ID   EU702446; SV 1; linear; genomic RNA; STD; VRL; 1762 BP.
XX
AC   EU702446;
XX
DT   01-JAN-2009 (Rel. 98, Created)
DT   10-MAY-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate D12 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1762
RX   DOI; 10.1016/j.virusres.2009.01.016.
RX   PUBMED; 19428739.
RA   Liebenberg A., Freeborough M.-J., Visser C.J., Bellstedt D.U., Burger J.T.;
RT   "Genetic variability within the coat protein gene of Grapevine fanleaf
RT   virus isolates from South Africa and the evaluation of RT-PCR, DAS-ELISA
RT   and ImmunoStrips as virus diagnostic assays";
RL   Virus Res. 142(1-2):28-35(2009).
XX
RN   [2]
RP   1-1762
RA   Liebenberg A., Freeborough M.-J., Burger J.T.;
RT   ;
RL   Submitted (06-MAY-2008) to the INSDC.
RL   Genetics, University of Stellenbosch, JC Smuts Building, Van der Bijl
RL   Street, Stellenbosch 7600, South Africa
XX
DR   MD5; 80d107e1906126770484c9502394af17.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1762
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera cv. Chardonnay"
FT                   /isolate="D12"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /collection_date="Nov-2007"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..1614
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B8QT93"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B8QT93"
FT                   /protein_id="ACH61798.1"
FT                   /translation="TFSIRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYIPK
FT                   DCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFKIVVRLPANAFTGLTWVMSFD
FT                   AYNRITSRITASADPVYTLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRL
FT                   HFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFF
FT                   DLTAVTALKSAGLTLGQVPMVGTTKVYNLNSALVSCVLGMGGTIKGEVHICAPIFYSIV
FT                   LWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLN
FT                   FYAIAGPIAPSGETARLPVVVQIEEIVRPDLSLPSFEDDYFVWVDFSEFTLDREEIEIG
FT                   SRFFDFTSSTCKVAMGENPFAAMIACHGLHSGILDLKLQWSLNTEFGKSSGSITITKLV
FT                   GDKAMGLDGPSQVFAIQRLEGTTDLLIGNFAGANPNTHFSLYSRWMAIKMDQAKSIKVL
FT                   RILCKPRPGFSFYGRTSFPV"
FT   mat_peptide     <1..198
FT                   /product="movement protein"
FT                   /note="2B"
FT   mat_peptide     199..1611
FT                   /product="coat protein"
FT                   /note="2C"
FT   3'UTR           1615..>1762
XX
SQ   Sequence 1762 BP; 441 A; 334 C; 433 G; 554 T; 0 other;
     accttctcta tcagaagccg ctcaagatct gtgaggattg atagaaatgt tgatcttcca        60
     caacttgagg ctgagcccag gttgagctca accgtgagag gactagctgg tagaggagtg       120
     gtctacattc ctaaggattg tcaggcaaat aggtacttgg gtaccttgaa tatacgtgat       180
     atgatctcag atttcaaggg tgttcagtac gaaaagtgga taactgcagg actagtcatg       240
     cctactttta agatagttgt taggctacct gcaaatgctt tcactggatt gacgtgggtg       300
     atgagctttg atgcttataa tcggataact agtagaatta ctgctagtgc agatcctgta       360
     tacaccctgt cagtccctca ttggcttatc caccataagt tgggcacgtt ttcatgcgag       420
     atagactatg gagaattgtg tggccacgcc atgtggttta agtccacaac atttgaatct       480
     cctaggttac atttcacgtg tttaacgggt aacaacaaag aactagcggc agactggcaa       540
     gctgtcgtag agttgtatgc cgagttggaa gaggccacct cttttcttgg aaaaccaact       600
     ttggtttttg atccaggtgt tttcaatggt aaattccaat ttcttacttg ccctcccata       660
     ttttttgatt tgacagccgt tacggctctc aagagtgctg ggctgacatt gggtcaggtc       720
     ccaatggttg gcactaccaa ggtttataat ctgaacagtg ctcttgtcag ttgtgttctg       780
     ggtatgggag gtactattaa aggggaggtt cacatttgtg cgccaatctt ttatagtatt       840
     gttttatggg ttgtcagcga gtggaacggg accactatgg actggaatga acttttcaaa       900
     tatcccggag tgtatgtgga agaagacgga agctttgaag ttaaaatccg ctctccatat       960
     caccgaacgc ctgctagatt gcttgctggt caaagtcaaa gggatatgag ctccctaaac      1020
     ttttatgcaa tagcaggacc tattgctcct tcgggtgaga ctgcacgact ccctgttgtc      1080
     gtgcagattg aggaaattgt gcgcccagac ctttccttac cgagttttga agatgattat      1140
     ttcgtgtggg tagacttctc tgagtttact cttgataggg aagaaattga gattggatct      1200
     cgtttctttg acttcacttc aagcacttgt aaggttgcta tgggagagaa cccatttgct      1260
     gcgatgattg cctgccatgg attgcacagt ggtattttag atctcaaact tcagtggagt      1320
     ttaaataccg agttcggcaa aagtagcggg agcatcacta ttacgaagct ggtaggtgat      1380
     aaggccatgg gcctggatgg accgtctcaa gtttttgcga tacaaagact ggagggaacc      1440
     accgatttgt tgattgggaa ttttgcagga gcaaacccaa acacccattt ctccctctac      1500
     agtcgatgga tggcaattaa aatggatcaa gcaaagagta tcaaggtact ccggatcttg      1560
     tgtaagcctc gtccaggttt cagtttttat ggaagaacca gtttcccagt ctagggtatc      1620
     tgactttaaa agacccatat gtacgtggtt atttcttttg ttttgattgt gtacattgct      1680
     ttgtgttata atttgtttta acttgtttac tgctttagtg tgtttaattt catgctttta      1740
     gtggcgacag tgtgttgttt gt                                               1762
//