tagctggccc cctcgccagg attgcaaagc acgattgaag gaattccacc 1620 tttaatttga actggcttgc cgtacttaca atttgactgc cagtcttttt gagcaccaat 1680 caattccttc cagtgcttta actttaaata atgcggggtg acatcatcga tgacgttata 1740 ctcaacgtca tttgagtaaa ccctagaatt gaagtccagg tgtccactca gataattgtg 1800 agaccccaaa gctctggccc acatcgtctt ccccgttcga ctatcacctt ggacgattat 1860 actcatgggt ctcactggcc gcgcagcggc tcctcttcca aaatactcat cggcccattc 1920 ctgcatctcg tcaggaacgt tagtgaagga tgagagggga aacggaggaa cccaaggatc 1980 cggagccttt ttgaatattc tatccaggtt actggatagg ttatggtatt ggaagaggaa 2040 tttttccggc agcttttcct tgataatcat catcgcctct tcctttgatg atgcattcaa 2100 cgcctcagct gcagcgtcgt tagacgtttg ctgacctcct ctagcacttc tgccgtcgac 2160 ttggaattct ccccattcga tagtatcacc gtccttatcg atgtaggact tgacgtcgga 2220 cgatgattta gctccctgaa tgttcggatg gaaatgtgct gacctggatg gggataccaa 2280 gtcgaagaat ctgttatttg tgcactggta tttcccttcg aactgtataa gcacgtgtag 2340 atgaggttcc ccattctcat gcagttctct gcagattttg atatacttct tgttggttgg 2400 ggtgttaagg agtttaagtt gggcaagtgc ttcttctttg gtcagagaac aatgagggta 2460 tgtgacaaaa tagtttttgg aagatatttt aaaccgcttt gggggtggca tatttgtaaa 2520 tatagccttg taccccaatt gctccggctc tcaaaactct atatgaattg gggtaatggg 2580 gtacaatata tagtaaggag ttccataagc tcctaggggc acgtggcggc catccgtata 2640 atatt 2645 //