ID EU685323; SV 1; circular; genomic DNA; STD; VRL; 2800 BP. XX AC EU685323; XX DT 29-DEC-2008 (Rel. 98, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE East African cassava mosaic Cameroon virus isolate EACMCV-CM[NG:So:03] DE segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic Cameroon virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2800 RX DOI; 10.1007/s00705-008-0169-8. RX PUBMED; 18661095. RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava Kumar P., Dixon A.G., RA Hughes J., Naidu R.A.; RT "Alternate hosts of African cassava mosaic virus and East African cassava RT mosaic Cameroon virus in Nigeria"; RL Arch. Virol. 153(9):1743-1747(2008). XX RN [2] RP 1-2800 RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava-Kumar P., Dixon A.G.O., RA Hughes J., Rayapati N.A.; RT ; RL Submitted (05-APR-2008) to the INSDC. RL Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, RL WA 99350, USA XX DR MD5; 2056878ee2a5cba5e9b3bd082fdc77cd. XX FH Key Location/Qualifiers FH FT source 1..2800 FT /organism="East African cassava mosaic Cameroon virus" FT /segment="DNA-A" FT /host="Senna occidentalis" FT /isolate="EACMCV-CM[NG:So:03]" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /db_xref="taxon:223262" FT gene 173..520 FT /gene="AV2" FT CDS 173..520 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B8QSE5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8QSE5" FT /protein_id="ACF42164.1" FT /translation="MWNPLVNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYGEATRRYNNLNTRIQGAEEAELRQPIHEPCGCPYCPRHQKQNMGPQAHVS FT EAQDVQDVSKP" FT gene 333..1109 FT /gene="AV1" FT CDS 333..1106 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B8QSE6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B8QSE6" FT /protein_id="ACF42160.1" FT /translation="MAKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT HRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSEVTRGSGITHR FT VGKRLCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDYRDRFQVLRKFHATVVGGPSGMKEQALVKRFFRINNHIVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(363..587) FT /gene="AC5_4" FT CDS complement(363..587) FT /codon_start=1 FT /gene="AC5_4" FT /product="unknown" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B8QSE7" FT /protein_id="ACF42163.1" FT /translation="MLHIISLFIRLNLTWAFTALRDVRASIHPVHLGLPIHGPVGPYFA FT SGDADSRGNHTVRVWAVEVQPPPHLGYGC" FT gene complement(1103..1507) FT /gene="AC3" FT CDS complement(1103..1507) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B8QSE8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8QSE8" FT /protein_id="ACF42162.1" FT /translation="MDLRTGEDIGALQWRNGAFIWEIPNPLYFTILNHNSMPFNMNHDI FT IDVQIRFNYNLRKALGMHKCFLNFRIWTRLHPQTWRFFKTFRTQVMKYLTNLGVISIST FT VIDAVHHVLNIVFVGTLSVSQDHAIKFNIY" FT gene complement(1248..1655) FT /gene="AC2" FT CDS complement(1248..1655) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:B8QSE9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8QSE9" FT /protein_id="ACF42161.1" FT /translation="MRSSSPSQSHSSPPPIKARHRQAKIRAPRRRRIDLTCGCSIYRSN FT NCHNHGFTHRGRHWCSSMEEWRLYLGDSKSPIFHNPQPQQHAIQHESRHNRCPDSVQLQ FT PEESTGDAQVFSQLPDLDSFTSSDLAFLQNL" FT gene complement(1585..2643) FT /gene="AC1" FT CDS complement(1585..2643) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:B8QSF0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8QSF0" FT /protein_id="ACF42159.