ID   EU685325; SV 1; circular; genomic DNA; STD; VRL; 2781 BP.
XX
AC   EU685325;
XX
DT   29-DEC-2008 (Rel. 98, Created)
DT   29-DEC-2008 (Rel. 98, Last updated, Version 1)
XX
DE   African cassava mosaic virus isolate ACMV-[NG:Sb:07] segment DNA-A,
DE   complete sequence.
XX
KW   .
XX
OS   African cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2781
RX   DOI; 10.1007/s00705-008-0169-8.
RX   PUBMED; 18661095.
RA   Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava Kumar P., Dixon A.G.,
RA   Hughes J., Naidu R.A.;
RT   "Alternate hosts of African cassava mosaic virus and East African cassava
RT   mosaic Cameroon virus in Nigeria";
RL   Arch. Virol. 153(9):1743-1747(2008).
XX
RN   [2]
RP   1-2781
RA   Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava-Kumar P., Dixon A.G.O.,
RA   Hughes J., Rayapati N.A.;
RT   ;
RL   Submitted (05-APR-2008) to the INSDC.
RL   Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser,
RL   WA 99350, USA
XX
DR   MD5; 35691f3721d8b31ca462240e5f9d79b6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2781
FT                   /organism="African cassava mosaic virus"
FT                   /segment="DNA-A"
FT                   /host="Glycine max"
FT                   /isolate="ACMV-[NG:Sb:07]"
FT                   /mol_type="genomic DNA"
FT                   /country="Nigeria"
FT                   /db_xref="taxon:10817"
FT   gene            136..477
FT                   /gene="AV2"
FT   CDS             136..477
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="pre-coat protein"
FT                   /db_xref="GOA:B8QSG0"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG0"
FT                   /protein_id="ACF42212.1"
FT                   /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDIYEPNTLGHDLVRDL
FT                   VSVIRARNYVEATRRYHHFHARLEGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHV
FT                   QKAHDVQDV"
FT   gene            complement(268..639)
FT                   /gene="AC5"
FT   CDS             complement(268..639)
FT                   /codon_start=1
FT                   /gene="AC5"
FT                   /product="unknown"
FT                   /db_xref="GOA:B8QSG1"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG1"
FT                   /protein_id="ACF42211.1"
FT                   /translation="MDLIQNLFPTLCVSPGPRVTSLITLQIPRCFTSSLCSNDWTLHGP
FT                   SQPLGMSGLLYILYIMGFLYMGLFIQARFRFVTWTVGAVARFLYGLSKFSLRRTFEPGV
FT                   EMMISPGRFDIITSPDDRD"
FT   gene            296..1075
FT                   /gene="AV1"
FT   CDS             296..1072
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B8QSG2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG2"
FT                   /protein_id="ACF42207.1"
FT                   /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW
FT                   MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH
FT                   RVGKRFCIKSIYILGKIWMDEKIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN
FT                   EPSTATLKHDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYSHQEAGKYE
FT                   NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN"
FT   gene            complement(803..1006)
FT                   /gene="AC5_4"
FT   CDS             complement(803..1006)
FT                   /codon_start=1
FT                   /gene="AC5_4"
FT                   /product="unknown"
FT                   /note="truncated"
FT                   /db_xref="GOA:B8QSG3"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG3"
FT                   /protein_id="ACF42213.1"
FT                   /translation="MSTCHVQKQSILCVILVLPCLLMTICHVMIQPVKPFHQRLLLHAR
FT                   WTTNNSGMKFPQHLKPIPQIVL"
FT   gene            complement(1069..1473)
FT                   /gene="AC3"
FT   CDS             complement(1069..1473)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:B8QSG4"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG4"
FT                   /protein_id="ACF42210.1"
FT                   /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI
FT                   ITVQVRFNHNLRKELGIHKCFLNFRIWTTLRPQTGLFLRVFRYQVLKYLDTMGVISINN
FT                   VIRAAAHVLFNVIEKTIDCQLTHEIKFNVY"
FT   gene            complement(1214..1621)
FT                   /gene="AC2"
FT   CDS             complement(1214..1621)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:B8QSG5"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG5"
FT                   /protein_id="ACF42209.1"
FT                   /translation="MQSSSPSQNHSTQVPIKASHRQFKKRAIRRRRVDLVCGCSYYLHI
FT                   NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ
FT                   PEEGAGDSQMFSQLQDLDDLTASDWSFLKGL"
FT   gene            complement(1530..2606)
FT                   /gene="AC1"
FT   CDS             complement(1530..2606)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication protein"
FT                   /db_xref="GOA:B8QSG6"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG6"
FT                   /protein_id="ACF42206.1"
