Dbfetch
ID EU685327; SV 1; linear; genomic DNA; STD; VRL; 1048 BP. XX AC EU685327; XX DT 29-DEC-2008 (Rel. 98, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE East African cassava mosaic Cameroon virus isolate EACMCV-CM[NG:Cc:03] DE replication enhancer protein (AC3) and transcriptional activator protein DE (AC2) genes, complete cds; and replication protein (AC1) gene, partial cds. XX KW . XX OS East African cassava mosaic Cameroon virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1048 RX DOI; 10.1007/s00705-008-0169-8. RX PUBMED; 18661095. RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava Kumar P., Dixon A.G., RA Hughes J., Naidu R.A.; RT "Alternate hosts of African cassava mosaic virus and East African cassava RT mosaic Cameroon virus in Nigeria"; RL Arch. Virol. 153(9):1743-1747(2008). XX RN [2] RP 1-1048 RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava-Kumar P., Dixon A.G.O., RA Hughes J., Rayapati N.A.; RT ; RL Submitted (05-APR-2008) to the INSDC. RL Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, RL WA 99350, USA XX DR MD5; 0c0401287c2436d8bb6b9ebd6c84da8b. XX FH Key Location/Qualifiers FH FT source 1..1048 FT /organism="East African cassava mosaic Cameroon virus" FT /segment="DNA-A" FT /host="Combretum confertum" FT /isolate="EACMCV-CM[NG:Cc:03]" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /db_xref="taxon:223262" FT gene complement(50..454) FT /gene="AC3" FT CDS complement(50..454) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B8QSH1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8QSH1" FT /protein_id="ACF42174.1" FT /translation="MDLRTGEDIGALQWRNGAFIWEIPNPLYFTILNHDSMPFNMNHDI FT IDVQIRFNYNLRKALGMHKCFLNFRIWTRLHPQTWRFFKTFRTQVMKYLTNLGVISIST FT VIDAVHHVLHMVFVGTLSVSQDHAIKFNIY" FT gene complement(195..602) FT /gene="AC2" FT CDS complement(195..602) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:B8QSH2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8QSH2" FT /protein_id="ACF42173.1" FT /translation="MRSSSPSQSHSSPPPIKARHRQAKIRAPRRRRIDLTCGCSIYRSI FT NCHNHGFTHRGRHWCSSMEEWRLYLGDSKSPIFHNPQPRQHAVQHESRHNRCPDSVQLQ FT PEESTGDAQVFSQLPDLDSFTSSDLAFLQNL" FT gene complement(656..>1048) FT /gene="AC1" FT CDS complement(656..>1048) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:B8QSH7" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8QSH7" FT /protein_id="ACF42175.1" FT /translation="SPFLSSSFTQVPEEIEVWVSENICRPAARPWRPISIVLEGDSRTG FT KTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLEHFEEFVGAQRDWQSTT FT KFGKPIQIKGGIPPIFLCHPGLQFVL" XX SQ Sequence 1048 BP; 276 A; 217 C; 257 G; 298 T; 0 other; tgtacgctac gcttaaaata cgcatctatt tctatgatgc agtgacaaat taataaatat 60 taaatttgat tgcatgatct tgtgatacag atagggttcc cacaaaaacc atatgcaata 120 catgatgcac tgcatcaatt acagttgaaa tcgaaataac acctaaatta gtgagatatt 180 tcatgacttg tgtcctaaag gttttgaaga aacgccaagt ctgaggatgt aaacgagtcc 240 agatccggaa gttgagaaaa cacttgtgca tccccagtgc tttcctcagg ttgtagttga 300 accgaatctg gacatcgatt atgtcgtgat tcatgttgaa cggcatgctg tcgtggttga 360 ggattgtgaa atatagggga tttggaatct cccagataaa ggcgccattc ctccattgaa 420 gagcaccaat gtcttcccct gtgcgtaaat ccatggttgt gacaattaat gctgcgatag 480 atggaacagc cacaagttag gtcgatgcgt cgacgtctag gtgctctgat cttagcttgc 540 ctgtgcctgg ctttgatcgg tggaggagaa gagtggctct gtgagggaga cgaagagcgc 600 attcttgatc gcccaatgct ttagattgga attcttgtcc tcgtctaggt attctttata 660 ggacgaattg gaggcccgga tggcataaga agatgggggg aatcccacct ttaatttgaa 720 tgggctttcc gaattttgtg gttgattgcc aatctcgttg ggcccccacg aactcttcga 780 aatgctctag ataatgcggg tctacgtcgt caatgacgtt gtaccatgcg tcgtttgaat 840 atatcttggg agacagatcc aggtgtccac atagatagtt atgtgggccc agagatcggg 900 cccacatcgt cttcccggtt cggctatcac cttcgagaac aatactgatc ggtctccatg 960 gccgcgcagc gggacggcat atattttcgg atacccatac ctctatttcc tctgggactt 1020 gcgtaaatga tgatgataaa aacggact 1048 //