ID   EU702447; SV 1; linear; genomic RNA; STD; VRL; 1762 BP.
XX
AC   EU702447;
XX
DT   13-MAY-2009 (Rel. 100, Created)
DT   13-MAY-2009 (Rel. 100, Last updated, Version 1)
XX
DE   Grapevine fanleaf virus isolate Du polyprotein gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1762
RX   DOI; 10.1016/j.virusres.2009.01.016.
RX   PUBMED; 19428739.
RA   Liebenberg A., Freeborough M.-J., Visser C.J., Bellstedt D.U., Burger J.T.;
RT   "Genetic variability within the coat protein gene of Grapevine fanleaf
RT   virus isolates from South Africa and the evaluation of RT-PCR, DAS-ELISA
RT   and ImmunoStrips as virus diagnostic assays";
RL   Virus Res. 142(1-2):28-35(2009).
XX
RN   [2]
RP   1-1762
RA   Liebenberg A., Freeborough M.-J., Burger J.T.;
RT   ;
RL   Submitted (06-MAY-2008) to the INSDC.
RL   Genetics, University of Stellenbosch, JC Smuts Building, Van der Bijl
RL   Street, Stellenbosch 7600, South Africa
XX
DR   MD5; 33d7eb37cbcde257be194cf7adcf924b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1762
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera cv. Chardonnay"
FT                   /isolate="Du"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /collection_date="Nov-2007"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..1614
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C4MID4"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C4MID4"
FT                   /protein_id="ACH61799.1"
FT                   /translation="TFSIRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPK
FT                   DCQASRYLGTLNIRDMITDFKGVQYEKWITAGLVMPIFKIVVRLPANAFTGLTWVMSFD
FT                   AYNRITSRITTSADPVYTLSVPHWLIHHKLGTFTCEVNYGELCGHAMWFKSTTFESPRL
FT                   HFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFF
FT                   DLTAVTALRSAGLTLGQVPMVGTTKVYNLNSALVSCVLGVGGTIKGKVHICAPIFYSVV
FT                   LWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLN
FT                   FYAIAGPIAPTGETARLPVVVQIEEIVHPDLSLPSFEDDYFVWVDFSEFTLDREEIEIG
FT                   SRFFDFTSSTCKVAMGENPFAAMIACHGLHSGVLDLKLQWSLNTEFGKSSGSITVTKLV
FT                   GDKAMGLDGPSQVFAIQKLEGTTELLIGNFAGANPNTHFSLYSRWMAIKMDQAKSIKVL
FT                   RVLCKPRPGFSFYGRTSFPV"
FT   mat_peptide     <1..198
FT                   /product="movement protein"
FT                   /note="2B"
FT   mat_peptide     199..1611
FT                   /product="coat protein"
FT                   /note="2C"
FT   3'UTR           1615..>1762
XX
SQ   Sequence 1762 BP; 435 A; 342 C; 442 G; 543 T; 0 other;
     accttctcta tcagaagccg atcacgatca gtgagaattg atagaaatgt tgatctccct        60
     caacttgagg ctgagcccag attgagctca accgtgagag gattagctgg taggggggtg       120
     atttatattc ccaaggattg ccaggcaagt aggtatttgg gtacccttaa tatacgtgat       180
     atgattacgg attttaaggg agtccagtat gaaaagtgga taactgcagg tttagtcatg       240
     cctattttca aaattgttgt taggctaccc gctaacgcgt ttactgggct tacatgggtt       300
     atgagctttg atgcttacaa tcggataact agtagaatca ctactagtgc agatcctgtg       360
     tataccctat ccgtcccaca ctggcttatt catcataagt tgggcacttt tacctgtgaa       420
     gtaaactatg gagaattgtg tggacatgca atgtggttta aatccacaac attcgaatct       480
     ccaaggctac actttacgtg cctgactggg aataataaag aattggcggc ggactggcaa       540
     gctgtcgtcg agttgtatgc agaattggaa gaagccacgt cctttcttgg aaaacccacc       600
     ctggtttttg acccgggtgt tttcaatggc aaatttcaat ttttgacttg ccctcccata       660
     ttctttgatt taacagccgt cacggctctt aggagtgctg ggctgacgtt gggacaggtc       720
     ccaatggttg gcactacaaa ggtttataat ctgaacagcg cccttgtgag ttgtgttttg       780
     ggtgtgggag gcactattaa agggaaggtc cacatttgtg caccaatctt ttatagtgtt       840
     gttctgtggg ttgttagtga gtggaacggg accactatgg attggaatga acttttcaag       900
     tatcccgggg tgtatgtgga agaagatgga agctttgaag ttaagatccg ttctccatat       960
     caccgaacgc ctgctaggct gcttgctggt caaagccaga gggatatgag ctccctaaac      1020
     ttttatgcga tagcaggacc cattgctcct acgggtgaga ctgcgcggct tcctgttgtc      1080
     gtgcaaattg aggagattgt gcacccagat ctttccttac caagttttga agatgattat      1140
     ttcgtgtggg ttgacttttc tgagtttact ctcgatagag aagaaattga gattggatct      1200
     cgtttctttg atttcacttc aagtacttgt aaggtagcca tgggagagaa tccatttgct      1260
     gcaatgattg cctgtcacgg attgcatagt ggtgttttag acctcaagct tcagtggagt      1320
     ttaaataccg aatttggcaa gagcagtggg agcattaccg tcacgaagct ggtgggtgat      1380
     aaggccatgg gcctggatgg accgtctcaa gtttttgcca tacaaaagct ggagggaacc      1440
     acagaattgt taattgggaa ctttgcagga gcaaacccaa atacccattt ctccctctat      1500
     agccgatgga tggcaatcaa aatggaccaa gcaaagagca ttaaagtgct ccgagtcttg      1560
     tgtaagcctc gtccaggttt cagtttctat ggaaggacca gcttcccagt ctagggtatc      1620
     tgactttaaa agacccatgt acacatagtt cctttctttg ctttggtcgt gtgtcttgtt      1680
     ttgtgttata atttgcttta acttgtttac tgctttggtg tgtttaattt cacgctttta      1740
     gtggcgacag tgtgttgttt gt                                               1762
//