FT                   /translation="MRTPRFRVQAKNVFLTYPKCSLPKEHLLSFLQTLSLPSNPKFIKI
FT                   CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTNFHPNIQGAKSSSDVKSYLD
FT                   KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNIIRELVPKDFVLQFHN
FT                   LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVIEGDS
FT                   RTGKTMWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ
FT                   SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEDKQEALKAWALKNAIFITLTEPLY
FT                   SGSNQSQPQTIQEASHPA"
FT   gene            complement(2162..2701)
FT                   /gene="AC4"
FT   CDS             complement(2162..2701)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="AC4 protein"
FT                   /note="host activation protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:B8QSG7"
FT                   /protein_id="ACF42208.1"
FT                   /translation="MPFGDTYIMSPINRRRCSRVSLVECLQLTWSKCELLVLEFKPRMS
FT                   FSHTQSVLFPKNTYCHSFKHYLSHQTLSSLKSVESCIRMGNLTCMPSSNSRARSRLRTI
FT                   VSSIVYTQAVAPISTPTFKVPNQAQMSSPIWIRTATPSNGDNFRSMDDLLEAVNNPRMM
FT                   LTPKRLTAAVSPKLLI"
XX
SQ   Sequence 2781 BP; 748 A; 564 C; 696 G; 773 T; 0 other;
     accggttggc cccgcccccc tctaaacgtg gtccccgcgc actatttatg tcggccaatc        60
     aagcggtagc gttaaaggtt agttaatagt ggtggaccac tatatactta cgggcgaagt       120
     tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg       180
     cttaggtgta tgcttgcaat taaatatttg caggccttag aggatatata cgagcccaat       240
     acgttgggcc acgatcttgt tagagatcta gtctcggtca tcagggctcg taattatgtc       300
     gaagcgacca ggagatatca tcatttccac gccaggctcg aaggttcgtc gaaggctgaa       360
     cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa       420
     acgggcctgg atgaacaggc ccatgtacag aaagcccatg atgtacagga tgtatagaag       480
     cccagacata cctaggggct gtgaaggccc atgtaaggtc cagtcgtttg agcagaggga       540
     tgatgtgaag caccttggta tctgtaaggt gattagtgat gtgacacgtg ggcctgggct       600
     gacacacaga gtcggaaaga ggttttgtat caagtccatt tacattctgg gtaagatctg       660
     gatggatgaa aagattaaga agcagaatca cacgaataat gtgatgtttt acctgcttag       720
     ggatagaagg ccgtatggca atacgcccca agactttggg cagatattta acatgtttga       780
     taatgagccc agtactgcaa cattaaagca cgatttgagg gataggtttc aggtgttgag       840
     gaaatttcat gccactgtta ttggtggtcc atctggcatg aaggagcagg cgttggtgaa       900
     aaggttttac aggttgaatc atcacgtgac atatagtcat caagaggcag ggaagtacga       960
     gaatcacaca gagaatgctt tgcttttgta catggcatgt actcatgcct ccaatcctgt      1020
     atatgctacg ttgaaaatac gtatatactt ctacgacagt ataggcaatt aataaacatt      1080
     gaattttatt tcatgagtca actgacagtc aatagttttt tcaattacat tgaacaaaac      1140
     atgagcagca gctctaatta cattgttaat tgagataaca cccatagtat ccaagtattt      1200
     aagtacttgg tatctaaaga cccttaagaa aagaccagtc tgaggccgta aggtcgtcca      1260
     gatcctgaag ttgagaaaac atttgtgaat ccccagctcc ttcctcaggt tgtgattgaa      1320
     tcgaacctgg actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt      1380
     gattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg      1440
     agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggagataat      1500
     atgaacagcc acagacaaga tccactctcc tacgccggat ggctcgcttc ttgaattgtc      1560
     tgtggctggc tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca      1620
     ttctttaatg cccaggcctt tagcgcttct tgcttgtcct cgtccaggaa ttctttatag      1680
     gacgaggtag gtcctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaacg      1740
     ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag      1800
     tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcagc attattgaag      1860
     acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc      1920
     cacatcgtct tccctgttct gctatcacct tctattacaa tactattagg tctccatggc      1980
     cgcgcagcgg aatccctaac attatcagcg acccattctt caagttcatc aggaacttgg      2040
     tcaaaggaag aacatgggaa gggagaaaca taaggagctg gtggctcctg gaaaatccta      2100
     tctaaattac tatttagatt atgaaactga agtacaaagt cctttgggac caattctcta      2160
     attatattaa gagcttcgga cttactgccg ctgttaagcg ctttggcgta agcatcattc      2220
     gcggattgtt gaccgcctct agcagatcgt ccatcgatct gaaattgtcc ccattcgacg      2280
     gtgtcgccgt ccttatccag ataggacttg acatctgagc ttgatttggc accttgaatg      2340
     ttggggtgga aattggtgct acagcttggg tgtacacaat cgaagagacg attgttcgta      2400
     atcgtgatct tgccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc      2460
     agctctcgac agattttaat gaacttaggg tttgatggga gagatagtgt ttgaaggaat      2520
     gacagtaggt gttctttggg aagagaacac tttgggtatg tgagaaagac attcttggct      2580
     tgaactctaa aacgaggagt tcgcattttg accaagtcaa ttggagacac tcaactagag      2640
     acactcttga gcatctcctc ctgttaattg gagacattat ataggtgtct ccaaatggca      2700
     ttcttgtaat aagtcgaact ttaatttgaa tgaaaaggct caaaaggcgc ggaacaccca      2760
     cggggccaac cgtataatat t                                                2781
//