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLAKEEALSQLKAISYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFIDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEDIEVWVSENICRPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLDEDKNSNLKNWAIKNALFISLTEPL FT FSSTDQSQAQAS" FT gene complement(2510..2788) FT /gene="AC4" FT CDS complement(2510..2788) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="host activation protein" FT /db_xref="UniProtKB/TrEMBL:B8QSF1" FT /protein_id="ACF42165.1" FT /translation="MAANIRHSNFEWRSTYLHICHWGTSYIMAPIPPFPWSFEWPPIQN FT DSKYAESRSFSNKCQKLFHNLSPMLLSKGRGPFPIKSHFLPDEYQIH" XX SQ Sequence 2800 BP; 750 A; 550 C; 710 G; 790 T; 0 other; accggatggc cgcgcccgaa aaaagcaggt gggccttatg acagtccgcg tccgcaaaag 60 aaagtggtcc ccgcgcacgc atgtttgtcg gccaataata tttgcgcctt gaatgctaga 120 tattgagttt tgactttata tacttcgtca cgaagtagtt gagcgcgtca aaatgtggaa 180 tccgttagtt aacgattttc cggaaaccgt tcacggtttc cgttcgatgc ttgctgttaa 240 atacctgtta catctggaac aggaatatga tcgcggtact gtcggggctg agtatatacg 300 tgatctaata ggggtgctac ggtgtaagag ttatggcgaa gcgaccagga gatataataa 360 tctcaacacc cgtatccaag gtgcggagga ggctgaactt cgacagccca tacacgaacc 420 gtgtggttgc ccctactgtc cgcgtcacca gaagcaaaat atgggcccac aggcccatgt 480 atcggaagcc caagatgtac aggatgtatc gaagccctga cgtccctaag ggctgtgaag 540 gcccatgtaa ggttcagtct tatgaacaga gagatgatgt gaagcatact ggtatagtcc 600 gatgtgtcag tgaagttacg cgtgggtcag gcattaccca tagagttggg aagaggttgt 660 gtgtgaagtc catatatata ttgggcaaga tctggatgga tgagaatatc aagaagcaaa 720 atcatacgaa ccatgttatg ttttttctcg ttcgagatag aaggccttat gggccgagtc 780 ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctacgact gcaactgtga 840 agaatgatta tagggaccgg tttcaggtgt tacgtaaatt ccatgcgact gtagttggtg 900 gaccctcagg gatgaaggaa caagctttgg ttaagaggtt ttttaggatc aataatcata 960 tagtgtataa tcatcaggaa caggccaagt atgagaatca taccgagaat gcgttgttat 1020 tgtatatggc atgtacacat gcctcaaatc ctgtgtacgc tacgcttaaa atacgcatct 1080 atttctatga tgcagtgaca aattaataaa tattaaattt gattgcatga tcttgcgata 1140 cagatagggt tcccacaaaa actatattca atacatgatg cactgcatct attacagttg 1200 aaatcgaaat aacacctaaa ttagtgagat atttcatgac ttgtgtccta aaggttttga 1260 agaaacgcca agtctgagga tgtaaacgag tccagatccg gaagttgaga aaacacttgt 1320 gcatccccag tgctttcctc aggttgtagt tgaaccgaat ctggacatct attatgtcgt 1380 gattcatgtt gaatggcatg ctgttgtggt tgaggattgt gaaatatagg ggatttggaa 1440 tctcccagat aaaggcgcca ttcctccatt gaagagcacc aatgtcttcc cctgtgcgta 1500 aatccatggt tgtgacaatt attgctgcga tagatggaac agccacaagt taggtcgatg 1560 cgtcgacgtc taggtgctct gatcttagct tgcctgtgcc tggctttgat cggtggagga 1620 gaagagtggc tctgtgaggg agatgaagag cgcattcttg atcgcccaat tctttagatt 1680 ggaattcttg tcctcgtcta ggtattcttt ataggacgaa ttggggcccg gattgcataa 1740 gaagatggtg ggaatcccac ctttaatttg aatgggcttt ccgtattttg tgtttgattg 1800 ccaatctcgt tgggccccca tgaactcttt gaaatgcttt agataatgcg ggtctacgtc 1860 gtcaatgacg ttgtaccatg cgtcgtttga atatatcttg ggagacagat ccaggtgtcc 1920 acatagatag ttatgtgggc ccagggatcg ggcccacatc gtcttcccgg ttcgactatc 1980 accttctaga acaatactga tcggtctcca tggccgcgca gcgggacggc atatattttc 2040 ggatacccat acttctatgt cctcggggac ttgcgtaaat gaggatgata agaacggact 2100 aacgtaagtt tgtggcggag cctggaagat tcgatccgcg ttagcagaga tgttatggaa 2160 ctgtaaaaaa aaggactttg gatccttttc tttgataatt tgaagggctt ctgatttaga 2220 agaagcattc aacgcttctg catatacctg agctaaatgc tggccctccc ccctggcact 2280 tctggcatcg acttggaaaa ttccatcgtc aataaattcc cctccctttt caatgtaagc 2340 cttgacatcg gacgatgatt tagctccctg gatgttcgga tggaaatgtg ttgatcggga 2400 tggggaaatg agatcgaaga atctggggtt ggtacattgg aacttgcctt cgaattggat 2460 gagaacatgg agatgaggca ccccatcctg atggagttct ctgcaaaccc taatgaattt 2520 gatattcgtc gggtaagaaa tggcttttaa ttgggaaagg gcctcttcct ttgctaagga 2580 gcatcgggga taggttatga aataattttt ggcatttatt tgaaaacgac cggctctcgg 2640 catatttgct gtcgttttgt atcgggggcc actcaaaact ccaggggaac ggtggaatgg 2700 gggccattat ataggatgtc ccccaatggc atatgtgtaa ataggtagac ctccattcaa 2760 aatttgaatg gcgaatattg gcggccatcc gattaatatt 2800 //